RNA–Protein interactions for RNA: YGL048C

RPT6, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT6, Length 1,218 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT6YGL048C EDC1P53080 175 aaPredicted RBP3.37□□□□□ -1.87
RPT6YGL048C YGL041C-BQ3E750 60 aa3.37□□□□□ -1.87
RPT6YGL048C YNL042W-BQ3E7Z2 85 aa3.36□□□□□ -1.87
RPT6YGL048C YJL144WP47009 104 aa3.35□□□□□ -1.87
RPT6YGL048C YMR230W-AQ3E7B5 62 aa3.35□□□□□ -1.87
RPT6YGL048C RPS30AP0CX33 63 aaKnown RBP3.34□□□□□ -1.87
RPT6YGL048C RPS30BP0CX34 63 aaKnown RBP3.34□□□□□ -1.87
RPT6YGL048C MVB12P42939 101 aa3.34□□□□□ -1.87
RPT6YGL048C MRPS12P53732 153 aa3.34□□□□□ -1.87
RPT6YGL048C YBL039W-BP0C268 59 aa3.32□□□□□ -1.88
RPT6YGL048C YHR007C-AQ07074 71 aa3.32□□□□□ -1.88
RPT6YGL048C Q0032Q9ZZX7 96 aa3.32□□□□□ -1.88
RPT6YGL048C ATP17Q06405 101 aa3.3□□□□□ -1.88
RPT6YGL048C RPL29P05747 59 aaPredicted RBP3.29□□□□□ -1.88
RPT6YGL048C YLL006W-AQ3E814 58 aa3.29□□□□□ -1.88
RPT6YGL048C HUB1Q6Q546 73 aa3.28□□□□□ -1.88
RPT6YGL048C YNL190WP53872 204 aa3.27□□□□□ -1.89
RPT6YGL048C YOR034C-AQ3E735 80 aa3.27□□□□□ -1.89
RPT6YGL048C YNL122CP53921 115 aaPredicted RBP3.22□□□□□ -1.89
RPT6YGL048C DDR2P89113 61 aa3.2□□□□□ -1.9
RPT6YGL048C YLR255CO13574 117 aa3.19□□□□□ -1.9
RPT6YGL048C YBR230W-AQ3E762 66 aa3.19□□□□□ -1.9
RPT6YGL048C YOL097W-AQ3E7Y9 61 aa3.17□□□□□ -1.9
RPT6YGL048C YJL127C-BQ3E828 52 aa3.17□□□□□ -1.9
RPT6YGL048C YBR201C-AQ2V2Q3 67 aa3.13□□□□□ -1.91
RPT6YGL048C YMR001C-AQ8TGS9 76 aa3.13□□□□□ -1.91
RPT6YGL048C YJL009WP47078 108 aa3.12□□□□□ -1.91
RPT6YGL048C ATP18P81450 59 aa3.11□□□□□ -1.91
RPT6YGL048C YOR072WQ08486 104 aa3.1□□□□□ -1.91
RPT6YGL048C YDL012CQ12489 107 aa3.1□□□□□ -1.91
RPT6YGL048C YLR157W-DP0CE99 70 aa3.09□□□□□ -1.91
RPT6YGL048C YJR107C-AP0CT86 78 aa3.09□□□□□ -1.91
RPT6YGL048C SDH6Q3E785 79 aa3.09□□□□□ -1.91
RPT6YGL048C COX7P10174 60 aa3.03□□□□□ -1.92
RPT6YGL048C RPL37BP51402 88 aaKnown RBP3.03□□□□□ -1.92
RPT6YGL048C YOL013W-AP0C272 63 aaPredicted RBP3.01□□□□□ -1.93
RPT6YGL048C YFR009W-AP0C5M9 85 aa3□□□□□ -1.93
RPT6YGL048C RPL38P49167 78 aaKnown RBP3□□□□□ -1.93
RPT6YGL048C YIL102CP40488 101 aa2.98□□□□□ -1.93
RPT6YGL048C YHR213W-BQ8TGK1 99 aa2.94□□□□□ -1.94
RPT6YGL048C YJL133C-AQ3E7A3 74 aa2.93□□□□□ -1.94
RPT6YGL048C YJR128WP47162 119 aa2.92□□□□□ -1.94
RPT6YGL048C YHR086W-AQ3E746 53 aa2.9□□□□□ -1.95
RPT6YGL048C YOR394C-AQ8TGJ0 55 aa2.9□□□□□ -1.95
RPT6YGL048C YAR064WP39563 99 aa2.85□□□□□ -1.95
RPT6YGL048C YHR073W-AP0C5N7 58 aa2.81□□□□□ -1.96
RPT6YGL048C OLI1P61829 76 aa2.77□□□□□ -1.97
RPT6YGL048C YBR072C-AQ3E794 53 aa2.76□□□□□ -1.97
RPT6YGL048C Q0017Q9ZZX8 53 aa2.76□□□□□ -1.97
RPT6YGL048C YOR316C-AQ3E806 69 aa2.74□□□□□ -1.97
RPT6YGL048C HHY1P39982 102 aa2.73□□□□□ -1.97
RPT6YGL048C YBR016WP38216 128 aa2.66□□□□□ -1.98
RPT6YGL048C YCR108CQ3E819 63 aa2.66□□□□□ -1.98
RPT6YGL048C YGR146C-AQ8TGT9 53 aa2.62□□□□□ -1.99
RPT6YGL048C YBL044WP38194 122 aa2.57□□□□□ -2
RPT6YGL048C YML054C-AQ3E809 52 aa2.48□□□□□ -2.01
RPT6YGL048C RPS29BP41058 56 aaKnown RBP2.43□□□□□ -2.02
RPT6YGL048C RPS29AP41057 56 aaKnown RBP2.42□□□□□ -2.02
RPT6YGL048C RPL37AP49166 88 aaKnown RBP2.36□□□□□ -2.03
RPT6YGL048C YOL164W-AQ3E7A5 60 aa2.33□□□□□ -2.04
RPT6YGL048C YLR157W-EP0CF00 54 aa2.31□□□□□ -2.04
RPT6YGL048C YOR072W-BQ3E832 53 aa2.29□□□□□ -2.04
RPT6YGL048C YHR050W-AQ05451 56 aa1.75□□□□□ -2.13
Retrieved 63 of 5,963 RNA–protein pairs in 38 ms