RNA–Protein interactions for RNA: YDR330W

UBX5, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeast

Gene UBX5, Length 1,503 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBX5	YDR330W	YOL013W-A	P0C272	63 aa	Predicted RBP	2.26	□□□□□ -2.05
UBX5	YDR330W	YGL149W	P53116	101 aa		2.26	□□□□□ -2.05
UBX5	YDR330W	FYV12	Q08559	129 aa		2.26	□□□□□ -2.05
UBX5	YDR330W	YIL102C	P40488	101 aa		2.25	□□□□□ -2.05
UBX5	YDR330W	LIP1	Q03579	150 aa		2.25	□□□□□ -2.05
UBX5	YDR330W	DDR48	P18899	430 aa	Known RBP	2.24	□□□□□ -2.05
UBX5	YDR330W	YPR153W	Q06537	140 aa		2.22	□□□□□ -2.05
UBX5	YDR330W	YHL005C	P38752	130 aa		2.22	□□□□□ -2.05
UBX5	YDR330W	KSH1	Q8TGJ3	72 aa		2.21	□□□□□ -2.06
UBX5	YDR330W	YHR073W-A	P0C5N7	58 aa		2.2	□□□□□ -2.06
UBX5	YDR330W	RPS30A	P0CX33	63 aa	Known RBP	2.2	□□□□□ -2.06
UBX5	YDR330W	RPS30B	P0CX34	63 aa	Known RBP	2.2	□□□□□ -2.06
UBX5	YDR330W	KTI11	Q3E840	82 aa		2.19	□□□□□ -2.06
UBX5	YDR330W	COX8	P04039	78 aa		2.17	□□□□□ -2.06
UBX5	YDR330W	YLR361C-A	Q3E795	98 aa		2.17	□□□□□ -2.06
UBX5	YDR330W	YOR381W-A	Q3E804	55 aa		2.17	□□□□□ -2.06
UBX5	YDR330W	YDR010C	Q12426	110 aa		2.17	□□□□□ -2.06
UBX5	YDR330W	MDN1	Q12019	4910 aa	Known RBP	2.16	□□□□□ -2.06
UBX5	YDR330W	YJR128W	P47162	119 aa		2.16	□□□□□ -2.06
UBX5	YDR330W	SDH6	Q3E785	79 aa		2.16	□□□□□ -2.06
UBX5	YDR330W	COX7	P10174	60 aa		2.15	□□□□□ -2.07
UBX5	YDR330W	YOR316C-A	Q3E806	69 aa		2.15	□□□□□ -2.07
UBX5	YDR330W	YGR164W	P53291	111 aa		2.14	□□□□□ -2.07
UBX5	YDR330W	YGR146C-A	Q8TGT9	53 aa		2.14	□□□□□ -2.07
UBX5	YDR330W	YLR255C	O13574	117 aa		2.13	□□□□□ -2.07
UBX5	YDR330W	YMR001C-A	Q8TGS9	76 aa		2.13	□□□□□ -2.07
UBX5	YDR330W	YKL065W-A	Q2V2P2	73 aa		2.12	□□□□□ -2.07
UBX5	YDR330W	HUB1	Q6Q546	73 aa		2.12	□□□□□ -2.07
UBX5	YDR330W	YMR122C	Q03879	124 aa		2.12	□□□□□ -2.07
UBX5	YDR330W	YNL122C	P53921	115 aa	Predicted RBP	2.11	□□□□□ -2.07
UBX5	YDR330W	OST5	Q92316	86 aa		2.11	□□□□□ -2.07
UBX5	YDR330W	YBR016W	P38216	128 aa		2.08	□□□□□ -2.08
UBX5	YDR330W	YER188C-A	P0C0V2	99 aa		2.07	□□□□□ -2.08
UBX5	YDR330W	YBR201C-A	Q2V2Q3	67 aa		2.07	□□□□□ -2.08
UBX5	YDR330W	OLI1	P61829	76 aa		2.06	□□□□□ -2.08
UBX5	YDR330W	CMC4	Q3E7A9	73 aa		2.05	□□□□□ -2.08
UBX5	YDR330W	MRX7	P53869	86 aa		2.04	□□□□□ -2.08
UBX5	YDR330W	YIL156W-B	Q2V2P4	73 aa		2.04	□□□□□ -2.08
UBX5	YDR330W	YCR095W-A	Q3E787	52 aa		2.04	□□□□□ -2.08
UBX5	YDR330W	RPL37B	P51402	88 aa	Known RBP	2.03	□□□□□ -2.08
UBX5	YDR330W	ATP17	Q06405	101 aa		2	□□□□□ -2.09
UBX5	YDR330W	YNL277W-A	Q3E7Z0	62 aa		1.99	□□□□□ -2.09
UBX5	YDR330W	YEL014C	P39999	101 aa		1.96	□□□□□ -2.1
UBX5	YDR330W	Q0017	Q9ZZX8	53 aa		1.95	□□□□□ -2.1
UBX5	YDR330W	YBL044W	P38194	122 aa		1.91	□□□□□ -2.1
UBX5	YDR330W	YJL009W	P47078	108 aa		1.91	□□□□□ -2.1
UBX5	YDR330W	SOM1	Q05676	74 aa		1.91	□□□□□ -2.1
UBX5	YDR330W	YOR394C-A	Q8TGJ0	55 aa		1.91	□□□□□ -2.1
UBX5	YDR330W	YOR376W-A	Q3E805	51 aa		1.89	□□□□□ -2.11
UBX5	YDR330W	YCR108C	Q3E819	63 aa		1.89	□□□□□ -2.11
UBX5	YDR330W	YML054C-A	Q3E809	52 aa		1.87	□□□□□ -2.11
UBX5	YDR330W	QCR10	P37299	77 aa		1.86	□□□□□ -2.11
UBX5	YDR330W	YDR210W	Q03482	75 aa		1.85	□□□□□ -2.11
UBX5	YDR330W	YGL014C-A	P0C5N1	53 aa		1.84	□□□□□ -2.11
UBX5	YDR330W	RPL37A	P49166	88 aa	Known RBP	1.84	□□□□□ -2.11
UBX5	YDR330W	YOR072W-B	Q3E832	53 aa		1.76	□□□□□ -2.13
UBX5	YDR330W	HHY1	P39982	102 aa		1.7	□□□□□ -2.14
UBX5	YDR330W	YBR072C-A	Q3E794	53 aa		1.67	□□□□□ -2.14
UBX5	YDR330W	RPS29B	P41058	56 aa	Known RBP	1.54	□□□□□ -2.16
UBX5	YDR330W	RPS29A	P41057	56 aa	Known RBP	1.45	□□□□□ -2.18
UBX5	YDR330W	YHR050W-A	Q05451	56 aa		1.42	□□□□□ -2.18
UBX5	YDR330W	YLR157W-E	P0CF00	54 aa		1.3	□□□□□ -2.2
UBX5	YDR330W	YOL164W-A	Q3E7A5	60 aa		1.3	□□□□□ -2.2

Retrieved 63 of 5,963 RNA–protein pairs in 28.7 ms