RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C YKL018C-AQ3E7A7 99 aa0.21□□□□□ -2.38
SHU2YDR078C YOR032W-AQ8TGS1 66 aa0.2□□□□□ -2.38
SHU2YDR078C MLP1Q02455 1875 aaKnown RBP0.2□□□□□ -2.38
SHU2YDR078C RPS27AP35997 82 aaKnown RBP0.17□□□□□ -2.38
SHU2YDR078C OLI1P61829 76 aa0.17□□□□□ -2.38
SHU2YDR078C LSM2P38203 95 aaKnown RBP0.16□□□□□ -2.38
SHU2YDR078C PAU7P39545 55 aa0.16□□□□□ -2.38
SHU2YDR078C RPS27BP38711 82 aa0.15□□□□□ -2.39
SHU2YDR078C YHR213W-AQ8TGT4 77 aa0.15□□□□□ -2.39
SHU2YDR078C YBR200W-AQ3E755 54 aa0.14□□□□□ -2.39
SHU2YDR078C YFR010W-AP0C5N0 62 aa0.12□□□□□ -2.39
SHU2YDR078C YOR394C-AQ8TGJ0 55 aa0.11□□□□□ -2.39
SHU2YDR078C RPS29AP41057 56 aaKnown RBP0.1□□□□□ -2.39
SHU2YDR078C RPL39P04650 51 aa0.09□□□□□ -2.4
SHU2YDR078C YBL039W-BP0C268 59 aa0.09□□□□□ -2.4
SHU2YDR078C YOR011W-AQ3E807 68 aa0.09□□□□□ -2.4
SHU2YDR078C SSS1P35179 80 aa0.08□□□□□ -2.4
SHU2YDR078C SIP18P50263 79 aa0.08□□□□□ -2.4
SHU2YDR078C YDR182W-AQ3E796 67 aa0.07□□□□□ -2.4
SHU2YDR078C YMR001C-AQ8TGS9 76 aa0.07□□□□□ -2.4
SHU2YDR078C HOR7Q05827 59 aa0.06□□□□□ -2.4
SHU2YDR078C ERI1P62651 68 aaKnown RBP0.05□□□□□ -2.4
SHU2YDR078C NCE101Q02820 53 aa0.05□□□□□ -2.4
SHU2YDR078C YMR105W-AQ8TGS8 64 aa0.05□□□□□ -2.4
SHU2YDR078C SPI1P40092 148 aa0.04□□□□□ -2.4
SHU2YDR078C YOR008C-AQ3E7B9 74 aa0.04□□□□□ -2.4
SHU2YDR078C YLL066W-BQ8TGJ7 56 aa0.03□□□□□ -2.4
SHU2YDR078C YDR034C-AP0C289 58 aa0.02□□□□□ -2.41
SHU2YDR078C HUB1Q6Q546 73 aa0.02□□□□□ -2.41
SHU2YDR078C TOM7P53507 60 aa0.01□□□□□ -2.41
SHU2YDR078C YFL041W-AQ3E817 63 aa0□□□□□ -2.41
SHU2YDR078C PAI3P01094 68 aa-0.01□□□□□ -2.41
SHU2YDR078C YOR192C-CQ3E736 78 aa-0.03□□□□□ -2.41
SHU2YDR078C YOL131WQ08270 108 aa-0.05□□□□□ -2.42
SHU2YDR078C TOS6P48560 102 aa-0.06□□□□□ -2.42
SHU2YDR078C Q0017Q9ZZX8 53 aa-0.06□□□□□ -2.42
SHU2YDR078C YPR010C-AA5Z2X5 72 aa-0.08□□□□□ -2.42
SHU2YDR078C YHR073W-AP0C5N7 58 aa-0.1□□□□□ -2.43
SHU2YDR078C YGL258W-AQ3E740 77 aa-0.11□□□□□ -2.43
SHU2YDR078C RPS30AP0CX33 63 aaKnown RBP-0.12□□□□□ -2.43
SHU2YDR078C RPS30BP0CX34 63 aaKnown RBP-0.12□□□□□ -2.43
SHU2YDR078C SMX2P40204 77 aaKnown RBP-0.12□□□□□ -2.43
SHU2YDR078C PMP3P87284 55 aa-0.12□□□□□ -2.43
SHU2YDR078C COX9P07255 59 aa-0.13□□□□□ -2.43
SHU2YDR078C DDR2P89113 61 aa-0.13□□□□□ -2.43
SHU2YDR078C YKL023C-AQ2V2P3 75 aa-0.13□□□□□ -2.43
SHU2YDR078C YSY6P38374 65 aa-0.14□□□□□ -2.43
SHU2YDR078C YLR342W-AQ3E810 57 aa-0.14□□□□□ -2.43
SHU2YDR078C COA2Q3E823 68 aa-0.14□□□□□ -2.43
SHU2YDR078C YML054C-AQ3E809 52 aa-0.15□□□□□ -2.43
SHU2YDR078C YBR230W-AQ3E762 66 aa-0.16□□□□□ -2.44
SHU2YDR078C YOR316C-AQ3E806 69 aa-0.16□□□□□ -2.44
SHU2YDR078C YJL127C-BQ3E828 52 aa-0.16□□□□□ -2.44
SHU2YDR078C YLR157W-DP0CE99 70 aa-0.17□□□□□ -2.44
SHU2YDR078C YHR050W-AQ05451 56 aa-0.17□□□□□ -2.44
SHU2YDR078C YLL006W-AQ3E814 58 aa-0.17□□□□□ -2.44
SHU2YDR078C RPL29P05747 59 aaPredicted RBP-0.18□□□□□ -2.44
SHU2YDR078C YJL133C-AQ3E7A3 74 aa-0.18□□□□□ -2.44
SHU2YDR078C YOR072W-BQ3E832 53 aa-0.21□□□□□ -2.44
SHU2YDR078C YIL102C-AQ2V2P5 75 aa-0.23□□□□□ -2.45
SHU2YDR078C YGR146C-AQ8TGT9 53 aa-0.24□□□□□ -2.45
SHU2YDR078C YOL166W-AQ8TGJ1 51 aa-0.3□□□□□ -2.46
SHU2YDR078C VMA9Q3E7B6 73 aa-0.31□□□□□ -2.46
Retrieved 63 of 5,963 RNA–protein pairs in 38.9 ms