RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C MRP10O75012 95 aa4.02□□□□□ -1.77
RGD1YBR260C YJR128WP47162 119 aa4□□□□□ -1.77
RGD1YBR260C PRP8P33334 2413 aaKnown RBP4□□□□□ -1.77
RGD1YBR260C RTC6O14464 93 aa3.99□□□□□ -1.77
RGD1YBR260C YLL066W-BQ8TGJ7 56 aa3.99□□□□□ -1.77
RGD1YBR260C YBR201C-AQ2V2Q3 67 aa3.96□□□□□ -1.78
RGD1YBR260C UTP20P35194 2493 aaKnown RBP3.94□□□□□ -1.78
RGD1YBR260C YBL008W-AQ3E821 79 aa3.92□□□□□ -1.78
RGD1YBR260C Q0297Q9ZZV8 51 aa3.92□□□□□ -1.78
RGD1YBR260C RPL43AP0CX25 92 aaKnown RBP3.92□□□□□ -1.78
RGD1YBR260C RPL43BP0CX26 92 aa3.92□□□□□ -1.78
RGD1YBR260C YLR255CO13574 117 aa3.91□□□□□ -1.78
RGD1YBR260C YGL041C-BQ3E750 60 aa3.91□□□□□ -1.78
RGD1YBR260C YGR146C-AQ8TGT9 53 aa3.91□□□□□ -1.78
RGD1YBR260C YBR056W-AI2HB52 66 aa3.9□□□□□ -1.79
RGD1YBR260C YCL042WP25572 119 aa3.9□□□□□ -1.79
RGD1YBR260C YOL097W-AQ3E7Y9 61 aa3.87□□□□□ -1.79
RGD1YBR260C YEL014CP39999 101 aa3.87□□□□□ -1.79
RGD1YBR260C YDR210WQ03482 75 aa3.85□□□□□ -1.79
RGD1YBR260C COX8P04039 78 aa3.85□□□□□ -1.79
RGD1YBR260C YOR316C-AQ3E806 69 aa3.82□□□□□ -1.8
RGD1YBR260C RPL37BP51402 88 aaKnown RBP3.8□□□□□ -1.8
RGD1YBR260C YPR195CQ06594 109 aa3.8□□□□□ -1.8
RGD1YBR260C MEC1P38111 2368 aa3.78□□□□□ -1.8
RGD1YBR260C YHR073W-AP0C5N7 58 aa3.78□□□□□ -1.8
RGD1YBR260C YCR108CQ3E819 63 aa3.78□□□□□ -1.8
RGD1YBR260C OLI1P61829 76 aa3.77□□□□□ -1.81
RGD1YBR260C YJL144WP47009 104 aa3.77□□□□□ -1.81
RGD1YBR260C CMC4Q3E7A9 73 aa3.77□□□□□ -1.81
RGD1YBR260C TEL1P38110 2787 aa3.76□□□□□ -1.81
RGD1YBR260C YER078W-AQ3E7A2 54 aa3.76□□□□□ -1.81
RGD1YBR260C YOR394C-AQ8TGJ0 55 aa3.76□□□□□ -1.81
RGD1YBR260C YBL044WP38194 122 aa3.74□□□□□ -1.81
RGD1YBR260C YBR016WP38216 128 aa3.73□□□□□ -1.81
RGD1YBR260C TOR2P32600 2474 aaKnown RBP3.72□□□□□ -1.81
RGD1YBR260C YJR085CP47131 105 aaKnown RBP3.72□□□□□ -1.81
RGD1YBR260C YDR034C-AP0C289 58 aa3.7□□□□□ -1.82
RGD1YBR260C YLR122CQ12312 125 aa3.66□□□□□ -1.82
RGD1YBR260C NUM1Q00402 2748 aa3.63□□□□□ -1.83
RGD1YBR260C COX7P10174 60 aa3.55□□□□□ -1.84
RGD1YBR260C YER175W-AQ8TGU4 54 aa3.53□□□□□ -1.84
RGD1YBR260C YHR032W-AP0C5N6 59 aa3.47□□□□□ -1.85
RGD1YBR260C YFL067WP43537 175 aa3.46□□□□□ -1.86
RGD1YBR260C LCL1Q02786 101 aa3.46□□□□□ -1.86
RGD1YBR260C RPL37AP49166 88 aaKnown RBP3.42□□□□□ -1.86
RGD1YBR260C HHY1P39982 102 aa3.38□□□□□ -1.87
RGD1YBR260C TOR1P35169 2470 aa3.35□□□□□ -1.87
RGD1YBR260C YBR072C-AQ3E794 53 aa3.33□□□□□ -1.88
RGD1YBR260C YJL009WP47078 108 aa3.32□□□□□ -1.88
RGD1YBR260C DYN1P36022 4092 aa3.3□□□□□ -1.88
RGD1YBR260C YOR072W-BQ3E832 53 aa3.3□□□□□ -1.88
RGD1YBR260C YAL067W-AQ8TGK6 75 aa3.2□□□□□ -1.9
RGD1YBR260C YML054C-AQ3E809 52 aa3.06□□□□□ -1.92
RGD1YBR260C YOL164W-AQ3E7A5 60 aa2.97□□□□□ -1.93
RGD1YBR260C Q0017Q9ZZX8 53 aa2.96□□□□□ -1.94
RGD1YBR260C CUP1-1P0CX80 61 aa2.86□□□□□ -1.95
RGD1YBR260C CUP1-2P0CX81 61 aa2.86□□□□□ -1.95
RGD1YBR260C MDN1Q12019 4910 aaKnown RBP2.66□□□□□ -1.98
RGD1YBR260C YHR050W-AQ05451 56 aa2.57□□□□□ -2
RGD1YBR260C YHR086W-AQ3E746 53 aa2.56□□□□□ -2
RGD1YBR260C YLR157W-EP0CF00 54 aa2.45□□□□□ -2.02
RGD1YBR260C RPS29AP41057 56 aaKnown RBP2.32□□□□□ -2.04
RGD1YBR260C RPS29BP41058 56 aaKnown RBP2.01□□□□□ -2.09
Retrieved 63 of 5,963 RNA–protein pairs in 63.7 ms