RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 TERB1Q8NA31 727 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 FAM184AQ8NB25 1140 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 BAHD1Q8TBE0 780 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-215ENST00000592911 LRRC15Q8TF66 581 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 CALML4Q96GE6 196 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 ZSCAN31Q96LW9 406 aaPredicted RBP9.28□□□□□ -0.92
SMAD4-215ENST00000592911 PNMA5Q96PV4 448 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 FIZ1Q96SL8 496 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 COMMD8Q9NX08 183 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 DEC1Q9P2X7 70 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 GTF3C4Q9UKN8 822 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 PCOLCE2Q9UKZ9 415 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 LIMCH1Q9UPQ0 1083 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 R3HCC1Q9Y3T6 440 aaKnown RBP9.28□□□□□ -0.92
SMAD4-215ENST00000592911 PCDHB6Q9Y5E3 794 aa9.28□□□□□ -0.92
SMAD4-215ENST00000592911 KALRNO60229 2985 aa9.27□□□□□ -0.92
SMAD4-215ENST00000592911 COL5A1P20908 1838 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-215ENST00000592911 TBC1D3BA6NDS4 549 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 GOLGA8CPA6NN73 597 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 PP2D1A8MPX8 630 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 SH3BP5O60239 455 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 NDUFS2O75306 463 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 RTN3O95197 1032 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-215ENST00000592911 HOXB2P14652 356 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 OXTRP30559 389 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 GPR15P49685 360 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 ACOT2P49753 483 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 FAM193AP78312 1265 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 GUCY1B3Q02153 619 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 RAD51AP2Q09MP3 1159 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 SUZ12Q15022 739 aaKnown RBP9.27□□□□□ -0.93
SMAD4-215ENST00000592911 IL17AQ16552 155 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 PLEKHG6Q3KR16 790 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 CRELD2Q6UXH1 353 aaPredicted RBP9.27□□□□□ -0.93
SMAD4-215ENST00000592911 ARMCX6Q7L4S7 300 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 TTC30AQ86WT1 665 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 SKAP1Q86WV1 359 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 C1orf127Q8N9H9 656 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 TRIML1Q8N9V2 468 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 CXorf38Q8TB03 319 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 POMGNT1Q8WZA1 660 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 HSPA12BQ96MM6 686 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 ELOVL4Q9GZR5 314 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 CD248Q9HCU0 757 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 CALCOCO1Q9P1Z2 691 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 CPQQ9Y646 472 aa9.27□□□□□ -0.93
SMAD4-215ENST00000592911 A0A1W2PQF6 199 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 ATXN7O15265 892 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-215ENST00000592911 IGLV3-19P01714 112 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 ITGB3P05106 788 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 WARSP23381 471 aaKnown RBP9.26□□□□□ -0.93
SMAD4-215ENST00000592911 POLR2BP30876 1174 aaKnown RBP9.26□□□□□ -0.93
SMAD4-215ENST00000592911 GRIK1P39086 918 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 UBA7P41226 1012 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 NEK4P51957 841 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 ZXDBP98169 803 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 GRIK2Q13002 908 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 INAVAQ3KP66 663 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 ZC2HC1CQ53FD0 456 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-215ENST00000592911 SWT1Q5T5J6 900 aaKnown RBP9.26□□□□□ -0.93
SMAD4-215ENST00000592911 SDHAF4Q5VUM1 108 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 TDRD10Q5VZ19 366 aaKnown RBP9.26□□□□□ -0.93
SMAD4-215ENST00000592911 C19orf48Q6RUI8 117 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 ZNF720Q7Z2F6 126 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 GPBP1Q86WP2 473 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 SLC41A1Q8IVJ1 513 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 SCN4BQ8IWT1 228 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 MYCBPAPQ8TBZ2 947 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 ADAM32Q8TC27 787 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 IPO4Q8TEX9 1081 aaKnown RBP9.26□□□□□ -0.93
SMAD4-215ENST00000592911 XPO6Q96QU8 1125 aaKnown RBP9.26□□□□□ -0.93
SMAD4-215ENST00000592911 SYT15Q9BQS2 421 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 OSGEPQ9NPF4 335 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.26□□□□□ -0.935e-9■■■■■ 51.3
SMAD4-215ENST00000592911 MARK1Q9P0L2 795 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 WDR35Q9P2L0 1181 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 AGAP1Q9UPQ3 857 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 SNX9Q9Y5X1 595 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 ATXN2Q99700 1313 aaKnown RBP9.26□□□□□ -0.93
SMAD4-215ENST00000592911 ZNF462Q96JM2 2506 aa9.26□□□□□ -0.93
SMAD4-215ENST00000592911 PAPSS1O43252 624 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-215ENST00000592911 CACNG3O60359 315 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 DFNA5O60443 496 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 TULP3O75386 442 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 TACC1O75410 805 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 KRT18P05783 430 aaKnown RBP9.25□□□□□ -0.93
SMAD4-215ENST00000592911 MBL2P11226 248 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-215ENST00000592911 GAP43P17677 238 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 CD6P30203 668 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 ADSSP30520 456 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 MATKP42679 507 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 ABCG1P45844 678 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 SLC6A11P48066 632 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 TFAMQ00059 246 aaKnown RBP9.25□□□□□ -0.93
SMAD4-215ENST00000592911 ST3GAL1Q11201 340 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 STARD3Q14849 445 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 SMAD1Q15797 465 aaKnown RBP9.25□□□□□ -0.93
SMAD4-215ENST00000592911 SOWAHAQ2M3V2 549 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 LY6G5CQ5SRR4 150 aa9.25□□□□□ -0.93
SMAD4-215ENST00000592911 RGL4Q8IZJ4 473 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms