RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SLC9A7Q96T83 725 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 ACBD6Q9BR61 282 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 FTHL17Q9BXU8 183 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 EPB41L4BQ9H329 900 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 DPEP3Q9H4B8 488 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 CNGB3Q9NQW8 809 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 KLHL11Q9NVR0 708 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 DDX43Q9NXZ2 648 aaKnown RBP10.85□□□□□ -0.67
VPS25-203ENST00000589520 NME7Q9Y5B8 376 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 A0A0C4DFX4 3053 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 MGAMO43451 1857 aa10.85□□□□□ -0.67
VPS25-203ENST00000589520 GRIN2DO15399 1336 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 C9IYK1 514 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 APOL1O14791 398 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 TP73O15350 636 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 RGS16O15492 202 aaPredicted RBP10.84□□□□□ -0.67
VPS25-203ENST00000589520 DAB1O75553 588 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 CTSHP09668 335 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 CCDC130P13994 396 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 CD52P31358 61 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 EIF3EP60228 445 aaKnown RBP10.84□□□□□ -0.67
VPS25-203ENST00000589520 YWHAZP63104 245 aaKnown RBP10.84□□□□□ -0.67
VPS25-203ENST00000589520 PPP2R2AP63151 447 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 TRIM32Q13049 653 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 DPYSL3Q14195 570 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 LPIN1Q14693 890 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 NOMO1Q15155 1222 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 TRIM71Q2Q1W2 868 aaKnown RBP10.84□□□□□ -0.67
VPS25-203ENST00000589520 SMTNL2Q2TAL5 461 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 P3H1Q32P28 736 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 SLC25A52Q3SY17 297 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 KCTD16Q68DU8 428 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 SLC9A4Q6AI14 798 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 SCYL2Q6P3W7 929 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 CENPUQ71F23 418 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 PPIL6Q8IXY8 311 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 FUKQ8N0W3 1084 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 CNPY4Q8N129 248 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 SLC43A3Q8NBI5 491 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 IRGQQ8WZA9 623 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 CENPTQ96BT3 561 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 ZFP42Q96MM3 310 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 FERMT1Q9BQL6 677 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 SYT15Q9BQS2 421 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 MED10Q9BTT4 135 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 CALN1Q9BXU9 219 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 CDC42EP4Q9H3Q1 356 aaKnown RBP10.84□□□□□ -0.67
VPS25-203ENST00000589520 AGO3Q9H9G7 860 aaKnown RBP10.84□□□□□ -0.67
VPS25-203ENST00000589520 NGRNQ9NPE2 291 aaKnown RBP10.84□□□□□ -0.67
VPS25-203ENST00000589520 AAASQ9NRG9 546 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 RGS18Q9NS28 235 aa10.84□□□□□ -0.67
VPS25-203ENST00000589520 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.84□□□□□ -0.67
VPS25-203ENST00000589520 BCLAF3A2AJT9 711 aaKnown RBP10.83□□□□□ -0.68
VPS25-203ENST00000589520 E7EVH7 732 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 M0QZQ0 153 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 TULP2O00295 520 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 ALOX15BO15296 676 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 F9P00740 461 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 RBP3P10745 1247 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 GHRP10912 638 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 LCP1P13796 627 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 MDH1P40925 334 aaKnown RBP10.83□□□□□ -0.68
VPS25-203ENST00000589520 MAGEA4P43358 317 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 SCNN1GP51170 649 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 IRAK1P51617 712 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 CLCNKBP51801 687 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 HDAC4P56524 1084 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 BCAR1P56945 870 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 FAM189BP81408 668 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 ATP11AP98196 1134 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 ROR1Q01973 937 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 GPS1Q13098 491 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 NR1H3Q13133 447 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 TRIP13Q15645 432 aaPredicted RBP10.83□□□□□ -0.68
VPS25-203ENST00000589520 C15orf59Q2T9L4 293 aaPredicted RBP10.83□□□□□ -0.68
VPS25-203ENST00000589520 ANKRD20A8PQ5CZ79 823 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 TNFAIP8L3Q5GJ75 292 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 ZNF618Q5T7W0 954 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 CYP4V2Q6ZWL3 525 aaPredicted RBP10.83□□□□□ -0.68
VPS25-203ENST00000589520 BEND5Q7L4P6 421 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 CCDC25Q86WR0 208 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 ECHDC2Q86YB7 292 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 SIX6OS1Q8N1H7 587 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 WNT8BQ93098 351 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 NT5C3BQ969T7 300 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 SMARCD1Q96GM5 515 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 PEBP4Q96S96 227 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 ADAM2Q99965 735 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 CENPHQ9H3R5 247 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 GOLGA2P5Q9HBQ8 144 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 POPDC2Q9HBU9 364 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 PCDH18Q9HCL0 1135 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 HMX1Q9NP08 348 aaPredicted RBP10.83□□□□□ -0.68
VPS25-203ENST00000589520 PNPLA8Q9NP80 782 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 MIOSQ9NXC5 875 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 PAK5Q9P286 719 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 BCCIPQ9P287 314 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS25-203ENST00000589520 FETUBQ9UGM5 382 aa10.83□□□□□ -0.68
VPS25-203ENST00000589520 NOVA2Q9UNW9 492 aaKnown RBP10.83□□□□□ -0.68
VPS25-203ENST00000589520 RAD54BQ9Y620 910 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms