RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 SCML4Q8N228 414 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 CELF5Q8N6W0 485 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 SLC20A1Q8WUM9 679 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 E2F7Q96AV8 911 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 NUP58Q9BVL2 599 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 CYLDQ9NQC7 956 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 CNGB3Q9NQW8 809 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 OBP2AQ9NY56 170 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 NAGPAQ9UK23 515 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 MYO6Q9UM54 1294 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 TRIOO75962 3097 aa12.56□□□□□ -0.4
RABGGTA-218ENST00000560777 LRRC53A6NM62 1247 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 YJEFN3A6XGL0 299 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 E7ENQ6 273 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 DLL1O00548 723 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 DPYSL4O14531 572 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 CBFA2T2O43439 604 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 TLR5O60602 858 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 CKMP06732 381 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 RARGP13631 454 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 ALADP13716 330 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 PSMC3P17980 439 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 CDH5P33151 784 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 ACADSBP45954 432 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 PSEN1P49768 467 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 DAOAP59103 153 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 YWHAGP61981 247 aaKnown RBP eCLIP12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 CDR2Q01850 454 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 PDCLQ13371 301 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 GRM2Q14416 872 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 ZNF677Q86XU0 584 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 UBALD2Q8IYN6 164 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 SIX6OS1Q8N1H7 587 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 ZNF276Q8N554 614 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 C1orf131Q8NDD1 294 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 RIN3Q8TB24 985 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 CLEC4CQ8WTT0 213 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 EDAQ92838 391 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 PPP1R13BQ96KQ4 1090 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 CPXM1Q96SM3 734 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 ANP32EQ9BTT0 268 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 TRMT61BQ9BVS5 477 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 MIS12Q9H081 205 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 PDCL3Q9H2J4 239 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 EPHX3Q9H6B9 360 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 ST7Q9NRC1 585 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 CLIC5Q9NZA1 410 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 AIPL1Q9NZN9 384 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 TJP2Q9UDY2 1190 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 NUDT5Q9UKK9 219 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 ARHGAP26Q9UNA1 814 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 DUSP12Q9UNI6 340 aa12.55□□□□□ -0.4
RABGGTA-218ENST00000560777 A0A1W2PQJ5 194 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 E5RJQ4 531 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 PAPSS1O43252 624 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 FBXO21O94952 628 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 TPM3P06753 285 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 MBL2P11226 248 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 SRFP11831 508 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 FERP16591 822 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 ATP5C1P36542 298 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 FMO1Q01740 532 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 FCHO2Q0JRZ9 810 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 BSPRYQ5W0U4 402 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 KLHDC10Q6PID8 442 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 SARM1Q6SZW1 724 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 HFE2Q6ZVN8 426 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 ARHGAP18Q8N392 663 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 TMEM35BQ8NCS4 154 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 BPIFB1Q8TDL5 484 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 SH3RF2Q8TEC5 729 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 DEPDC1BQ8WUY9 529 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 CPLX3Q8WVH0 158 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 IRGQQ8WZA9 623 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 PCDHB18PQ96TA0 734 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 SLC2A4RGQ9NR83 387 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 GKN1Q9NS71 199 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 CPQQ9Y646 472 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 ITIH6Q6UXX5 1313 aa12.54□□□□□ -0.4
RABGGTA-218ENST00000560777 NUP210Q8TEM1 1887 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 LEFTY2O00292 366 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 LSM8O95777 96 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 CYP1A1P04798 512 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 GYPCP04921 128 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 CCDC172P0C7W6 258 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 RALAP11233 206 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 TCF3P15923 654 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 GDI1P31150 447 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 ZNF77Q15935 545 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 PTPN20Q4JDL3 420 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 C10orf120Q5SQS8 335 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 SFMBT2Q5VUG0 894 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 BTBD8Q5XKL5 378 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 E4F1Q66K89 784 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 VSTM4Q8IW00 320 aa12.53□□□□□ -0.4
RABGGTA-218ENST00000560777 CPA5Q8WXQ8 436 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms