RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 TARSL2A2RTX5 802 aaKnown RBP17.96■□□□□ 0.47
PTPN21-208ENST00000556564 PTK6Q13882 451 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 OTOP2Q7RTS6 562 aa17.96■□□□□ 0.47
PTPN21-208ENST00000556564 GTPBP10A4D1E9 387 aaKnown RBP17.96■□□□□ 0.46
PTPN21-208ENST00000556564 PYGLP06737 847 aa17.96■□□□□ 0.46
PTPN21-208ENST00000556564 VSNL1P62760 191 aa17.96■□□□□ 0.46
PTPN21-208ENST00000556564 CDKAL1Q5VV42 579 aa17.96■□□□□ 0.46
PTPN21-208ENST00000556564 NFKBIZQ9BYH8 718 aa17.96■□□□□ 0.46
PTPN21-208ENST00000556564 GJB6O95452 261 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 YWHAZP63104 245 aaKnown RBP17.95■□□□□ 0.46
PTPN21-208ENST00000556564 STARD3Q14849 445 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 CCDC149Q6ZUS6 474 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 ULBP1Q9BZM6 244 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 NSMCE4AQ9NXX6 385 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 ZFP69BQ9UJL9 534 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 DCTN3O75935 186 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 JCHAINP01591 159 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 EFTUD2Q15029 972 aaKnown RBP eCLIP17.95■□□□□ 0.46
PTPN21-208ENST00000556564 ABHD15Q6UXT9 468 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 C4orf22Q6V702 233 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 C11orf96Q7Z7L8 435 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 C4orf33Q8N1A6 199 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 SERPINB11Q96P15 392 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 TRIM15Q9C019 465 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 Q9H521 79 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 VCX3AQ9NNX9 186 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 SLC39A10Q9ULF5 831 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 HEATR9A2RTY3 570 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 CA12O43570 354 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 GTF2BQ00403 316 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 MORF4L2Q15014 288 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 USP41Q3LFD5 358 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 STAMBPL1Q96FJ0 436 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 NXF3Q9H4D5 531 aaKnown RBP17.95■□□□□ 0.46
PTPN21-208ENST00000556564 CERS4Q9HA82 394 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 FAM105AQ9NUU6 356 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 SRP72O76094 671 aaKnown RBP17.95■□□□□ 0.46
PTPN21-208ENST00000556564 GZMAP12544 262 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 SELPP16109 830 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 SPRP35270 261 aaPredicted RBP17.95■□□□□ 0.46
PTPN21-208ENST00000556564 ANKRD20A4Q4UJ75 823 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 ANKRD20A8PQ5CZ79 823 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 ANKRD20A2Q5SQ80 823 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 ANKRD20A1Q5TYW2 823 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 FAM136AQ96C01 138 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 EFHD1Q9BUP0 239 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 PROSCO94903 275 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 TGM2P21980 687 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 PTENP60484 403 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 CCL14Q16627 93 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 RFWD2Q8NHY2 731 aa17.95■□□□□ 0.46
PTPN21-208ENST00000556564 PSMC3IPQ9P2W1 217 aaPredicted RBP17.95■□□□□ 0.46
PTPN21-208ENST00000556564 E5RJQ4 531 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 SPATA31C1P0DKV0 1188 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 SGO1Q5FBB7 561 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 SDHAF4Q5VUM1 108 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 SRPK1Q96SB4 655 aaKnown RBP17.94■□□□□ 0.46
PTPN21-208ENST00000556564 SMIM35A0A1B0GVV1 85 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 FOXP2O15409 715 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 PAEPP09466 180 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 NDUFV1P49821 464 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 SLC35C1Q96A29 364 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 KLF6Q99612 283 aaPredicted RBP17.94■□□□□ 0.46
PTPN21-208ENST00000556564 ATP13A1Q9HD20 1204 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 SOWAHBA6NEL2 793 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 CXCL14O95715 111 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 MZF1P28698 734 aaPredicted RBP17.94■□□□□ 0.46
PTPN21-208ENST00000556564 ONECUT3O60422 494 aaPredicted RBP17.94■□□□□ 0.46
PTPN21-208ENST00000556564 SARSP49591 514 aaKnown RBP17.94■□□□□ 0.46
PTPN21-208ENST00000556564 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
PTPN21-208ENST00000556564 NFIL3Q16649 462 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 PPP4R4Q6NUP7 873 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 GPR152Q8TDT2 470 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 UBE2Q2Q8WVN8 375 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 TMEM121Q9BTD3 319 aa17.94■□□□□ 0.46
PTPN21-208ENST00000556564 SERPINB9P50453 376 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 PPP3CAQ08209 521 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 ZNF284Q2VY69 593 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 SPDYE7PQ495Y7 208 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 TTC39BQ5VTQ0 682 aaPredicted RBP17.93■□□□□ 0.46
PTPN21-208ENST00000556564 MYLPFQ96A32 169 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 ATP6V1G3Q96LB4 118 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 DUSP11O75319 330 aaKnown RBP17.93■□□□□ 0.46
PTPN21-208ENST00000556564 MYL2P10916 166 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 TRMT10CQ7L0Y3 403 aaKnown RBP17.93■□□□□ 0.46
PTPN21-208ENST00000556564 LPCAT1Q8NF37 534 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 SLC26A7Q8TE54 656 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 ZBTB10Q96DT7 871 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 COL20A1Q9P218 1284 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 ASTN1O14525 1302 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 RAMP2O60895 175 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 MDM2Q00987 491 aaPredicted RBP17.93■□□□□ 0.46
PTPN21-208ENST00000556564 GCNT1Q02742 428 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 MROH9Q5TGP6 573 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTPN21-208ENST00000556564 LRRC43Q8N309 656 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 OR2W6PQ8NHA6 318 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 BRI3BPQ8WY22 251 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 ZCWPW1Q9H0M4 648 aa17.93■□□□□ 0.46
PTPN21-208ENST00000556564 FAM96AQ9H5X1 160 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms