RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 BHLHA9Q7RTU4 235 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 HSPH1Q92598 858 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 NT5C3BQ969T7 300 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 RUNDC3BQ96NL0 473 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 SLC2A13Q96QE2 648 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 PNPLA8Q9NP80 782 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 CALCOCO1Q9P1Z2 691 aa20.45■□□□□ 0.86
RBFOX1-215ENST00000553186 SF3B1O75533 1304 aaKnown RBP eCLIP20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 SASH3O75995 380 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 FYNP06241 537 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 CSF2RAP15509 400 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 CCNG2Q16589 344 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 SLC39A12Q504Y0 691 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 BOLA3Q53S33 107 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 FUT10Q6P4F1 479 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 C4orf50Q6ZRC1 276 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 SPATA2LQ8IUW3 424 aaPredicted RBP20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 CCDC105Q8IYK2 499 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 KCTD6Q8NC69 237 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 BCL7CQ8WUZ0 217 aaPredicted RBP20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 IFT81Q8WYA0 676 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 SLCO2A1Q92959 643 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 B3GALT6Q96L58 329 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 NCAPGQ9BPX3 1015 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 NFU1Q9UMS0 254 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 ABHD14A-ACY1A0A1B0GW23 586 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 YJEFN3A6XGL0 299 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 E7ENQ6 273 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 USP17L7P0C7H9 530 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 ECHS1P30084 290 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 ATXN1P54253 815 aaKnown RBP20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 SLC25A52Q3SY17 297 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 DUPD1Q68J44 220 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 BNIPLQ7Z465 357 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 CEP57Q86XR8 500 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 EIF1ADQ8N9N8 165 aaKnown RBP20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 TEKT4Q8WW24 435 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 TOP1MTQ969P6 601 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 TBCBQ99426 244 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 ERP44Q9BS26 406 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 TMEM106CQ9BVX2 250 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 HOMER3Q9NSC5 361 aa20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 UTP11Q9Y3A2 253 aaKnown RBP20.44■□□□□ 0.86
RBFOX1-215ENST00000553186 FNDC1Q4ZHG4 1894 aaPredicted RBP20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 ZBED1O96006 694 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 DESP17661 470 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 CYP2F1P24903 491 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 NOS2P35228 1153 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 SNX1Q13596 522 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 DCAF6Q58WW2 860 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 OTUD1Q5VV17 481 aaPredicted RBP20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 PM20D1Q6GTS8 502 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 SCYL2Q6P3W7 929 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 STRADAQ7RTN6 431 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 DDX42Q86XP3 938 aaKnown RBP eCLIP20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 DCP1BQ8IZD4 617 aaKnown RBP20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 POPDC2Q9HBU9 364 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 PRDM5Q9NQX1 630 aaPredicted RBP20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 USP3Q9Y6I4 520 aa20.43■□□□□ 0.86
RBFOX1-215ENST00000553186 DAPK3O43293 454 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 ATP8B1O43520 1251 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 EFEMP2O95967 443 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 PITX1P78337 314 aaPredicted RBP20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 CUL1Q13616 776 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 CTXN3Q4LDR2 81 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 SYPL2Q5VXT5 272 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 NPY6RQ99463 290 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 FAM118BQ9BPY3 351 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 RAB17Q9H0T7 212 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 CWH43Q9H720 699 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 PCDH10Q9P2E7 1040 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 COL4A6Q14031 1691 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 VWA8A3KMH1 1905 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 MAP2K7O14733 419 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 MDM4O15151 490 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 CAPN2P17655 700 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 EPHB4P54760 987 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 ELAVL2Q12926 359 aaKnown RBP20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 SCML4Q8N228 414 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 SNRNP25Q9BV90 132 aaKnown RBP20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 NLRC5Q86WI3 1866 aa20.42■□□□□ 0.86
RBFOX1-215ENST00000553186 TBC1D4O60343 1298 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 NFE2Q16621 373 aaPredicted RBP20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 RTP2Q5QGT7 225 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 ZNF280DQ6N043 979 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 MFSD5Q6N075 450 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 TAS1R1Q7RTX1 841 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 FUBP3Q96I24 572 aaKnown RBP eCLIP20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 GDAP1L1Q96MZ0 367 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 NAALADL1Q9UQQ1 740 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 OR6C75A6NL08 312 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 TNFRSF10BO14763 440 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 ECEL1O95672 775 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 RAG1P15918 1043 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 IL4RP24394 825 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 DRG2P55039 364 aaKnown RBP20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 CDH6P55285 790 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 DEFB103AP81534 67 aa20.41■□□□□ 0.86
RBFOX1-215ENST00000553186 DPYSL3Q14195 570 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms