RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 USP18Q9UMW8 372 aa14.32□□□□□ -0.12
CALCOCO1-214ENST00000549613 USP3Q9Y6I4 520 aa14.32□□□□□ -0.12
CALCOCO1-214ENST00000549613 TARSL2A2RTX5 802 aaKnown RBP14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 LTFP02788 710 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 USP17L7P0C7H9 530 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 PTPN7P35236 360 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 ATP11AP98196 1134 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 SLC25A11Q02978 314 aaKnown RBP14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 ELF2Q15723 593 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 CDO1Q16878 200 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 C15orf59Q2T9L4 293 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 SLC25A52Q3SY17 297 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 DCAF6Q58WW2 860 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 DAB2IPQ5VWQ8 1189 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 TPGS2Q68CL5 300 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 SLC8B1Q6J4K2 584 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 C8orf74Q6P047 294 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 SCYL2Q6P3W7 929 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 PRSS55Q6UWB4 352 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 TMCO2Q7Z6W1 182 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 MAP7D3Q8IWC1 876 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 NUP93Q8N1F7 819 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 ARHGAP18Q8N392 663 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 CMASQ8NFW8 434 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 TEKT4Q8WW24 435 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 RUNDC3BQ96NL0 473 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 NPY6RQ99463 290 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 RAD9AQ99638 391 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 C11orf84Q9BUA3 381 aaPredicted RBP14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 AP1M1Q9BXS5 423 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 OSBPL8Q9BZF1 889 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 SLITRK6Q9H5Y7 841 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 ZWILCHQ9H900 591 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 HSFX1Q9UBD0 423 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 PCSK1NQ9UHG2 260 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 EFR3BQ9Y2G0 817 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 CDY1Q9Y6F8 540 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 CENPFP49454 3210 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 VWA8A3KMH1 1905 aa14.31□□□□□ -0.12
CALCOCO1-214ENST00000549613 LRRD1A4D1F6 860 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 MTMR11A4FU01 709 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 TNFRSF10BO14763 440 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 ENDOD1O94919 500 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 TJP3O95049 919 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 RTN3O95197 1032 aaPredicted RBP14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 F9P00740 461 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 URODP06132 367 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 RHOXF2BP0C7M4 288 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 RARAP10276 462 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 HAPLN1P10915 354 aaPredicted RBP14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 TUFMP49411 452 aaKnown RBP14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 SULT1E1P49888 294 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 CREMQ03060 361 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 PDK2Q15119 407 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 ATP13A4Q4VNC1 1196 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 SPOCD1Q6ZMY3 1216 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 GPRIN1Q7Z2K8 1008 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 MAATS1Q7Z4T9 603 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 HERC6Q8IVU3 1022 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 KLHL7Q8IXQ5 586 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 ATAD1Q8NBU5 361 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 KCTD6Q8NC69 237 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 NDRG1Q92597 394 aaKnown RBP14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 RUBCNQ92622 972 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 DPF3Q92784 378 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 RNF25Q96BH1 459 aaPredicted RBP14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 SPATA17Q96L03 361 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 SLITRK1Q96PX8 696 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 KRT12Q99456 494 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 RHOXF2Q9BQY4 288 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 TMEM30AQ9NV96 361 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 ARGLU1Q9NWB6 273 aaPredicted RBP14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 AFF4Q9UHB7 1163 aaKnown RBP14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 MAFFQ9ULX9 164 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 TRIOBPQ9H2D6 2365 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 COL4A6Q14031 1691 aa14.3□□□□□ -0.12
CALCOCO1-214ENST00000549613 NLRC5Q86WI3 1866 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 PTPRDP23468 1912 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 ALPK3Q96L96 1907 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 A0A0C4DFX4 3053 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 YJEFN3A6XGL0 299 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 E7ENQ6 273 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 RALAP11233 206 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 TCF4P15884 667 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 KDELR1P24390 212 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 CHRNA3P32297 505 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 OR1D2P34982 312 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 CDR1P51861 262 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 RABGGTBP53611 331 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 SLC5A3P53794 718 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 EPHB4P54760 987 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 MGAT5BQ3V5L5 792 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 TFDP3Q5H9I0 405 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 SH3PXD2AQ5TCZ1 1133 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 BSPRYQ5W0U4 402 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 BTBD8Q5XKL5 378 aa14.29□□□□□ -0.12
CALCOCO1-214ENST00000549613 AADACL2Q6P093 401 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms