RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 CCSER2Q9H7U1 834 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.89□□□□□ -0.83
YBX3-218ENST00000546298 SEMA4GQ9NTN9 838 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 RAB20Q9NX57 234 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 HMGXB4Q9UGU5 601 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 EBF1Q9UH73 591 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 LSM7Q9UK45 103 aaKnown RBP9.89□□□□□ -0.83
YBX3-218ENST00000546298 SCML2Q9UQR0 700 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 PCDHA5Q9Y5H7 936 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 TRIOO75962 3097 aa9.89□□□□□ -0.83
YBX3-218ENST00000546298 A0A0A0MRY4 1105 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 PSMA7O14818 248 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 BEST1O76090 585 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 RHOBTB1O94844 696 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 KAT7O95251 611 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 RALAP11233 206 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 TGM1P22735 817 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 TNFRSF4P43489 277 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 PXNP49023 591 aaPredicted RBP9.88□□□□□ -0.83
YBX3-218ENST00000546298 SLC8A3P57103 927 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 YWHAEP62258 255 aaKnown RBP9.88□□□□□ -0.83
YBX3-218ENST00000546298 LRRC63Q05C16 580 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 ELF2Q15723 593 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 USP39Q53GS9 565 aaKnown RBP9.88□□□□□ -0.83
YBX3-218ENST00000546298 C2orf27AQ580R0 203 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 LY6G5CQ5SRR4 150 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 TCERG1LQ5VWI1 586 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 KLHDC10Q6PID8 442 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 CLEC20AQ6ZU45 233 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 C11orf74Q86VG3 221 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 ELOA2Q8IYF1 753 aaPredicted RBP9.88□□□□□ -0.83
YBX3-218ENST00000546298 ENGASEQ8NFI3 743 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 NETO1Q8TDF5 533 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 WHAMMQ8TF30 809 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 EZH1Q92800 747 aaPredicted RBP9.88□□□□□ -0.83
YBX3-218ENST00000546298 TMEM176AQ96HP8 235 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 HHIPQ96QV1 700 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 TWNKQ96RR1 684 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 CDK5RAP1Q96SZ6 601 aaKnown RBP9.88□□□□□ -0.83
YBX3-218ENST00000546298 DUSP16Q9BY84 665 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 UBXN6Q9BZV1 441 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 METTL14Q9HCE5 456 aaKnown RBP9.88□□□□□ -0.83
YBX3-218ENST00000546298 PARD6AQ9NPB6 346 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 CYLDQ9NQC7 956 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 ARHGEF4Q9NR80 690 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 ARMCX3Q9UH62 379 aaPredicted RBP9.88□□□□□ -0.83
YBX3-218ENST00000546298 PCDHGA5Q9Y5G8 931 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 MIA3Q5JRA6 1907 aa9.88□□□□□ -0.83
YBX3-218ENST00000546298 TBC1D3BA6NDS4 549 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 K7EQS6 105 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 SCAMP3O14828 347 aaKnown RBP9.87□□□□□ -0.83
YBX3-218ENST00000546298 HOXC11O43248 304 aaPredicted RBP9.87□□□□□ -0.83
YBX3-218ENST00000546298 ALDH1A2O94788 518 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 PLA2G4AP47712 749 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 SLC6A11P48066 632 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 DGKEP52429 567 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 KIF11P52732 1056 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 SEC13P55735 322 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 GAB4Q2WGN9 574 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 ANO4Q32M45 955 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 ZNF394Q53GI3 561 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 DCAF17Q5H9S7 520 aaPredicted RBP9.87□□□□□ -0.83
YBX3-218ENST00000546298 EOGTQ5NDL2 527 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 C10orf120Q5SQS8 335 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 ANKRD40Q6AI12 368 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 HTR3DQ70Z44 454 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 BBS7Q8IWZ6 715 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 ARHGAP18Q8N392 663 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 ZNF276Q8N554 614 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 SPATA20Q8TB22 786 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 KCNV2Q8TDN2 545 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 SEMA4DQ92854 862 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 JAKMIP2Q96AA8 810 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 EEF2KMTQ96G04 330 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 DHTKD1Q96HY7 919 aaPredicted RBP9.87□□□□□ -0.83
YBX3-218ENST00000546298 ZC3H10Q96K80 434 aaKnown RBP9.87□□□□□ -0.83
YBX3-218ENST00000546298 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
YBX3-218ENST00000546298 KLF16Q9BXK1 252 aaPredicted RBP9.87□□□□□ -0.83
YBX3-218ENST00000546298 POLMQ9NP87 494 aaPredicted RBP9.87□□□□□ -0.83
YBX3-218ENST00000546298 SPHK2Q9NRA0 654 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 CISHQ9NSE2 258 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 WDR35Q9P2L0 1181 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 DEC1Q9P2X7 70 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 DNMT3LQ9UJW3 386 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 NAGPAQ9UK23 515 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 MMP17Q9ULZ9 603 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 COL4A2P08572 1712 aa9.87□□□□□ -0.83
YBX3-218ENST00000546298 A0A1W2PQH9 124 aa9.86□□□□□ -0.83
YBX3-218ENST00000546298 HHLA1C9JL84 531 aa9.86□□□□□ -0.83
YBX3-218ENST00000546298 ZBTB24O43167 697 aaPredicted RBP9.86□□□□□ -0.83
YBX3-218ENST00000546298 CYP26A1O43174 497 aa9.86□□□□□ -0.83
YBX3-218ENST00000546298 EPN2O95208 641 aa9.86□□□□□ -0.83
YBX3-218ENST00000546298 TBX18O95935 607 aa9.86□□□□□ -0.83
YBX3-218ENST00000546298 ZNF806P0C7X5 589 aa9.86□□□□□ -0.83
YBX3-218ENST00000546298 IRF1P10914 325 aa9.86□□□□□ -0.83
YBX3-218ENST00000546298 RARGP13631 454 aa9.86□□□□□ -0.83
YBX3-218ENST00000546298 TBXAS1P24557 533 aaPredicted RBP9.86□□□□□ -0.83
YBX3-218ENST00000546298 ATXN1P54253 815 aaKnown RBP9.86□□□□□ -0.83
YBX3-218ENST00000546298 COG7P83436 770 aa9.86□□□□□ -0.83
YBX3-218ENST00000546298 CETN1Q12798 172 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms