RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 LHX5Q9H2C1 402 aa18.81■□□□□ 0.6
TSFM-208ENST00000543727 SMOC2Q9H3U7 446 aa18.81■□□□□ 0.6
TSFM-208ENST00000543727 C11orf16Q9NQ32 467 aa18.81■□□□□ 0.6
TSFM-208ENST00000543727 ARHGEF3Q9NR81 526 aa18.81■□□□□ 0.6
TSFM-208ENST00000543727 CHORDC1Q9UHD1 332 aaPredicted RBP18.81■□□□□ 0.6
TSFM-208ENST00000543727 AJAP1Q9UKB5 411 aaPredicted RBP18.81■□□□□ 0.6
TSFM-208ENST00000543727 CEP83Q9Y592 693 aa18.81■□□□□ 0.6
TSFM-208ENST00000543727 KMT2EQ8IZD2 1858 aa18.81■□□□□ 0.6
TSFM-208ENST00000543727 ARNTLO00327 626 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 COCHO43405 550 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 SERPINC1P01008 464 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 CLCN1P35523 988 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 GPD2P43304 727 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 JAM2P57087 298 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 SNX16P57768 344 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 POLR2FP61218 127 aaKnown RBP18.8■□□□□ 0.6
TSFM-208ENST00000543727 GOLGA8FQ08AF8 430 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 GOLGA8DPQ0D2H9 430 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 ADIGQ0VDE8 80 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 GRM2Q14416 872 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 MTF1Q14872 753 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 PDGFRLQ15198 375 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 ZNF677Q86XU0 584 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 NOX5Q96PH1 765 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 SPAG5Q96R06 1193 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 SLC22A12Q96S37 553 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 CYP2S1Q96SQ9 504 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 TRIM62Q9BVG3 475 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 NACA2Q9H009 215 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 TSPY26PQ9H489 355 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
TSFM-208ENST00000543727 MYO6Q9UM54 1294 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 CCL26Q9Y258 94 aa18.8■□□□□ 0.6
TSFM-208ENST00000543727 SLC9A3R1O14745 358 aaPredicted RBP18.79■□□□□ 0.6
TSFM-208ENST00000543727 MBL2P11226 248 aaPredicted RBP18.79■□□□□ 0.6
TSFM-208ENST00000543727 KRT9P35527 623 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 ATP5C1P36542 298 aaKnown RBP18.79■□□□□ 0.6
TSFM-208ENST00000543727 MLF2Q15773 248 aaPredicted RBP18.79■□□□□ 0.6
TSFM-208ENST00000543727 PMF1Q6P1K2 205 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 SIX5Q8N196 739 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 CSGALNACT1Q8TDX6 532 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 SH3RF2Q8TEC5 729 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 ULBP1Q9BZM6 244 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 RNF38Q9H0F5 515 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 SMG9Q9H0W8 520 aaKnown RBP18.79■□□□□ 0.6
TSFM-208ENST00000543727 MFSD1Q9H3U5 465 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 OLA1Q9NTK5 396 aaKnown RBP18.79■□□□□ 0.6
TSFM-208ENST00000543727 DNMT3LQ9UJW3 386 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 NAGPAQ9UK23 515 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 CPQQ9Y646 472 aa18.79■□□□□ 0.6
TSFM-208ENST00000543727 A0A1W2PQH9 124 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 TULP2O00295 520 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 CCDC172P0C7W6 258 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 CYP11B1P15538 503 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 SOX5P35711 763 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 STAT1P42224 750 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 STARD6P59095 220 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 ZNF445P59923 1031 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 YWHAGP61981 247 aaKnown RBP eCLIP18.78■□□□□ 0.6
TSFM-208ENST00000543727 SLC44A4Q53GD3 710 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 SCD5Q86SK9 330 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 SLC47A2Q86VL8 602 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 FBXL6Q8N531 539 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 ST13P5Q8NFI4 369 aaPredicted RBP18.78■□□□□ 0.6
TSFM-208ENST00000543727 OSCP1Q8WVF1 389 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 GOLGA1Q92805 767 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 ATP2A3Q93084 1043 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 PBXIP1Q96AQ6 731 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 OTUB2Q96DC9 234 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 IQCDQ96DY2 449 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 LRRC3BQ96PB8 259 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 FAM83CQ9BQN1 747 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 SLC4A5Q9BY07 1137 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 C8orf33Q9H7E9 229 aaPredicted RBP18.78■□□□□ 0.6
TSFM-208ENST00000543727 CCSER2Q9H7U1 834 aa18.78■□□□□ 0.6
TSFM-208ENST00000543727 E2F8A0AVK6 867 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 LEFTY2O00292 366 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 MAN2B1O00754 1011 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 LSM8O95777 96 aaKnown RBP18.77■□□□□ 0.6
TSFM-208ENST00000543727 TPM3P06753 285 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 RARGP13631 454 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 KLK7P49862 253 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 CLCN5P51795 746 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 DAOAP59103 153 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 AMPD2Q01433 879 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 TMEM110Q86TL2 294 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 SUGP1Q8IWZ8 645 aaKnown RBP18.77■□□□□ 0.6
TSFM-208ENST00000543727 EPS8L1Q8TE68 723 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 ZFRQ96KR1 1074 aaKnown RBP18.77■□□□□ 0.6
TSFM-208ENST00000543727 NELL2Q99435 816 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 DDX23Q9BUQ8 820 aaKnown RBP18.77■□□□□ 0.6
TSFM-208ENST00000543727 OSBPL6Q9BZF3 934 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 EDEM3Q9BZQ6 932 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 NMUR1Q9HB89 426 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 ABCC13Q9NSE7 274 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 OSER1Q9NX31 292 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 TBC1D14Q9P2M4 693 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 CA14Q9ULX7 337 aa18.77■□□□□ 0.6
TSFM-208ENST00000543727 MRPS17Q9Y2R5 130 aaKnown RBP18.77■□□□□ 0.6
TSFM-208ENST00000543727 KRBA1A5PL33 1030 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms