RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 TAF11Q15544 211 aa15.41■□□□□ 0.06
DDX55-209ENST00000542286 ZNF792Q3KQV3 632 aa15.41■□□□□ 0.06
DDX55-209ENST00000542286 CCDC14Q49A88 953 aa15.41■□□□□ 0.06
DDX55-209ENST00000542286 TMPRSS4Q9NRS4 437 aa15.41■□□□□ 0.06
DDX55-209ENST00000542286 CPSF2Q9P2I0 782 aaKnown RBP15.41■□□□□ 0.06
DDX55-209ENST00000542286 BARX2Q9UMQ3 279 aaPredicted RBP15.41■□□□□ 0.06
DDX55-209ENST00000542286 CLEC11AQ9Y240 323 aa15.41■□□□□ 0.06
DDX55-209ENST00000542286 C2CD4BA6NLJ0 364 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 BTBD19C9JJ37 291 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 GPD1P21695 349 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 LMO2P25791 158 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 ATP5DP30049 168 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 TAP1Q03518 808 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 LAMC2Q13753 1193 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 DPYSL3Q14195 570 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 FASTKD5Q7L8L6 764 aaKnown RBP15.4■□□□□ 0.06
DDX55-209ENST00000542286 POLNQ7Z5Q5 900 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 DPP9Q86TI2 863 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 OSBPL1AQ9BXW6 950 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 ARHGEF3Q9NR81 526 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 LAMA3Q16787 3333 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 SYNJ2BP-COX16A0A087WUM0 186 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 ASB14A6NK59 587 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 IL4RP24394 825 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 ADRA1DP25100 572 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 HOXA11P31270 313 aaPredicted RBP15.4■□□□□ 0.06
DDX55-209ENST00000542286 ELK3P41970 407 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 SLC26A2P50443 739 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 OVGP1Q12889 678 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 ZNF484Q5JVG2 852 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 ECHDC2Q86YB7 292 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 PPIL6Q8IXY8 311 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 CMASQ8NFW8 434 aaPredicted RBP15.4■□□□□ 0.06
DDX55-209ENST00000542286 OR6B3Q8NGW1 331 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 FAM172AQ8WUF8 416 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 NAF1Q96HR8 494 aaKnown RBP15.4■□□□□ 0.06
DDX55-209ENST00000542286 PAFAH2Q99487 392 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 PITPNM3Q9BZ71 974 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 COX16Q9P0S2 106 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 SLC17A7Q9P2U7 560 aa15.4■□□□□ 0.06
DDX55-209ENST00000542286 DICER1Q9UPY3 1922 aaKnown RBP15.4■□□□□ 0.06
DDX55-209ENST00000542286 MCF2LO15068 1137 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 ASMTLO95671 621 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 FESP07332 822 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 VDRP11473 427 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 ZNF143P52747 638 aaPredicted RBP15.39■□□□□ 0.05
DDX55-209ENST00000542286 YARSP54577 528 aaKnown RBP15.39■□□□□ 0.05
DDX55-209ENST00000542286 SNAPC2Q13487 334 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 KRT81Q14533 505 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 TRIM68Q6AZZ1 485 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 ARHGEF18Q6ZSZ5 1173 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 PRPF39Q86UA1 669 aaKnown RBP15.39■□□□□ 0.05
DDX55-209ENST00000542286 CCDC125Q86Z20 511 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 NT5C1AQ9BXI3 368 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 KATNBL1Q9H079 304 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 KCNN4O15554 427 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 LCP1P13796 627 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 RBL1P28749 1068 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 SLC30A9Q6PML9 568 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 RELL1Q8IUW5 271 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 PALM2Q8IXS6 379 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 GBP7Q8N8V2 638 aaPredicted RBP15.39■□□□□ 0.05
DDX55-209ENST00000542286 CCDC110Q8TBZ0 833 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 TMEM40Q8WWA1 233 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 KHSRPQ92945 711 aaKnown RBP eCLIP15.39■□□□□ 0.052e-6■■■■□ 20.7
DDX55-209ENST00000542286 CFAP36Q96G28 342 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 SHOC2Q9UQ13 582 aa15.39■□□□□ 0.05
DDX55-209ENST00000542286 CCL15-CCL14A0A0B4J2E2 113 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 APOC4-APOC2K7ER74 178 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 DYNC1LI2O43237 492 aaPredicted RBP15.38■□□□□ 0.05
DDX55-209ENST00000542286 PAPSS1O43252 624 aaPredicted RBP15.38■□□□□ 0.05
DDX55-209ENST00000542286 PRPSAP2O60256 369 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 SUN1O94901 812 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 APOC2P02655 101 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 CCNG1P51959 295 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 RBP5P82980 135 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 CCL15Q16663 113 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 PPP1R2P3Q6NXS1 205 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 LVRNQ6Q4G3 990 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 PYROXD2Q8N2H3 581 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 PPTC7Q8NI37 304 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 MAGEB18Q96M61 343 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 PGLYRP2Q96PD5 576 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 SMC6Q96SB8 1091 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 CEP41Q9BYV8 373 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 RAB6BQ9NRW1 208 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 TRIP12Q14669 1992 aaPredicted RBP15.38■□□□□ 0.05
DDX55-209ENST00000542286 KBTBD13C9JR72 458 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 SPTLC1O15269 473 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 AHCYL1O43865 530 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 UGT1A9O60656 530 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 ABHD2P08910 425 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 NEFHP12036 1026 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 PTPN7P35236 360 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 RAB27AP51159 221 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 YWHAGP61981 247 aaKnown RBP eCLIP15.38■□□□□ 0.05
DDX55-209ENST00000542286 ROR1Q01973 937 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 CATSPER4Q7RTX7 472 aa15.38■□□□□ 0.05
DDX55-209ENST00000542286 PQLC3Q8N755 202 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms