RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CDK5RAP1Q96SZ6 601 aaKnown RBP20.43■□□□□ 0.86
DDX55-207ENST00000540763 ULBP1Q9BZM6 244 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 AIPL1Q9NZN9 384 aa20.43■□□□□ 0.86
DDX55-207ENST00000540763 C2orf78A6NCI8 922 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 LRRC53A6NM62 1247 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 SART1O43290 800 aaKnown RBP20.42■□□□□ 0.86
DDX55-207ENST00000540763 CFHP08603 1231 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 SLC7A9P82251 487 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 TDGQ13569 410 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 HECTD3Q5T447 861 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 SPECC1LQ69YQ0 1117 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 TADA2BQ86TJ2 420 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 WDTC1Q8N5D0 677 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 CELF5Q8N6W0 485 aaKnown RBP20.42■□□□□ 0.86
DDX55-207ENST00000540763 KIAA1958Q8N8K9 716 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 ZNF397Q8NF99 534 aaPredicted RBP20.42■□□□□ 0.86
DDX55-207ENST00000540763 SYN2Q92777 582 aaPredicted RBP20.42■□□□□ 0.86
DDX55-207ENST00000540763 PDCL3Q9H2J4 239 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 TRPC7Q9HCX4 862 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 TDP1Q9NUW8 608 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 CHORDC1Q9UHD1 332 aaPredicted RBP20.42■□□□□ 0.86
DDX55-207ENST00000540763 CYTH4Q9UIA0 394 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 CAPN11Q9UMQ6 739 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 ARHGAP26Q9UNA1 814 aa20.42■□□□□ 0.86
DDX55-207ENST00000540763 GABBR2O75899 941 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 CKMP06732 381 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 MMEP08473 750 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 HDCP19113 662 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 PRKCIP41743 596 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 RGS7P49802 495 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 DAOAP59103 153 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 ZBED6P86452 979 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 FMO1Q01740 532 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 BHLHA9Q7RTU4 235 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 SCD5Q86SK9 330 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 VSTM4Q8IW00 320 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.41■□□□□ 0.86
DDX55-207ENST00000540763 COL4A2P08572 1712 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 PIEZO1Q92508 2521 aa20.41■□□□□ 0.86
DDX55-207ENST00000540763 A0A1W2PQH9 124 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 DPYSL4O14531 572 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 DCXO43602 365 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 TLR5O60602 858 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 PRAMEF12O95522 483 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 ABL1P00519 1130 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 GYPCP04921 128 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 ASGR2P07307 311 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 RALAP11233 206 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 YWHAGP61981 247 aaKnown RBP eCLIP20.4■□□□□ 0.86
DDX55-207ENST00000540763 USP4Q13107 963 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 SFMBT2Q5VUG0 894 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 TAF3Q5VWG9 929 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 TANGO2Q6ICL3 276 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 IRF2BP2Q7Z5L9 587 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 DDX42Q86XP3 938 aaKnown RBP eCLIP20.4■□□□□ 0.86
DDX55-207ENST00000540763 PASD1Q8IV76 773 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 MFSD6LQ8IWD5 586 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 UBALD2Q8IYN6 164 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 SLC44A3Q8N4M1 653 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 ARL14EPQ8N8R7 260 aaPredicted RBP20.4■□□□□ 0.86
DDX55-207ENST00000540763 MSANTD4Q8NCY6 345 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 C1orf131Q8NDD1 294 aaKnown RBP20.4■□□□□ 0.86
DDX55-207ENST00000540763 IPO4Q8TEX9 1081 aaKnown RBP20.4■□□□□ 0.86
DDX55-207ENST00000540763 USP13Q92995 863 aaPredicted RBP20.4■□□□□ 0.86
DDX55-207ENST00000540763 PPP1R13BQ96KQ4 1090 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 KXD1Q9BQD3 176 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 TRIM62Q9BVG3 475 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 TRIM5Q9C035 493 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 MIS12Q9H081 205 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 NMUR1Q9HB89 426 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 ST7Q9NRC1 585 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 NAGPAQ9UK23 515 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 DUSP12Q9UNI6 340 aa20.4■□□□□ 0.86
DDX55-207ENST00000540763 HEPACAM2A8MVW5 462 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 E5RJQ4 531 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 COCHO43405 550 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 CYP1A1P04798 512 aaPredicted RBP20.39■□□□□ 0.85
DDX55-207ENST00000540763 SRFP11831 508 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 LCP1P13796 627 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 PSMC3P17980 439 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 NOMO3P69849 1222 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 PLCB2Q00722 1185 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 FCHO2Q0JRZ9 810 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 ASIC2Q16515 512 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 VITQ6UXI7 678 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 BEND5Q7L4P6 421 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 ZDHHC17Q8IUH5 632 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 SLC20A1Q8WUM9 679 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 RSAD2Q8WXG1 361 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 SLC22A12Q96S37 553 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 CPXM1Q96SM3 734 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 OLA1Q9NTK5 396 aaKnown RBP20.39■□□□□ 0.85
DDX55-207ENST00000540763 OSER1Q9NX31 292 aa20.39■□□□□ 0.85
DDX55-207ENST00000540763 LUC7L2Q9Y383 392 aaKnown RBP20.39■□□□□ 0.85
DDX55-207ENST00000540763 AP5Z1O43299 807 aa20.38■□□□□ 0.85
DDX55-207ENST00000540763 RARGP13631 454 aa20.38■□□□□ 0.85
DDX55-207ENST00000540763 CHRNB2P17787 502 aa20.38■□□□□ 0.85
DDX55-207ENST00000540763 ATP5C1P36542 298 aaKnown RBP20.38■□□□□ 0.85
DDX55-207ENST00000540763 VIPR2P41587 438 aa20.38■□□□□ 0.85
DDX55-207ENST00000540763 GABRB2P47870 512 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms