RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 FBXL19Q6PCT2 694 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 ZNF574Q6ZN55 896 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 ADAT2Q7Z6V5 191 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 BBS7Q8IWZ6 715 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 PDCL2Q8N4E4 241 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 EID2Q8N6I1 236 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 C1orf216Q8TAB5 229 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 TSC1Q92574 1164 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 IGSF8Q969P0 613 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 GABRG3Q99928 467 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 TRIM9Q9C026 710 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 MKRN2Q9H000 416 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 BRMS1Q9HCU9 246 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 TM9SF3Q9HD45 589 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 ITM2CQ9NQX7 267 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 SPHK2Q9NRA0 654 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 WDR70Q9NW82 654 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 DPP3Q9NY33 737 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 USP36Q9P275 1121 aaKnown RBP11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 TBC1D14Q9P2M4 693 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 NFE2L3Q9Y4A8 694 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 PCDHGA1Q9Y5H4 931 aa11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.8□□□□□ -0.52
CTNNA1-234ENST00000522227 ZNF840PA6NDX5 716 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 NEDD8-MDP1E9PL57 170 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 OGTO15294 1046 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 PCDHGA12O60330 932 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 PAX3P23760 479 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 ACADVLP49748 655 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 LIG4P49917 911 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 STARD3Q14849 445 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 SV2CQ496J9 727 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 DIEXFQ68CQ4 756 aaKnown RBP11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 ZPBP2Q6X784 338 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 OSTM1Q86WC4 334 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 FBXL16Q8N461 479 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 TMEM161BQ8NDZ6 487 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 LEO1Q8WVC0 666 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 KCNE4Q8WWG9 221 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 BHMTQ93088 406 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 WBP2Q969T9 261 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 MSTO1Q9BUK6 570 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 C6orf106Q9H6K1 298 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 ABCB6Q9NP58 842 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 SH3BP1Q9Y3L3 701 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 STON1Q9Y6Q2 735 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 MYO9AB2RTY4 2548 aa11.79□□□□□ -0.52
CTNNA1-234ENST00000522227 TERTO14746 1132 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 HOXC11O43248 304 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 ATP2C2O75185 946 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 MPOP05164 745 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 MAPTP10636 758 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 ACADMP11310 421 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 BDNFP23560 247 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 ACOT2P49753 483 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 MYL7Q01449 175 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 ZNF174Q15697 407 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 HAUS3Q68CZ6 603 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 HIST2H2BCQ6DN03 193 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 TPGS1Q6ZTW0 290 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 TMPRSS6Q8IU80 811 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 DHX40Q8IX18 779 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 SIPA1Q96FS4 1042 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 ZNF274Q96GC6 653 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 NUP58Q9BVL2 599 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 ORC3Q9UBD5 711 aaPredicted RBP11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 L1RE1Q9UN81 338 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 STARD13Q9Y3M8 1113 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 PCDHB1Q9Y5F3 818 aa11.78□□□□□ -0.52
CTNNA1-234ENST00000522227 LAD1O00515 517 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 HNRNPDLO14979 420 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 FAM189A1O60320 539 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 FSBPO95073 299 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 ITGAVP06756 1048 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 OR52Z1P0C646 297 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 ABCB4P21439 1286 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 PSMA5P28066 241 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 OXTRP30559 389 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 SMTNP53814 917 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 C21orf59P57076 290 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 PSMC1P62191 440 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 UBAP2LQ14157 1087 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 RINT1Q6NUQ1 792 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 ATG14Q6ZNE5 492 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 DENND5BQ6ZUT9 1274 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 DDX42Q86XP3 938 aaKnown RBP eCLIP11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 EXD3Q8N9H8 876 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 SNX29Q8TEQ0 813 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 PRCCQ92733 491 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 PKMYT1Q99640 499 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 ACBD6Q9BR61 282 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 BBS2Q9BXC9 721 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 MAGEC2Q9UBF1 373 aaPredicted RBP11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 CLCA2Q9UQC9 943 aa11.77□□□□□ -0.53
CTNNA1-234ENST00000522227 TRAK2O60296 914 aa11.76□□□□□ -0.53
CTNNA1-234ENST00000522227 HUS1O60921 280 aa11.76□□□□□ -0.53
CTNNA1-234ENST00000522227 KRT38O76015 456 aa11.76□□□□□ -0.53
CTNNA1-234ENST00000522227 CDKL5O76039 1030 aa11.76□□□□□ -0.53
CTNNA1-234ENST00000522227 OAS1P00973 400 aaKnown RBP11.76□□□□□ -0.53
CTNNA1-234ENST00000522227 C1SP09871 688 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms