RNA–Protein interactions for RNA: ENST00000495554.1

CHTOP-206, Transcript of chromatin target of PRMT1, humanhuman

TSL 2

Gene CHTOP, Length 2,553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-206ENST00000495554 DENND1AQ8TEH3 1009 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 GRAMD1AQ96CP6 724 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 RNF19AQ9NV58 838 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 XPO7Q9UIA9 1087 aaKnown RBP15.42■□□□□ 0.06
CHTOP-206ENST00000495554 ARL2BPQ9Y2Y0 163 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 NME7Q9Y5B8 376 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.42■□□□□ 0.06
CHTOP-206ENST00000495554 DPYSL4O14531 572 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 GRAP2O75791 330 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 TSHRP16473 764 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 DESP17661 470 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 YARSP54577 528 aaKnown RBP15.42■□□□□ 0.06
CHTOP-206ENST00000495554 BASP1P80723 227 aaKnown RBP15.42■□□□□ 0.06
CHTOP-206ENST00000495554 CDO1Q16878 200 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 CCDC14Q49A88 953 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 PMF1Q6P1K2 205 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 DARS2Q6PI48 645 aaKnown RBP15.42■□□□□ 0.06
CHTOP-206ENST00000495554 TMEM110Q86TL2 294 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 LRRC52Q8N7C0 313 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 GBP7Q8N8V2 638 aaPredicted RBP15.42■□□□□ 0.06
CHTOP-206ENST00000495554 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.42■□□□□ 0.06
CHTOP-206ENST00000495554 DNAJB3Q8WWF6 145 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 SNX27Q96L92 541 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 RNF157Q96PX1 679 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 MRPL45Q9BRJ2 306 aaKnown RBP15.42■□□□□ 0.06
CHTOP-206ENST00000495554 SLC4A5Q9BY07 1137 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 KLC4Q9NSK0 619 aa15.42■□□□□ 0.06
CHTOP-206ENST00000495554 TREHO43280 583 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 SPAG7O75391 227 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 TMEM63AO94886 807 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 TAC1P20366 129 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 CYP2B6P20813 491 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 SSTR1P30872 391 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 RGS7P49802 495 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 SPARCL1Q14515 664 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 KRT81Q14533 505 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 MTFR1Q15390 333 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 TAF1CQ15572 869 aaPredicted RBP15.41■□□□□ 0.06
CHTOP-206ENST00000495554 KLHL38Q2WGJ6 581 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 ACOT1Q86TX2 421 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 ZC3H18Q86VM9 953 aaKnown RBP15.41■□□□□ 0.06
CHTOP-206ENST00000495554 PALM2Q8IXS6 379 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 FBXO36Q8NEA4 188 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 BEST2Q8NFU1 509 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 TEKT4Q8WW24 435 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 TBCBQ99426 244 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 ACSS3Q9H6R3 686 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 HESX1Q9UBX0 185 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 TCRBV7S3A2A0A539 114 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 ATP2A2P16615 1042 aaKnown RBP15.41■□□□□ 0.06
CHTOP-206ENST00000495554 SDC4P31431 198 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 PSEN2P49810 448 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 ZNF157P51786 506 aaPredicted RBP15.41■□□□□ 0.06
CHTOP-206ENST00000495554 ATP11AP98196 1134 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 BEX3Q00994 111 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 SLC6A3Q01959 620 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 RNASELQ05823 741 aaKnown RBP15.41■□□□□ 0.06
CHTOP-206ENST00000495554 PCBP1Q15365 356 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHTOP-206ENST00000495554 RAB6CQ53S08 254 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 CCDC91Q7Z6B0 441 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 SESTD1Q86VW0 696 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 UNC93AQ86WB7 457 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 TTC30AQ86WT1 665 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 FUKQ8N0W3 1084 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 STK32AQ8WU08 396 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 SLC35F5Q8WV83 523 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 C18orf25Q96B23 403 aaPredicted RBP15.41■□□□□ 0.06
CHTOP-206ENST00000495554 PITPNM3Q9BZ71 974 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 RAB6CQ9H0N0 254 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 SSU72Q9NP77 194 aaKnown RBP15.41■□□□□ 0.06
CHTOP-206ENST00000495554 ABCF3Q9NUQ8 709 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 PRKAG3Q9UGI9 489 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 TUBGCP4Q9UGJ1 667 aa15.41■□□□□ 0.06
CHTOP-206ENST00000495554 FOXN2P32314 431 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 BBS9Q3SYG4 887 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 NOTUMQ6P988 496 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 NPNTQ6UXI9 565 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 VSIG1Q86XK7 387 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 ZDHHC17Q8IUH5 632 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 TAB3Q8N5C8 712 aaPredicted RBP15.4■□□□□ 0.06
CHTOP-206ENST00000495554 NXF3Q9H4D5 531 aaKnown RBP15.4■□□□□ 0.06
CHTOP-206ENST00000495554 KIF9Q9HAQ2 790 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 NGRNQ9NPE2 291 aaKnown RBP15.4■□□□□ 0.06
CHTOP-206ENST00000495554 NMRK2Q9NPI5 230 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 HAUS2Q9NVX0 235 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.4■□□□□ 0.06
CHTOP-206ENST00000495554 CA4P22748 312 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 SCYL2Q6P3W7 929 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 ADGRD1Q6QNK2 874 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 RGS9BPQ6ZS82 235 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 SCUBE3Q8IX30 993 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 PLD5Q8N7P1 536 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 FAM172AQ8WUF8 416 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 MRRFQ96E11 262 aaKnown RBP15.4■□□□□ 0.06
CHTOP-206ENST00000495554 WDR83Q9BRX9 315 aaKnown RBP15.4■□□□□ 0.06
CHTOP-206ENST00000495554 DHRS4Q9BTZ2 278 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 FAM49BQ9NUQ9 324 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 DNAH12Q6ZR08 3092 aa15.4■□□□□ 0.06
CHTOP-206ENST00000495554 ANKRD33BA6NCL7 494 aa15.39■□□□□ 0.05
CHTOP-206ENST00000495554 H7C0C1 242 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms