RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 LRRC3BQ96PB8 259 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 KCNK16Q96T55 309 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 ANP32EQ9BTT0 268 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 TRIM62Q9BVG3 475 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 DUSP16Q9BY84 665 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 DPEP3Q9H4B8 488 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 SPHK2Q9NRA0 654 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 RBM12Q9NTZ6 932 aaKnown RBP7.89□□□□□ -1.15
CPNE1-226ENST00000486021 IL37Q9NZH6 218 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 BCCIPQ9P287 314 aaKnown RBP eCLIP7.89□□□□□ -1.15
CPNE1-226ENST00000486021 CFAP97Q9P2B7 532 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 CHORDC1Q9UHD1 332 aaPredicted RBP7.89□□□□□ -1.15
CPNE1-226ENST00000486021 MMP17Q9ULZ9 603 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 MAPK8IP1Q9UQF2 711 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 WNT6Q9Y6F9 365 aa7.89□□□□□ -1.15
CPNE1-226ENST00000486021 TYW5A2RUC4 315 aaKnown RBP7.88□□□□□ -1.15
CPNE1-226ENST00000486021 TBC1D3BA6NDS4 549 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 SHISA7A6NL88 538 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 K7ESF4 209 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 CLDN5O00501 218 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 TNFRSF10BO14763 440 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 MAP3K13O43283 966 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 CILPO75339 1184 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 ZNF217O75362 1048 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 VNN1O95497 513 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 EGFP01133 1207 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 TDGF1P13385 188 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 CD58P19256 250 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 ACO1P21399 889 aaKnown RBP7.88□□□□□ -1.15
CPNE1-226ENST00000486021 ADORA2BP29275 332 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 GBP1P32455 592 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 ASPAP45381 313 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 RAP1GAPP47736 663 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 CDR1P51861 262 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 BCAT1P54687 386 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 SNX16P57768 344 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 DLG4P78352 724 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 ARID5AQ03989 594 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 SPEM2Q0P670 501 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 RSPO4Q2I0M5 234 aaPredicted RBP7.88□□□□□ -1.15
CPNE1-226ENST00000486021 SGO2Q562F6 1265 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 SLC36A4Q6YBV0 504 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 HTR3DQ70Z44 454 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 RSRC2Q7L4I2 434 aaKnown RBP7.88□□□□□ -1.15
CPNE1-226ENST00000486021 CCDC117Q8IWD4 279 aaPredicted RBP7.88□□□□□ -1.15
CPNE1-226ENST00000486021 FUKQ8N0W3 1084 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 FMR1NBQ8N0W7 255 aaPredicted RBP7.88□□□□□ -1.15
CPNE1-226ENST00000486021 PGBD3Q8N328 593 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 TRIML1Q8N9V2 468 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 WHAMMQ8TF30 809 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 RNF139Q8WU17 664 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 IPO9Q96P70 1041 aaKnown RBP7.88□□□□□ -1.15
CPNE1-226ENST00000486021 IRX2Q9BZI1 471 aaPredicted RBP7.88□□□□□ -1.15
CPNE1-226ENST00000486021 RNF38Q9H0F5 515 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 LRRC4Q9HBW1 653 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 CYLDQ9NQC7 956 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 ARHGEF4Q9NR80 690 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 VPS45Q9NRW7 570 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 SEMA4GQ9NTN9 838 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 SMPD4Q9NXE4 827 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 CLIC5Q9NZA1 410 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 NAGPAQ9UK23 515 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 CIZ1Q9ULV3 898 aaPredicted RBP7.88□□□□□ -1.15
CPNE1-226ENST00000486021 COL4A3Q01955 1670 aa7.88□□□□□ -1.15
CPNE1-226ENST00000486021 F5P12259 2224 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 A0A0A0MRY4 1105 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 GFRA2O00451 464 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 PMM2O15305 246 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 HOXC11O43248 304 aaPredicted RBP7.87□□□□□ -1.15
CPNE1-226ENST00000486021 SART1O43290 800 aaKnown RBP7.87□□□□□ -1.15
CPNE1-226ENST00000486021 AP5Z1O43299 807 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 COCHO43405 550 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 MED7O43513 233 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 HCRTO43612 131 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 EPN2O95208 641 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 KAT7O95251 611 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 CYP17A1P05093 508 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 ZDHHC11BP0C7U3 371 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 PRR29P0C7W0 189 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 ZNF806P0C7X5 589 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 VDRP11473 427 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 RARGP13631 454 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 CCDC130P13994 396 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 RDXP35241 583 aaKnown RBP7.87□□□□□ -1.15
CPNE1-226ENST00000486021 PRCPP42785 496 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 HARS2P49590 506 aaKnown RBP7.87□□□□□ -1.15
CPNE1-226ENST00000486021 LIMK1P53667 647 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 MCCD1P59942 119 aaPredicted RBP7.87□□□□□ -1.15
CPNE1-226ENST00000486021 USP46P62068 366 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 BST2Q10589 180 aaKnown RBP7.87□□□□□ -1.15
CPNE1-226ENST00000486021 SFSWAPQ12872 951 aaKnown RBP7.87□□□□□ -1.15
CPNE1-226ENST00000486021 PNOCQ13519 176 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 CRY1Q16526 586 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 C10orf120Q5SQS8 335 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 DAB2IPQ5VWQ8 1189 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 GRAMD4Q6IC98 578 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 PRR23CQ6ZRP0 262 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 Q6ZS52 159 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 CLEC20AQ6ZU45 233 aa7.87□□□□□ -1.15
CPNE1-226ENST00000486021 CCDC186Q7Z3E2 898 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms