RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 PDCLQ13371 301 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 KLHDC10Q6PID8 442 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 VITQ6UXI7 678 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 TMEM110Q86TL2 294 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 NOP9Q86U38 636 aaKnown RBP11.38□□□□□ -0.59
ATG4B-219ENST00000479941 YAF2Q8IY57 180 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 BPIFB1Q8TDL5 484 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 EPS8L1Q8TE68 723 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 IRGQQ8WZA9 623 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 DDX1Q92499 740 aaKnown RBP11.38□□□□□ -0.59
ATG4B-219ENST00000479941 IRF7Q92985 503 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 USP13Q92995 863 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-219ENST00000479941 RSPRY1Q96DX4 576 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 TRMT61BQ9BVS5 477 aaKnown RBP11.38□□□□□ -0.59
ATG4B-219ENST00000479941 SLC4A5Q9BY07 1137 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 PLA2G2FQ9BZM2 168 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 ULBP1Q9BZM6 244 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 XPO4Q9C0E2 1151 aaKnown RBP11.38□□□□□ -0.59
ATG4B-219ENST00000479941 RNF38Q9H0F5 515 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 SMG9Q9H0W8 520 aaKnown RBP11.38□□□□□ -0.59
ATG4B-219ENST00000479941 CCSER2Q9H7U1 834 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 NMUR1Q9HB89 426 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 SLC2A4RGQ9NR83 387 aa11.38□□□□□ -0.59
ATG4B-219ENST00000479941 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.38□□□□□ -0.59
ATG4B-219ENST00000479941 NUP210Q8TEM1 1887 aaPredicted RBP11.38□□□□□ -0.59
ATG4B-219ENST00000479941 ANAPC1Q9H1A4 1944 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 CHADO15335 359 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 SART1O43290 800 aaKnown RBP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 COCHO43405 550 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 NARSO43776 548 aaKnown RBP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 TLR5O60602 858 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 MBL2P11226 248 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 RARGP13631 454 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 FERP16591 822 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 CDH5P33151 784 aaPredicted RBP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 ATP5C1P36542 298 aaKnown RBP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 PGFP49763 221 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 DAOAP59103 153 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 YWHAGP61981 247 aaKnown RBP eCLIP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 GPC5P78333 572 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 PFKPQ01813 784 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 CDR2Q01850 454 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 SIGLEC14Q08ET2 396 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 GRM2Q14416 872 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 ARHGAP29Q52LW3 1261 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 TAF3Q5VWG9 929 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 BTBD8Q5XKL5 378 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 SCD5Q86SK9 330 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 DDX42Q86XP3 938 aaKnown RBP eCLIP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 GPIHBP1Q8IV16 184 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 PASD1Q8IV76 773 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 WDTC1Q8N5D0 677 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 KIAA1958Q8N8K9 716 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 TMEM35BQ8NCS4 154 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 C1orf131Q8NDD1 294 aaKnown RBP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 BAP1Q92560 729 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 GOLGA1Q92805 767 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 PPP1R13BQ96KQ4 1090 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 TTYH3Q9C0H2 523 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 NACA2Q9H009 215 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 BRD9Q9H8M2 597 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 ABCC13Q9NSE7 274 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 THG1LQ9NWX6 298 aaKnown RBP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 OSER1Q9NX31 292 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 CYTH4Q9UIA0 394 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 NOCTQ9UK39 431 aaKnown RBP11.37□□□□□ -0.59
ATG4B-219ENST00000479941 CCL26Q9Y258 94 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 CPQQ9Y646 472 aa11.37□□□□□ -0.59
ATG4B-219ENST00000479941 ITIH6Q6UXX5 1313 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 A0A1W2PQJ5 194 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 LRRC53A6NM62 1247 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 YJEFN3A6XGL0 299 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 E5RJQ4 531 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 E7ENQ6 273 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 ZNF263O14978 683 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 GABBR2O75899 941 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 LSM8O95777 96 aaKnown RBP11.36□□□□□ -0.59
ATG4B-219ENST00000479941 GDI1P31150 447 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 ARID5AQ03989 594 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 MTF1Q14872 753 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 ZNF77Q15935 545 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 CC2D1AQ6P1N0 951 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-219ENST00000479941 SARM1Q6SZW1 724 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 BHLHA9Q7RTU4 235 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 SCUBE3Q8IX30 993 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 ZNF397Q8NF99 534 aaPredicted RBP11.36□□□□□ -0.59
ATG4B-219ENST00000479941 SH3RF2Q8TEC5 729 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 IPO4Q8TEX9 1081 aaKnown RBP11.36□□□□□ -0.59
ATG4B-219ENST00000479941 DNASE1L2Q92874 299 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 LRRC3BQ96PB8 259 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 TRIM62Q9BVG3 475 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 MIS12Q9H081 205 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 NUCKS1Q9H1E3 243 aaKnown RBP11.36□□□□□ -0.59
ATG4B-219ENST00000479941 TRPV5Q9NQA5 729 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 OLA1Q9NTK5 396 aaKnown RBP11.36□□□□□ -0.59
ATG4B-219ENST00000479941 WNT16Q9UBV4 365 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 DNMT3LQ9UJW3 386 aa11.36□□□□□ -0.59
ATG4B-219ENST00000479941 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.36□□□□□ -0.594e-11■■■□□ 15.7
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms