RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 P2RY13Q9BPV8 354 aa16.27■□□□□ 0.2
FDPS-208ENST00000470171 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.27■□□□□ 0.24e-8■■■■■ 107.6
FDPS-208ENST00000470171 PRMT8Q9NR22 394 aaPredicted RBP16.27■□□□□ 0.2
FDPS-208ENST00000470171 OLA1Q9NTK5 396 aaKnown RBP16.27■□□□□ 0.2
FDPS-208ENST00000470171 GMIPQ9P107 970 aa16.27■□□□□ 0.2
FDPS-208ENST00000470171 PCDHB4Q9Y5E5 795 aa16.27■□□□□ 0.2
FDPS-208ENST00000470171 LRRN2O75325 713 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 TPM2P07951 284 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 SP9P0CG40 484 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 EEF1GP26641 437 aaKnown RBP16.26■□□□□ 0.19
FDPS-208ENST00000470171 CNR2P34972 360 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 GJA4P35212 333 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
FDPS-208ENST00000470171 CXCL12P48061 93 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 TNK2Q07912 1038 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 EXOC3L4Q17RC7 722 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 RBM43Q6ZSC3 357 aaKnown RBP16.26■□□□□ 0.19
FDPS-208ENST00000470171 HTR3DQ70Z44 454 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 GPIHBP1Q8IV16 184 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 NKD2Q969F2 451 aaPredicted RBP16.26■□□□□ 0.19
FDPS-208ENST00000470171 TRIM62Q9BVG3 475 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 DCLK3Q9C098 648 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 INTS2Q9H0H0 1204 aaKnown RBP16.26■□□□□ 0.19
FDPS-208ENST00000470171 LRRC4Q9HBW1 653 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 CNGB3Q9NQW8 809 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.26■□□□□ 0.19
FDPS-208ENST00000470171 ZSCAN32Q9NX65 697 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 CFAP97Q9P2B7 532 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 TSPAN16Q9UKR8 245 aa16.26■□□□□ 0.19
FDPS-208ENST00000470171 CHURC1-FNTBB4DL54 471 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 O00370 1275 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 SART1O43290 800 aaKnown RBP16.25■□□□□ 0.19
FDPS-208ENST00000470171 ZBED1O96006 694 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 GAD2Q05329 585 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 LRMPQ12912 555 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 MTAPQ13126 283 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 E2F5Q15329 346 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 HSF5Q4G112 596 aaPredicted RBP16.25■□□□□ 0.19
FDPS-208ENST00000470171 PIGZQ86VD9 579 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 ENOX1Q8TC92 643 aaKnown RBP16.25■□□□□ 0.19
FDPS-208ENST00000470171 KCNV2Q8TDN2 545 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 STK32AQ8WU08 396 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 ATRIPQ8WXE1 791 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 IRGQQ8WZA9 623 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 NELL1Q92832 810 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 CD101Q93033 1021 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 NAGPAQ9UK23 515 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 STRIP2Q9ULQ0 834 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 DAAM1Q9Y4D1 1078 aa16.25■□□□□ 0.19
FDPS-208ENST00000470171 CCDC163A0A0D9SF12 145 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 FBXO21O94952 628 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 RARGP13631 454 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 MRE11P49959 708 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 TKTL1P51854 596 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 ZNF132P52740 706 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 SNX16P57768 344 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 PON2Q15165 354 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 GOLGA7BQ2TAP0 167 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 BTBD8Q5XKL5 378 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 TRIM68Q6AZZ1 485 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 TRIM65Q6PJ69 517 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 SASS6Q6UVJ0 657 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 SIX6OS1Q8N1H7 587 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 GOLGA1Q92805 767 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 ACDQ96AP0 544 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 KLF16Q9BXK1 252 aaPredicted RBP16.24■□□□□ 0.19
FDPS-208ENST00000470171 IRX2Q9BZI1 471 aaPredicted RBP16.24■□□□□ 0.19
FDPS-208ENST00000470171 CCSER2Q9H7U1 834 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 UBE2TQ9NPD8 197 aaPredicted RBP16.24■□□□□ 0.19
FDPS-208ENST00000470171 ANO10Q9NW15 660 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 TMEM51Q9NW97 253 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 WDR35Q9P2L0 1181 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 APEX2Q9UBZ4 518 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.24■□□□□ 0.19
FDPS-208ENST00000470171 WNT6Q9Y6F9 365 aa16.24■□□□□ 0.19
FDPS-208ENST00000470171 A0A0A0MRY4 1105 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 ARSAP15289 507 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 CHKAP35790 457 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 ACADSBP45954 432 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 GALK1P51570 392 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 BPIFB4P59827 614 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 ZNF445P59923 1031 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 CSTF1Q05048 431 aaKnown RBP16.23■□□□□ 0.19
FDPS-208ENST00000470171 PDE4CQ08493 712 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 DHCR24Q15392 516 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 DPCR1Q3MIW9 517 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 VWA3BQ502W6 1294 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 PKDCCQ504Y2 493 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 C10orf120Q5SQS8 335 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 TXNDC11Q6PKC3 985 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 TTC30AQ86WT1 665 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 IRF2BP1Q8IU81 584 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 CAMKK1Q8N5S9 505 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 RBBP8NLQ8NC74 664 aaPredicted RBP16.23■□□□□ 0.19
FDPS-208ENST00000470171 ZBTB44Q8NCP5 570 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 ANKRD20A12PQ8NF67 263 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 SLC35F5Q8WV83 523 aa16.23■□□□□ 0.19
FDPS-208ENST00000470171 ZFRQ96KR1 1074 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms