RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 NPNTQ6UXI9 565 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 ABRAQ8N0Z2 381 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 GLIS1Q8NBF1 620 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 RUBCNQ92622 972 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 ACAP3Q96P50 834 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 CGRRF1Q99675 332 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 CNOT10Q9H9A5 744 aaKnown RBP12.83□□□□□ -0.35
USP11-206ENST00000469080 GDF3Q9NR23 364 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 STOML1Q9UBI4 398 aa12.83□□□□□ -0.35
USP11-206ENST00000469080 C4BPAP04003 597 aaKnown RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 CYP1A1P04798 512 aaPredicted RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 IQCF3P0C7M6 154 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 CYP2C9P11712 490 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 PDGFRAP16234 1089 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 SH3BGRP55822 239 aaPredicted RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 CACNB2Q08289 660 aaPredicted RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 PDE1CQ14123 709 aaPredicted RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 PSMD6Q15008 389 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 RHOT1Q8IXI2 618 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 C2orf69Q8N8R5 385 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 SLC43A3Q8NBI5 491 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 FEZF2Q8TBJ5 459 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 ADAM32Q8TC27 787 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 DTX3LQ8TDB6 740 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 PPP1R14BQ96C90 147 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 MFSD14AQ96MC6 490 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 TWNKQ96RR1 684 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 GINM1Q9NU53 330 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 USP15Q9Y4E8 981 aaPredicted RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 PPEF2O14830 753 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 CD48P09326 243 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 ARF4P18085 180 aaPredicted RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 MUTP22033 750 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 VHLP40337 213 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 CD97P48960 835 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 TRPC1P48995 793 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.36
USP11-206ENST00000469080 NME3Q13232 169 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 TMEM132DQ14C87 1099 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 CCL14Q16627 93 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 SNX30Q5VWJ9 437 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 DARS2Q6PI48 645 aaKnown RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 MPZL3Q6UWV2 235 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 ACO2Q99798 780 aaKnown RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 CDHR5Q9HBB8 845 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 HESX1Q9UBX0 185 aa12.83□□□□□ -0.36
USP11-206ENST00000469080 MAFBQ9Y5Q3 323 aaPredicted RBP12.83□□□□□ -0.36
USP11-206ENST00000469080 HBP1O60381 514 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 GJA5P36382 358 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 TMC3Q7Z5M5 1100 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 PIGWQ7Z7B1 504 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 NME8Q8N427 588 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 FAM167AQ96KS9 214 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 TMEM237Q96Q45 408 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 SLITRK6Q9H5Y7 841 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 FGFR1OP2Q9NVK5 253 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 PGK1P00558 417 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 CHRNA3P32297 505 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 EFNA5P52803 228 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 NDST1P52848 882 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 PTENP60484 403 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 BNIP1Q12981 228 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 CYLC2Q14093 348 aaPredicted RBP12.82□□□□□ -0.36
USP11-206ENST00000469080 INAQ16352 499 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 LRIG3Q6UXM1 1119 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 CTU1Q7Z7A3 348 aaKnown RBP12.82□□□□□ -0.36
USP11-206ENST00000469080 FAM71DQ8N9W8 422 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 CCNYQ8ND76 341 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 RNF34Q969K3 372 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 ZNF333Q96JL9 665 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 PHF12Q96QT6 1004 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 SH3GL1Q99961 368 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 SENP7Q9BQF6 1050 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 EIF2AQ9BY44 585 aaKnown RBP12.82□□□□□ -0.36
USP11-206ENST00000469080 PARVAQ9NVD7 372 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 DOLKQ9UPQ8 538 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 E7ENQ6 273 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 SLC26A4O43511 780 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 LYPLA2O95372 231 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 GH1P01241 217 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 PAEPP09466 180 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 MAMLD1Q13495 774 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 XRRA1Q6P2D8 792 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 KDELC2Q7Z4H8 507 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 ARHGEF2Q92974 986 aaKnown RBP12.82□□□□□ -0.36
USP11-206ENST00000469080 HSPBAP1Q96EW2 488 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 SNX27Q96L92 541 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 VPS33BQ9H267 617 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 C12orf65Q9H3J6 166 aaKnown RBP12.82□□□□□ -0.36
USP11-206ENST00000469080 EURLQ9NYK6 297 aa12.82□□□□□ -0.36
USP11-206ENST00000469080 MROH7Q68CQ1 1323 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 MAFO75444 373 aaPredicted RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 ASMTLO95671 621 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 SAT1P21673 171 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 HSPA9P38646 679 aaKnown RBP12.81□□□□□ -0.36
USP11-206ENST00000469080 ARPP19P56211 112 aa12.81□□□□□ -0.36
USP11-206ENST00000469080 PDE1BQ01064 536 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms