RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 NYXQ9GZU5 481 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 VPS16Q9H269 839 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 ADNPQ9H2P0 1102 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 FANCEQ9HB96 536 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 PARVBQ9HBI1 364 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 PDE11AQ9HCR9 933 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 TM9SF3Q9HD45 589 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 DDX4Q9NQI0 724 aaKnown RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 PLSCR4Q9NRQ2 329 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 ATAD3AQ9NVI7 634 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 C19orf53Q9UNZ5 99 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 EXOC7Q9UPT5 735 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 EXOC6BQ9Y2D4 811 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 MSRB2Q9Y3D2 182 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 SLC4A7Q9Y6M7 1214 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZMYM4Q5VZL5 1548 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CCDC7Q96M83 1385 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 FER1L4A9Z1Z3 1794 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 KIAA0556O60303 1618 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 ATP10AO60312 1499 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ATP10BO94823 1461 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 PTPRKQ15262 1439 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 PPIP5K1Q6PFW1 1433 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 LOC100653049A0A140TA62 436 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 MROH6A6NGR9 719 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SLC9B1P1A6NJY1 282 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ACOD1A6NK06 481 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 OVOL3O00110 214 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 NIPSNAP2O75323 286 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 KRT34O76011 436 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ENDOD1O94919 500 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ABLIM3O94929 683 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 KRT14P02533 472 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 FUCA1P04066 466 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 S100A9P06702 114 aaKnown RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ASGR1P07306 291 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CYP2A6P11509 494 aaPredicted RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CTRB1P17538 263 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CDH3P22223 829 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CFL1P23528 166 aaKnown RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ATP5F1P24539 256 aaPredicted RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 EEF1GP26641 437 aaKnown RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 PTGS2P35354 604 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ACVRL1P37023 503 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ALDH3A2P51648 485 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 THOP1P52888 689 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 POLR2GP62487 172 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CDC16Q13042 620 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CUL2Q13617 745 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 BYSLQ13895 437 aaKnown RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 NDUFA5Q16718 116 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 IGSF11Q5DX21 431 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 XKR9Q5GH70 373 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM209AQ5JX71 171 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM26FQ5R3K3 315 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SNX30Q5VWJ9 437 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 FBXW10Q5XX13 1052 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 MBLAC2Q68D91 279 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CTRB2Q6GPI1 263 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 RAB12Q6IQ22 244 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CCDC121Q6ZUS5 278 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 GALNT7Q86SF2 657 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ERO1BQ86YB8 467 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 PALM2Q8IXS6 379 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM186BQ8IYM0 893 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SYCP3Q8IZU3 236 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CNTROBQ8N137 903 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ARHGEF39Q8N4T4 335 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 TXNDC5Q8NBS9 432 aaKnown RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZNF397Q8NF99 534 aaPredicted RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 RFWD2Q8NHY2 731 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 CDC26Q8NHZ8 85 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 RASGRP4Q8TDF6 673 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SH3RF3Q8TEJ3 882 aaPredicted RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 RAPGEF5Q92565 580 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZNF653Q96CK0 615 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 GPRASP2Q96D09 838 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SPATA17Q96L03 361 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 WDR24Q96S15 920 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 PIGSQ96S52 555 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SMC6Q96SB8 1091 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 MNTQ99583 582 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SLC26A6Q9BXS9 759 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 DCTPP1Q9H773 170 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZNF277Q9NRM2 450 aaPredicted RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SPTLC3Q9NUV7 552 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 NSMCE4AQ9NXX6 385 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 DACT1Q9NYF0 836 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 KIF17Q9P2E2 1029 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 HMGXB4Q9UGU5 601 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 ANAPC5Q9UJX4 755 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 BAG5Q9UL15 447 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 R3HDM2Q9Y2K5 976 aaKnown RBP5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SH3GLB1Q9Y371 365 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 PCDHB6Q9Y5E3 794 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 BACE2Q9Y5Z0 518 aa5□□□□□ -1.61
HMGB3P9-201ENST00000441799 SESN1Q9Y6P5 492 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms