RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GOLGA7BQ2TAP0 167 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 MAMSTRQ6ZN01 415 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 RRAGAQ7L523 313 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 GPRIN1Q7Z2K8 1008 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 FAM114A1Q8IWE2 563 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 SPEM1Q8N4L4 309 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 CD101Q93033 1021 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 UBXN6Q9BZV1 441 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 SEMA4AQ9H3S1 761 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 RBM12Q9NTZ6 932 aaKnown RBP11.81□□□□□ -0.52
RFFL-204ENST00000414419 NAGPAQ9UK23 515 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 TSPAN16Q9UKR8 245 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 R4GN57 208 aa11.81□□□□□ -0.52
RFFL-204ENST00000414419 A0A1W2PQH9 124 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 E2F8A0AVK6 867 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 ATG13O75143 517 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 PAEPP09466 180 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 IRF1P10914 325 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 RARGP13631 454 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 GALK1P51570 392 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 GCNT1Q02742 428 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 BST2Q10589 180 aaKnown RBP11.8□□□□□ -0.52
RFFL-204ENST00000414419 CCINQ13939 588 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 TMEM196Q5HYL7 178 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 C10orf120Q5SQS8 335 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 CCDC186Q7Z3E2 898 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 PIGZQ86VD9 579 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 MAML2Q8IZL2 1156 aaPredicted RBP11.8□□□□□ -0.52
RFFL-204ENST00000414419 ADGRG2Q8IZP9 1017 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 ARHGAP18Q8N392 663 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 LMO3Q8TAP4 145 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 OTUB2Q96DC9 234 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 FAM81BQ96LP2 452 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 CDK5RAP1Q96SZ6 601 aaKnown RBP11.8□□□□□ -0.52
RFFL-204ENST00000414419 FAM126AQ9BYI3 521 aaPredicted RBP11.8□□□□□ -0.52
RFFL-204ENST00000414419 INTS2Q9H0H0 1204 aaKnown RBP11.8□□□□□ -0.52
RFFL-204ENST00000414419 LRRC4Q9HBW1 653 aa11.8□□□□□ -0.52
RFFL-204ENST00000414419 LSM7Q9UK45 103 aaKnown RBP11.8□□□□□ -0.52
RFFL-204ENST00000414419 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
RFFL-204ENST00000414419 PTPRZ1P23471 2315 aaPredicted RBP11.8□□□□□ -0.52
RFFL-204ENST00000414419 SCAMP3O14828 347 aaKnown RBP11.79□□□□□ -0.52
RFFL-204ENST00000414419 XPO1O14980 1071 aaKnown RBP11.79□□□□□ -0.52
RFFL-204ENST00000414419 TBX18O95935 607 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 ADH1CP00326 375 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 KRT5P13647 590 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 ERCC5P28715 1186 aaPredicted RBP11.79□□□□□ -0.52
RFFL-204ENST00000414419 PLA2G4AP47712 749 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 TKTL1P51854 596 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 PDE4CQ08493 712 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 DHCR24Q15392 516 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 STILQ15468 1287 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 DPCR1Q3MIW9 517 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 FBXO43Q4G163 708 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 FSTL4Q6MZW2 842 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 TSSK4Q6SA08 328 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 GBP6Q6ZN66 633 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 Q6ZS52 159 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 RSRC2Q7L4I2 434 aaKnown RBP11.79□□□□□ -0.52
RFFL-204ENST00000414419 ARHGEF19Q8IW93 802 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 UBR7Q8N806 425 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 RBBP8NLQ8NC74 664 aaPredicted RBP11.79□□□□□ -0.52
RFFL-204ENST00000414419 CCDC26Q8TAB7 109 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 UBA3Q8TBC4 463 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 CHFRQ96EP1 664 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 UBE2TQ9NPD8 197 aaPredicted RBP11.79□□□□□ -0.52
RFFL-204ENST00000414419 CYLDQ9NQC7 956 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 PRMT8Q9NR22 394 aaPredicted RBP11.79□□□□□ -0.52
RFFL-204ENST00000414419 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
RFFL-204ENST00000414419 ZSCAN32Q9NX65 697 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 CLIC5Q9NZA1 410 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 DNMT3LQ9UJW3 386 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 PCDHGA2Q9Y5H1 932 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 USP3Q9Y6I4 520 aa11.79□□□□□ -0.52
RFFL-204ENST00000414419 RIF1Q5UIP0 2472 aaKnown RBP11.79□□□□□ -0.52
RFFL-204ENST00000414419 PRR23AA6NEV1 266 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 ZBED1O96006 694 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 EGFP01133 1207 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 LMNAP02545 664 aaKnown RBP11.78□□□□□ -0.52
RFFL-204ENST00000414419 CYP17A1P05093 508 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 SETSIPP0DME0 302 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 PGFP49763 221 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 MFAP3P55082 362 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 SATB1Q01826 763 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 GAD2Q05329 585 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 CNGA2Q16280 664 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 CT47A1Q5JQC4 288 aaPredicted RBP11.78□□□□□ -0.52
RFFL-204ENST00000414419 BTBD8Q5XKL5 378 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 KLHDC10Q6PID8 442 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 LCLAT1Q6UWP7 414 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 ENOSF1Q7L5Y1 443 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 TTC30AQ86WT1 665 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 SIX6OS1Q8N1H7 587 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 KAT5Q92993 513 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 ZFRQ96KR1 1074 aaKnown RBP11.78□□□□□ -0.52
RFFL-204ENST00000414419 CRACR2AQ9BSW2 395 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
RFFL-204ENST00000414419 NMUR1Q9HB89 426 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 OSER1Q9NX31 292 aa11.78□□□□□ -0.52
RFFL-204ENST00000414419 NUDT5Q9UKK9 219 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms