RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 AKAP17AQ02040 695 aaKnown RBP5.37□□□□□ -1.55
GABPB1-204ENST00000396464 SCAPQ12770 1279 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 COASYQ13057 564 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 NOMO1Q15155 1222 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 MEX3CQ5U5Q3 659 aaKnown RBP5.37□□□□□ -1.55
GABPB1-204ENST00000396464 PRAMEF18Q5VWM3 479 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 PRAMEF9Q5VWM5 478 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 KIAA1841Q6NSI8 718 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 TAF2Q6P1X5 1199 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 MTFR2Q6P444 385 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 C11orf88Q6PI97 169 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 GPR149Q86SP6 731 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 NLGN4XQ8N0W4 816 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 SCML4Q8N228 414 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 OR6B3Q8NGW1 331 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 DENND1AQ8TEH3 1009 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 VPS33AQ96AX1 596 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 FOXRED1Q96CU9 486 aaPredicted RBP5.37□□□□□ -1.55
GABPB1-204ENST00000396464 SNX27Q96L92 541 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 MRGPRX4Q96LA9 322 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 TUBGCP5Q96RT8 1024 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 RBM15Q96T37 977 aaKnown RBP eCLIP5.37□□□□□ -1.557e-13■■■■■ 35
GABPB1-204ENST00000396464 TEX13BQ9BXU2 312 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 NOD2Q9HC29 1040 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 FANCFQ9NPI8 374 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 TDP1Q9NUW8 608 aa5.37□□□□□ -1.55
GABPB1-204ENST00000396464 ARHGAP10A1A4S6 786 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 FAM171A2A8MVW0 826 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 A8MXE2 369 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 TAF4O00268 1085 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 KRT38O76015 456 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 PCDH8O95206 1070 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 FSHBP01225 129 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 CYP1A1P04798 512 aaPredicted RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 ZNF20P17024 532 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 EGR1P18146 543 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 TNFRSF1AP19438 455 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 PSMA4P25789 261 aaKnown RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 MAPK3P27361 379 aaPredicted RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 AKT1P31749 480 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 PRPHP41219 470 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 SESN2P58004 480 aaPredicted RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 YBEYP58557 167 aaPredicted RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 RPS3AP61247 264 aaKnown RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 KLHL30Q0D2K2 578 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 MRPL28Q13084 256 aaKnown RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 TARDBPQ13148 414 aaKnown RBP eCLIP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 SLC13A2Q13183 592 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 NFE2L1Q14494 772 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 ANKRD1Q15327 319 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 TTC38Q5R3I4 469 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 TMTC4Q5T4D3 741 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 FAM69AQ5T7M9 428 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 C16orf87Q6PH81 154 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 KDELC1Q6UW63 502 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 IKBIPQ70UQ0 350 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 ZER1Q7Z7L7 766 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 STK32CQ86UX6 486 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 NBPF5PQ86XG9 351 aaPredicted RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 CCDC150Q8NCX0 1101 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 UHMK1Q8TAS1 419 aaKnown RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 PLEKHO2Q8TD55 490 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 GRK7Q8WTQ7 553 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 CFHR4Q92496 578 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 APOPT1Q96IL0 206 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 LCORQ96JN0 433 aaPredicted RBP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 RUNDC3BQ96NL0 473 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 FTOQ9C0B1 505 aaKnown RBP eCLIP5.36□□□□□ -1.55
GABPB1-204ENST00000396464 SLC25A18Q9H1K4 315 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 MUC13Q9H3R2 512 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 CHODLQ9H9P2 273 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 G6PC2Q9NQR9 355 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 DNAJC16Q9Y2G8 782 aa5.36□□□□□ -1.55
GABPB1-204ENST00000396464 ATAD2BQ9ULI0 1458 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 A0A0U1RQK1 487 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 ZNF320A2RRD8 509 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 VWA3AA6NCI4 1184 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 PRAMEF25A6NGN4 478 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 FAM90A27PA6NNH2 459 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 H0YAE9 185 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 BTN3A1O00481 513 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 TXNL1O43396 289 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 AKAP8O43823 692 aaKnown RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 SYNCRIPO60506 623 aaKnown RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 PIAS2O75928 621 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 AHSGP02765 367 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 C4BPAP04003 597 aaKnown RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 MMEP08473 750 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 TFEBP19484 476 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 MALP21145 153 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 IL4RP24394 825 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 TBXAS1P24557 533 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 EPHA8P29322 1005 aaPredicted RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 GCH1P30793 250 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 KRT2P35908 639 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 PSMC2P35998 433 aaKnown RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 PSMB10P40306 273 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 HARS2P49590 506 aaKnown RBP5.35□□□□□ -1.55
GABPB1-204ENST00000396464 BCAT1P54687 386 aa5.35□□□□□ -1.55
GABPB1-204ENST00000396464 MLLT6P55198 1093 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms