RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 ZWINTO95229 277 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 CST3P01034 146 aaPredicted RBP9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 GHRP10912 638 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 CREB1P16220 341 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 TAC1P20366 129 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 TAF6P49848 677 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 ALDH5A1P51649 535 aaPredicted RBP9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 TAP1Q03518 808 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 ADIGQ0VDE8 80 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 RCN1Q15293 331 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 NOTUMQ6P988 496 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 B3GNT5Q9BYG0 378 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 FAM53CQ9NYF3 392 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 MYO7AQ13402 2215 aa9.44□□□□□ -0.9
SMARCA1-202ENST00000371122 EME2A4GXA9 379 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 MEI4A8MW99 385 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 A8MX80 341 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 HMGCRP04035 888 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 PAMP19021 973 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 SP100P23497 879 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 DNAJB2P25686 324 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 FAAP100Q0VG06 881 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 FSTL1Q12841 308 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 BOLA3Q53S33 107 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 C10orf120Q5SQS8 335 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 CHSY1Q86X52 802 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 ERO1BQ86YB8 467 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 FAM129AQ9BZQ8 928 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 UPF3AQ9H1J1 476 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 GOLGA2P5Q9HBQ8 144 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 IARS2Q9NSE4 1012 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 SPATS2LQ9NUQ6 558 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.43□□□□□ -0.99e-9■■■□□ 15.7
SMARCA1-202ENST00000371122 ANP32DO95626 131 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 WEE1P30291 646 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 LAMC2Q13753 1193 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 EFTUD2Q15029 972 aaKnown RBP eCLIP9.43□□□□□ -0.91e-8■■■■■ 27.2
SMARCA1-202ENST00000371122 PHF21BQ96EK2 531 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 WNK4Q96J92 1243 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 RPRD1AQ96P16 312 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 SERPINB12Q96P63 405 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 VCX3AQ9NNX9 186 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 SMPD4Q9NXE4 827 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 CYP39A1Q9NYL5 469 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 WRAP73Q9P2S5 460 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 PNMA8BQ9ULN7 279 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 KIAA0391O15091 583 aaKnown RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 PJA2O43164 708 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 ZMPSTE24O75844 475 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 TFE3P19532 575 aaPredicted RBP9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 ADORA2AP29274 412 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 PTPN7P35236 360 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 HSP90AA5PQ58FG0 334 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 RAET1EQ8TD07 263 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 CAVIN3Q969G5 261 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 SERPINI1Q99574 410 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 ARHGEF38Q9NXL2 777 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 ARHGAP26Q9UNA1 814 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 DNAJC16Q9Y2G8 782 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 PCDHA3Q9Y5H8 950 aa9.43□□□□□ -0.9
SMARCA1-202ENST00000371122 TNRC6CQ9HCJ0 1690 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 ASAP2O43150 1006 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 ZC3H11AO75152 810 aaKnown RBP eCLIP9.42□□□□□ -0.94e-6■□□□□ 9.3
SMARCA1-202ENST00000371122 SUPT7LO94864 414 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 POLBP06746 335 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 TKTL1P51854 596 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 PHEXP78562 749 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 ITGA9Q13797 1035 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 CCNG2Q16589 344 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 QPCTQ16769 361 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 ZC3H12AQ5D1E8 599 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 FSCBQ5H9T9 825 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 SPDYAQ5MJ70 313 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 ITPRIPL1Q6GPH6 555 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 APTXQ7Z2E3 356 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 REPS2Q8NFH8 660 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 TFB1MQ8WVM0 346 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 SPOCK2Q92563 424 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 MKL1Q969V6 931 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 GAD1Q99259 594 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 EFHD1Q9BUP0 239 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 APOL5Q9BWW9 433 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 ROPN1BQ9BZX4 212 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 C17orf75Q9HAS0 396 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 ROPN1Q9HAT0 212 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 CACNG4Q9UBN1 327 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 COG5Q9UP83 839 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 COL11A2P13942 1736 aaPredicted RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 GTPBP10A4D1E9 387 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 TULP2O00295 520 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 MICAL2O94851 1124 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 CHEK2O96017 543 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 CYP2F1P24903 491 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 CENPCQ03188 943 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 EFEMP1Q12805 493 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 RRP1BQ14684 758 aaKnown RBP9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 IMPG1Q17R60 797 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 KBTBD12Q3ZCT8 623 aa9.42□□□□□ -0.9
SMARCA1-202ENST00000371122 TREML2Q5T2D2 321 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms