RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 MAPKAPK5Q8IW41 473 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 Q8NA96 180 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 SMCR8Q8TEV9 937 aaPredicted RBP6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 RBM15Q96T37 977 aaKnown RBP eCLIP6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 ISCA1Q9BUE6 129 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 MAGEH1Q9H213 219 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 DACT1Q9NYF0 836 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 TRPM5Q9NZQ8 1165 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 RNF181Q9P0P0 153 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 DNMT3BQ9UBC3 853 aaKnown RBP6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 DKK4Q9UBT3 224 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 NEU2Q9Y3R4 380 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 CDY1Q9Y6F8 540 aa6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 BRD4O60885 1362 aaPredicted RBP6.56□□□□□ -1.36
RNU4-39P-201ENST00000362455 GRXCR1A8MXD5 290 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 hCG_1984214I3L0E3 225 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 SYT5O00445 386 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 ACKR2O00590 384 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 PIP5K1BO14986 540 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 TRIM24O15164 1050 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 SOAT2O75908 522 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 SCAF4O95104 1147 aaKnown RBP6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 IDEP14735 1019 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 ITGALP20701 1170 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 LRPAP1P30533 357 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 SERPINF1P36955 418 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 ANXA11P50995 505 aaKnown RBP6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 RRP1BQ14684 758 aaKnown RBP6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 KCNAB1Q14722 419 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 ICAM4Q14773 271 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 ARHGAP15Q53QZ3 475 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 USP17L6PQ6QN14 398 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 LRRC55Q6ZSA7 311 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 KIAA0408Q6ZU52 694 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 FAM71BQ8TC56 605 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 BPIFB1Q8TDL5 484 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 WWC2-AS2Q96NR7 200 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 SLC46A2Q9BY10 475 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 PCDHAC1Q9H158 963 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 JAG2Q9Y219 1238 aa6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 MRPS17Q9Y2R5 130 aaKnown RBP6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 MTO1Q9Y2Z2 717 aaKnown RBP6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 CPSF1Q10570 1443 aaKnown RBP6.55□□□□□ -1.36
RNU4-39P-201ENST00000362455 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 AQP7P3A6NL99 342 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 AHRRA9YTQ3 701 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 E7ENX8 843 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 TRIM38O00635 465 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 PIAS2O75928 621 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 ZFPL1O95159 310 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 RASAL1O95294 804 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 ITGB3P05106 788 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 VEGFAP15692 232 aaPredicted RBP6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 EGR1P18146 543 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 DGKEP52429 567 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 TAP2Q03519 686 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 MYO1EQ12965 1108 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 PTK2BQ14289 1009 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 ZNF750Q32MQ0 723 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 HS1BP3Q53T59 392 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 B3GNTL1Q67FW5 361 aaPredicted RBP6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 RAP1GAP2Q684P5 730 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 CLNKQ7Z7G1 428 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 CPT1CQ8TCG5 803 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 STYXQ8WUJ0 223 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 TRAPPC12Q8WVT3 735 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 EDAQ92838 391 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 ADOQ96SZ5 270 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 TMEM120AQ9BXJ8 343 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 KCNE5Q9UJ90 142 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 ZMYND8Q9ULU4 1186 aaPredicted RBP6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 GPR52Q9Y2T5 361 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 FPGT-TNNI3KV9GXZ4 949 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 TOPAZ1Q8N9V7 1692 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 CASZ1Q86V15 1759 aa6.54□□□□□ -1.36
RNU4-39P-201ENST00000362455 ARHGEF28Q8N1W1 1705 aaKnown RBP6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 GOLGB1Q14789 3259 aaKnown RBP6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 PRAMEF33A0A0G2JMD5 474 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 A0A1W2PS29 197 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 PRAMEF10O60809 474 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 RECQL4O94761 1208 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 TNFRSF6BO95407 300 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 CFIP05156 583 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 KCNA3P22001 575 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 ATICP31939 592 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 CCT5P48643 541 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 NDUFV1P49821 464 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 DYRK1AQ13627 763 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 MAPKAPK3Q16644 382 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 CD300EQ496F6 205 aaPredicted RBP6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 PREPLQ4J6C6 727 aaPredicted RBP6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 TMTC4Q5T4D3 741 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 ARL6IP4Q66PJ3 421 aaKnown RBP6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 CCDC28AQ8IWP9 274 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 TMEM132CQ8N3T6 1108 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 TRIM63Q969Q1 353 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 TBC1D20Q96BZ9 403 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 NELL2Q99435 816 aa6.53□□□□□ -1.36
RNU4-39P-201ENST00000362455 PAGR1Q9BTK6 254 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms