RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SMG5Q9UPR3 1016 aaKnown RBP8.92□□□□□ -0.98
TDP1-201ENST00000335725 MYRFQ9Y2G1 1151 aa8.92□□□□□ -0.98
TDP1-201ENST00000335725 VWDEQ8N2E2 1590 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 BTNL10A8MVZ5 291 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 OR7A10O76100 309 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 ITGA6P23229 1130 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 SLC1A4P43007 532 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 PTENP60484 403 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 TBCCQ15814 346 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 NFIL3Q16649 462 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 TDRD12Q587J7 1177 aaKnown RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 UBE2UQ5VVX9 321 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 SETD3Q86TU7 594 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 ZNF589Q86UQ0 364 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 NCOA7Q8NI08 942 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 FBXO25Q8TCJ0 367 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 FRMD8Q9BZ67 464 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 PITHD1Q9GZP4 211 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 C8orf33Q9H7E9 229 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 CPNE5Q9HCH3 593 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 DNAJC17Q9NVM6 304 aaKnown RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 SIRT5Q9NXA8 310 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 VPS54Q9P1Q0 977 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 ZNF175Q9Y473 711 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 MLH3Q9UHC1 1453 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 UNC13BO14795 1591 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 C1orf232A0A0U1RR37 186 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 CAPN8A6NHC0 703 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 CDH16O75309 829 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 TCEA3O75764 348 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 H6PDO95479 791 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 ABCG1P45844 678 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 ZNF200P98182 395 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 CDK16Q00536 496 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 TARDBPQ13148 414 aaKnown RBP eCLIP8.91□□□□□ -0.98
TDP1-201ENST00000335725 AARS2Q5JTZ9 985 aaKnown RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 RABGAP1LQ5R372 815 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 ERAP2Q6P179 960 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 UNC5AQ6ZN44 842 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 SYCE1Q8N0S2 351 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 PSD4Q8NDX1 1056 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 TGFBRAP1Q8WUH2 860 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 ZNF496Q96IT1 587 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 TBCBQ99426 244 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 MYD88Q99836 296 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 TRIM51Q9BSJ1 452 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 MKNK1Q9BUB5 465 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 NPHS2Q9NP85 383 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 FAM8A1Q9UBU6 413 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 ADAMTS6Q9UKP5 1117 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 INPP5FQ9Y2H2 1132 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 PCDH11YQ9BZA8 1340 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 CLDN25C9JDP6 229 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 I3L4J1 428 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 PSMA7O14818 248 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 PI15O43692 258 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 DEAF1O75398 565 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 IDH1O75874 414 aaKnown RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 AXLP30530 894 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 POLR2BP30876 1174 aaKnown RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 GALK2Q01415 458 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 RSBN1Q5VWQ0 802 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 CYP20A1Q6UW02 462 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 SPATA2LQ8IUW3 424 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 RTKN2Q8IZC4 609 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 DEPDC4Q8N2C3 294 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 ARRDC4Q8NCT1 418 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 JPH3Q8WXH2 748 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 MOGAT1Q96PD6 335 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.91□□□□□ -0.98
TDP1-201ENST00000335725 ZKSCAN3Q9BRR0 538 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 C1QTNF7Q9BXJ2 289 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 CELF4Q9BZC1 486 aaKnown RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 C1orf21Q9H246 121 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 TIGARQ9NQ88 270 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 SEC31BQ9NQW1 1179 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 SFMBT1Q9UHJ3 866 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 LGALS13Q9UHV8 139 aa8.91□□□□□ -0.98
TDP1-201ENST00000335725 PACSIN2Q9UNF0 486 aaPredicted RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 EIF3LQ9Y262 564 aaKnown RBP8.91□□□□□ -0.98
TDP1-201ENST00000335725 A0A087WXM4 84 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 MAFO75444 373 aaPredicted RBP8.9□□□□□ -0.98
TDP1-201ENST00000335725 FGFR4P22455 802 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 HCAR3P49019 387 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 MPP2Q14168 576 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 CDK10Q15131 360 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 EPHA10Q5JZY3 1008 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 C6orf132Q5T0Z8 1188 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 BNC2Q6ZN30 1099 aaPredicted RBP8.9□□□□□ -0.98
TDP1-201ENST00000335725 CDH26Q8IXH8 852 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 PYDC1Q8WXC3 89 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 S100ZQ8WXG8 99 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
TDP1-201ENST00000335725 KIF20BQ96Q89 1820 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 NUDT12Q9BQG2 462 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 WACQ9BTA9 647 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 METTL22Q9BUU2 404 aaPredicted RBP8.9□□□□□ -0.98
TDP1-201ENST00000335725 TMEM168Q9H0V1 697 aa8.9□□□□□ -0.98
TDP1-201ENST00000335725 NARFLQ9H6Q4 476 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms