RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 PSEN1P49768 467 aa29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 CCR3P51677 355 aa29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 BCAT1P54687 386 aa29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 GOLGA7BQ2TAP0 167 aa29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 DPCR1Q3MIW9 517 aa29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 RRAGAQ7L523 313 aa29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 PIGZQ86VD9 579 aa29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 SPEM1Q8N4L4 309 aa29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 NKD2Q969F2 451 aaPredicted RBP29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 P2RY13Q9BPV8 354 aa29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 INTS2Q9H0H0 1204 aaKnown RBP29.1■■■□□ 2.25
ATPAF1-201ENST00000329231 A0A1W2PQH9 124 aa29.09■■■□□ 2.25
ATPAF1-201ENST00000329231 ERCC5P28715 1186 aaPredicted RBP29.09■■■□□ 2.25
ATPAF1-201ENST00000329231 ATP5C1P36542 298 aaKnown RBP29.09■■■□□ 2.25
ATPAF1-201ENST00000329231 TTC30AQ86WT1 665 aa29.09■■■□□ 2.25
ATPAF1-201ENST00000329231 GPT2Q8TD30 523 aa29.09■■■□□ 2.25
ATPAF1-201ENST00000329231 KAT5Q92993 513 aa29.09■■■□□ 2.25
ATPAF1-201ENST00000329231 SEMA4AQ9H3S1 761 aa29.09■■■□□ 2.25
ATPAF1-201ENST00000329231 NAGPAQ9UK23 515 aa29.09■■■□□ 2.25
ATPAF1-201ENST00000329231 SH3BP1Q9Y3L3 701 aa29.09■■■□□ 2.25
ATPAF1-201ENST00000329231 GFRA3O60609 400 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 DRD1P21728 446 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 GALK1P51570 392 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 BST2Q10589 180 aaKnown RBP29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 GAS6Q14393 721 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 FSTL4Q6MZW2 842 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 TADA2BQ86TJ2 420 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 IRF2BP1Q8IU81 584 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 ARHGEF19Q8IW93 802 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 FAM114A1Q8IWE2 563 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 ADGRG2Q8IZP9 1017 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 THAP9Q9H5L6 903 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 NMUR1Q9HB89 426 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 OSER1Q9NX31 292 aa29.08■■■□□ 2.25
ATPAF1-201ENST00000329231 O00370 1275 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 XPO1O14980 1071 aaKnown RBP29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 RALAP11233 206 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 RARGP13631 454 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 MTIF2P46199 727 aaKnown RBP29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 CXCL12P48061 93 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 PDE4CQ08493 712 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 GOLGA8FQ08AF8 430 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 GOLGA8DPQ0D2H9 430 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 RAB41Q5JT25 222 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 KLHDC10Q6PID8 442 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 Q6ZS52 159 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 CD101Q93033 1021 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 OTUB2Q96DC9 234 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 FAM126AQ9BYI3 521 aaPredicted RBP29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 MTPAPQ9NVV4 582 aaKnown RBP eCLIP29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 R4GN57 208 aa29.07■■■□□ 2.24
ATPAF1-201ENST00000329231 SCAMP3O14828 347 aaKnown RBP29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 TBX18O95935 607 aa29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 CT47A1Q5JQC4 288 aaPredicted RBP29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 LCLAT1Q6UWP7 414 aa29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 ARHGAP18Q8N392 663 aa29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 ZNF276Q8N554 614 aa29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 RBBP8NLQ8NC74 664 aaPredicted RBP29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 CDK5RAP1Q96SZ6 601 aaKnown RBP29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 CLIC5Q9NZA1 410 aa29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 DNMT3LQ9UJW3 386 aa29.06■■■□□ 2.24
ATPAF1-201ENST00000329231 CYP17A1P05093 508 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 SETSIPP0DME0 302 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 TKTL1P51854 596 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 DHCR24Q15392 516 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 STILQ15468 1287 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 C10orf120Q5SQS8 335 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 TSSK4Q6SA08 328 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 SCD5Q86SK9 330 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 TFAP2BQ92481 460 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 FAM81BQ96LP2 452 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 KREMEN1Q96MU8 473 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 KLF16Q9BXK1 252 aaPredicted RBP29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 LRRC4Q9HBW1 653 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 UBE2TQ9NPD8 197 aaPredicted RBP29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 ZSCAN32Q9NX65 697 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 PCDHGA2Q9Y5H1 932 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 MYO16Q9Y6X6 1858 aa29.05■■■□□ 2.24
ATPAF1-201ENST00000329231 PRR23AA6NEV1 266 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 RNF225M0QZC1 329 aaPredicted RBP29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 MBD3O95983 291 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 ADH1CP00326 375 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 EGFP01133 1207 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 IRF1P10914 325 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 PLA2G4AP47712 749 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 NRLP54845 237 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 SATB1Q01826 763 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 CNGA2Q16280 664 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 FBXO43Q4G163 708 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 NAIF1Q69YI7 327 aaPredicted RBP29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 GBP6Q6ZN66 633 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 ENOSF1Q7L5Y1 443 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 UBA3Q8TBC4 463 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 ATRIPQ8WXE1 791 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 NELL1Q92832 810 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 CRACR2AQ9BSW2 395 aa29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 FBRSL1Q9HCM7 1045 aaKnown RBP29.04■■■□□ 2.24
ATPAF1-201ENST00000329231 GTPBP10A4D1E9 387 aaKnown RBP29.03■■■□□ 2.24
ATPAF1-201ENST00000329231 TULP2O00295 520 aa29.03■■■□□ 2.24
ATPAF1-201ENST00000329231 ZBED1O96006 694 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms