RNA–Protein interactions for RNA: ENSMUST00000110505.7

Hmgb1-203, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,720 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-203ENSMUST00000110505 DpydQ8CHR6 1025 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Eif2b5Q8CHW4 717 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Cnot6Q8K3P5 557 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Stxbp5Q8K400 1152 aaKnown RBP4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Znf445Q8R2V3 986 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Fbxo21Q8VDH1 627 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 CrygnQ8VHL5 183 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Lpgat1Q91YX5 370 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Vps16Q920Q4 839 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Kctd10Q922M3 315 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Ranbp17Q99NF8 1088 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 RnmtQ9D0L8 465 aaKnown RBP4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Phf6Q9D4J7 364 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Tspan17Q9D7W4 270 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 MajinQ9D992 256 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Pes1Q9EQ61 584 aaKnown RBP4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Homer2Q9QWW1 354 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 GgcxQ9QYC7 757 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Zranb2Q9R020 330 aaKnown RBP4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Pmfbp1Q9WVQ0 1022 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Col27a1Q5QNQ9 1845 aa4.68□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Nup210Q9QY81 1886 aaKnown RBP4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Gm3285A0A1W2P7U0 201 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Gm12695A2AGB2 545 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Fam170bE9PXT9 378 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Zfp882E9Q4R4 555 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 G530012D18RikJ3QK25 139 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 GclmO09172 274 aaKnown RBP4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Mllt10O54826 1068 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 RngttO55236 597 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Hk1P17710 974 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Gli1P47806 1111 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Tmod1P49813 359 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 RenbpP82343 430 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 GaltQ03249 379 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Acp5Q05117 327 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Dact3Q0PHV7 610 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Lrrn4clQ3TYX2 239 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Trappc9Q3U0M1 1148 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Fdxacb1Q3UY23 622 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 1700057G04RikQ3V0U0 232 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 H2-Q2Q4KN81 360 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Hsf5Q5ND04 624 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Nlrp14Q6B966 993 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Gemin4Q6P6L6 1058 aaKnown RBP4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Tas2r104Q7M723 302 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Lats2Q7TSJ6 1042 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Atp6v0d2Q80SY3 350 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Tbc1d22bQ80VE5 505 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Hsfy2Q80Y37 392 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Nipa1Q8BHK1 323 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Entpd8Q8K0L2 497 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Pms1Q8K119 917 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Unc93b1Q8VCW4 598 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Olfr532Q8VGT4 309 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Hdac8Q8VH37 377 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Grk2Q99MK8 689 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Ssu72Q9CY97 194 aaKnown RBP4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Arpp21Q9DCB4 807 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Doc2gQ9ESN1 387 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Hip1rQ9JKY5 1068 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Gde1Q9JL56 331 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Egfl7Q9QXT5 275 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Clcn5Q9WVD4 746 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Shcbp1Q9Z179 668 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Spg11Q3UHA3 2430 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Cacna1gQ5SUF7 2381 aa4.67□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Gm16368A0A1Y7VNG9 144 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Dnai2A2AC93 623 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 PotegA5H0M4 473 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Pfkfb3A7UAK5 555 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Ankle1A8VU90 534 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Gm3676D3Z236 184 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Gimd1E9PW74 217 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Zfp384E9Q1A5 584 aaKnown RBP4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Adgrf2E9Q4J9 644 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Vmn2r111K7N674 857 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Map7O88735 730 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Ly6aP05533 134 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Krt18P05784 423 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 MybP06876 636 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Glb1P23780 647 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Tcea3P23881 347 aaKnown RBP4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Pdia3P27773 505 aaKnown RBP4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 BrafP28028 804 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Nkx1-2P42580 305 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Lrpap1P55302 360 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Exosc10P56960 887 aaKnown RBP4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Dlg3P70175 849 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Surf6P70279 355 aaKnown RBP4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Erbb2P70424 1256 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 CtscP97821 462 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 ArvcfP98203 962 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 March5Q3KNM2 278 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Rapgef1Q3UHC1 1224 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 LchnQ3UHG7 455 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Gm853Q3UNZ2 425 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Fbxl7Q5BJ29 491 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 ErmnQ5EBJ4 281 aa4.66□□□□□ -1.66
Hmgb1-203ENSMUST00000110505 Ntan1Q64311 310 aa4.66□□□□□ -1.66
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms