RNA–Protein interactions for RNA: YPR105C

COG4, Transcript of Essential component of the conserved oligomeric Golgi complex, yeastyeast

Gene COG4, Length 2,586 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COG4YPR105C IRE1P32361 1115 aa2.55□□□□□ -2
COG4YPR105C GEF1P37020 779 aa2.55□□□□□ -2
COG4YPR105C SHM1P37292 490 aaPredicted RBP2.55□□□□□ -2
COG4YPR105C DPH6Q12429 685 aa2.55□□□□□ -2
COG4YPR105C CHD1P32657 1468 aa2.55□□□□□ -2
COG4YPR105C RPS31P05759 152 aaKnown RBP2.55□□□□□ -2
COG4YPR105C SRS2P12954 1174 aa2.55□□□□□ -2
COG4YPR105C UBP15P50101 1230 aa2.55□□□□□ -2
COG4YPR105C RPL34AP87262 121 aaPredicted RBP2.55□□□□□ -2
COG4YPR105C PUN1Q06991 263 aa2.55□□□□□ -2
COG4YPR105C MDJ1P35191 511 aa2.54□□□□□ -2
COG4YPR105C HXT5P38695 592 aa2.54□□□□□ -2
COG4YPR105C JJJ3P47138 172 aa2.54□□□□□ -2
COG4YPR105C YNL165WP53891 406 aa2.54□□□□□ -2
COG4YPR105C CUZ1P53899 274 aa2.54□□□□□ -2
COG4YPR105C ALD4P46367 519 aaKnown RBP2.54□□□□□ -2
COG4YPR105C LYS5P50113 272 aa2.54□□□□□ -2
COG4YPR105C PSH1Q12161 406 aa2.54□□□□□ -2
COG4YPR105C Q0182Q9ZZW1 134 aa2.54□□□□□ -2
COG4YPR105C PDC6P26263 563 aaKnown RBP2.53□□□□□ -2
COG4YPR105C SCD5P34758 872 aa2.53□□□□□ -2
COG4YPR105C TPS3P38426 1054 aaKnown RBP2.53□□□□□ -2
COG4YPR105C YTA6P40328 754 aa2.53□□□□□ -2
COG4YPR105C PNP1Q05788 311 aa2.53□□□□□ -2
COG4YPR105C UTP4Q06679 776 aaKnown RBP2.53□□□□□ -2
COG4YPR105C PAN1P32521 1480 aa2.53□□□□□ -2
COG4YPR105C LEU1P07264 779 aaKnown RBP2.53□□□□□ -2.01
COG4YPR105C MLF3P32047 452 aa2.53□□□□□ -2.01
COG4YPR105C CDC3P32457 520 aaKnown RBP2.53□□□□□ -2.01
COG4YPR105C YBR197CP38306 217 aa2.53□□□□□ -2.01
COG4YPR105C ICP55P40051 511 aa2.53□□□□□ -2.01
COG4YPR105C CAB1Q04430 367 aa2.53□□□□□ -2.01
COG4YPR105C VPS15P22219 1454 aa2.52□□□□□ -2.01
COG4YPR105C ISC10P32645 267 aa2.52□□□□□ -2.01
COG4YPR105C TY1B-NL2Q99337 1749 aaKnown RBP2.51□□□□□ -2.01
COG4YPR105C MRPL33P20084 86 aa2.51□□□□□ -2.01
COG4YPR105C KAP122P32767 1081 aa2.51□□□□□ -2.01
COG4YPR105C ALD2P47771 506 aa2.51□□□□□ -2.01
COG4YPR105C FOX2Q02207 900 aaKnown RBP2.51□□□□□ -2.01
COG4YPR105C YMR265CQ03508 461 aaKnown RBP2.51□□□□□ -2.01
COG4YPR105C PUS1Q12211 544 aaKnown RBP2.51□□□□□ -2.01
COG4YPR105C LSO1Q3E827 93 aa2.51□□□□□ -2.01
COG4YPR105C RRN6P32786 894 aa2.51□□□□□ -2.01
COG4YPR105C CEM1P39525 442 aa2.51□□□□□ -2.01
COG4YPR105C NSG2P53898 299 aa2.51□□□□□ -2.01
COG4YPR105C NUP170P38181 1502 aa2.5□□□□□ -2.01
COG4YPR105C RGP1P16664 663 aa2.5□□□□□ -2.01
COG4YPR105C DIT1P21623 536 aa2.5□□□□□ -2.01
COG4YPR105C VMA3P25515 160 aa2.5□□□□□ -2.01
COG4YPR105C BOI1P38041 980 aaKnown RBP2.5□□□□□ -2.01
COG4YPR105C MRPL16P38064 232 aa2.5□□□□□ -2.01
COG4YPR105C BOL3P39724 118 aa2.5□□□□□ -2.01
COG4YPR105C LSB3P43603 459 aaKnown RBP2.5□□□□□ -2.01
COG4YPR105C MTO1P53070 669 aa2.5□□□□□ -2.01
COG4YPR105C THI72Q08579 599 aa2.5□□□□□ -2.01
COG4YPR105C SCC2Q04002 1493 aa2.5□□□□□ -2.01
COG4YPR105C FUR4P05316 633 aaKnown RBP2.5□□□□□ -2.01
COG4YPR105C QDR2P40474 542 aa2.5□□□□□ -2.01
COG4YPR105C YFL066CP43538 392 aa2.5□□□□□ -2.01
COG4YPR105C KAR5Q04746 504 aa2.5□□□□□ -2.01
COG4YPR105C PHM7Q12252 991 aa2.5□□□□□ -2.01
COG4YPR105C STB3Q12427 513 aa2.5□□□□□ -2.01
COG4YPR105C SKP1P52286 194 aa2.49□□□□□ -2.01
COG4YPR105C KRE33P53914 1056 aaKnown RBP2.49□□□□□ -2.01
COG4YPR105C SYT1Q06836 1226 aa2.49□□□□□ -2.01
COG4YPR105C APC11Q12157 165 aa2.49□□□□□ -2.01
COG4YPR105C BUD3P25558 1636 aa2.49□□□□□ -2.01
COG4YPR105C TY1B-BRQ12193 1756 aa2.49□□□□□ -2.01
COG4YPR105C TY1B-GR3Q12316 1755 aa2.49□□□□□ -2.01
COG4YPR105C TY1B-ORQ92393 1755 aa2.49□□□□□ -2.01
COG4YPR105C RPC31P17890 251 aa2.49□□□□□ -2.01
COG4YPR105C LDH1P38139 375 aa2.49□□□□□ -2.01
COG4YPR105C SPR3P41901 512 aa2.49□□□□□ -2.01
COG4YPR105C ADE12P80210 433 aaKnown RBP2.49□□□□□ -2.01
COG4YPR105C HAT1Q12341 374 aa2.49□□□□□ -2.01
COG4YPR105C YDR461C-AQ2V2P7 80 aa2.49□□□□□ -2.01
COG4YPR105C DNF3Q12674 1656 aa2.48□□□□□ -2.01
COG4YPR105C AI1P03875 834 aa2.48□□□□□ -2.01
COG4YPR105C DYS1P38791 387 aa2.48□□□□□ -2.01
COG4YPR105C TOP2P06786 1428 aaKnown RBP2.48□□□□□ -2.01
COG4YPR105C SPO14P36126 1683 aa2.48□□□□□ -2.01
COG4YPR105C RPP1AP05318 106 aaPredicted RBP2.48□□□□□ -2.01
COG4YPR105C SBE2P42223 864 aaKnown RBP2.48□□□□□ -2.01
COG4YPR105C ATG1P53104 897 aa2.48□□□□□ -2.01
COG4YPR105C CUS1Q02554 436 aaPredicted RBP2.48□□□□□ -2.01
COG4YPR105C TRL1P09880 827 aaKnown RBP2.47□□□□□ -2.01
COG4YPR105C FPS1P23900 669 aa2.47□□□□□ -2.01
COG4YPR105C GLO3P38682 493 aaKnown RBP2.47□□□□□ -2.01
COG4YPR105C ERP5P38819 212 aa2.47□□□□□ -2.01
COG4YPR105C QDR1P40475 563 aa2.47□□□□□ -2.01
COG4YPR105C ACF4P47129 309 aa2.47□□□□□ -2.01
COG4YPR105C YBL113CQ7M4S9 792 aa2.47□□□□□ -2.01
COG4YPR105C RPB10P22139 70 aa2.47□□□□□ -2.01
COG4YPR105C MSN1P22148 382 aa2.47□□□□□ -2.01
COG4YPR105C NAB2P32505 525 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
COG4YPR105C KTR2P33550 425 aa2.47□□□□□ -2.01
COG4YPR105C HXT8P40886 569 aa2.47□□□□□ -2.01
COG4YPR105C SUT1P53032 299 aaKnown RBP2.47□□□□□ -2.01
COG4YPR105C YNR040WP53736 256 aa2.47□□□□□ -2.01
COG4YPR105C YOR296WQ08748 1289 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 39.2 ms