RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W CUS1Q02554 436 aaPredicted RBP5.37□□□□□ -1.55
PEP12YOR036W UTP4Q06679 776 aaKnown RBP5.37□□□□□ -1.55
PEP12YOR036W TIF1P10081 395 aaKnown RBP5.36□□□□□ -1.55
PEP12YOR036W BIM1P40013 344 aa5.36□□□□□ -1.55
PEP12YOR036W RRM3P38766 723 aa5.35□□□□□ -1.55
PEP12YOR036W ACS2P52910 683 aaKnown RBP5.35□□□□□ -1.55
PEP12YOR036W MRP10O75012 95 aa5.34□□□□□ -1.55
PEP12YOR036W UBP1P25037 809 aa5.34□□□□□ -1.55
PEP12YOR036W RTG2P32608 588 aaKnown RBP5.34□□□□□ -1.55
PEP12YOR036W KAP122P32767 1081 aa5.34□□□□□ -1.55
PEP12YOR036W HXT5P38695 592 aa5.34□□□□□ -1.55
PEP12YOR036W SAC7P17121 654 aa5.33□□□□□ -1.56
PEP12YOR036W RPC31P17890 251 aa5.33□□□□□ -1.56
PEP12YOR036W SCD5P34758 872 aa5.33□□□□□ -1.56
PEP12YOR036W APM2P38700 605 aa5.33□□□□□ -1.56
PEP12YOR036W IRC24P40580 263 aa5.33□□□□□ -1.56
PEP12YOR036W ARI1P53111 347 aaKnown RBP5.32□□□□□ -1.56
PEP12YOR036W PHO87P25360 923 aa5.31□□□□□ -1.56
PEP12YOR036W KTR7P40504 517 aa5.31□□□□□ -1.56
PEP12YOR036W IDI1P15496 288 aa5.3□□□□□ -1.56
PEP12YOR036W SFA1P32771 386 aa5.3□□□□□ -1.56
PEP12YOR036W NGR1P32831 672 aaKnown RBP5.3□□□□□ -1.56
PEP12YOR036W YKR073CP36153 106 aa5.3□□□□□ -1.56
PEP12YOR036W TRP3P00937 484 aa5.29□□□□□ -1.56
PEP12YOR036W GAS4Q08271 471 aa5.29□□□□□ -1.56
PEP12YOR036W NAB2P32505 525 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
PEP12YOR036W QDR2P40474 542 aa5.28□□□□□ -1.56
PEP12YOR036W HAP4P14064 554 aa5.27□□□□□ -1.57
PEP12YOR036W RPL34BP40525 121 aaKnown RBP5.27□□□□□ -1.57
PEP12YOR036W AVT1P47082 602 aa5.27□□□□□ -1.57
PEP12YOR036W ROM1P53046 1155 aa5.27□□□□□ -1.57
PEP12YOR036W ITC1P53125 1264 aa5.27□□□□□ -1.57
PEP12YOR036W YLR122CQ12312 125 aa5.27□□□□□ -1.57
PEP12YOR036W COQ2P32378 372 aa5.25□□□□□ -1.57
PEP12YOR036W MED7Q08278 222 aa5.25□□□□□ -1.57
PEP12YOR036W KAE1P36132 386 aa5.24□□□□□ -1.57
PEP12YOR036W YER156CP40093 338 aaKnown RBP5.24□□□□□ -1.57
PEP12YOR036W SLP1Q12232 587 aa5.24□□□□□ -1.57
PEP12YOR036W TY4B-PA0A0B7P3V8 1104 aa5.23□□□□□ -1.57
PEP12YOR036W TED1P40533 473 aa5.23□□□□□ -1.57
PEP12YOR036W CTH1P47976 325 aa5.23□□□□□ -1.57
PEP12YOR036W TY4A-HQ6Q5P6 413 aa5.23□□□□□ -1.57
PEP12YOR036W GAL2P13181 574 aa5.22□□□□□ -1.57
PEP12YOR036W SUV3P32580 737 aa5.22□□□□□ -1.57
PEP12YOR036W TOS1P38288 455 aa5.22□□□□□ -1.57
PEP12YOR036W CAB1Q04430 367 aa5.22□□□□□ -1.57
PEP12YOR036W TY1A-NL1Q12391 440 aaKnown RBP5.22□□□□□ -1.57
PEP12YOR036W RSC6P25632 483 aa5.21□□□□□ -1.58
PEP12YOR036W LIP5P32875 414 aa5.21□□□□□ -1.58
PEP12YOR036W GIP2P40036 548 aa5.21□□□□□ -1.58
PEP12YOR036W YOR296WQ08748 1289 aa5.21□□□□□ -1.58
PEP12YOR036W VMA3P25515 160 aa5.2□□□□□ -1.58
PEP12YOR036W SAF1P38352 637 aa5.2□□□□□ -1.58
PEP12YOR036W BSD2P38356 321 aa5.2□□□□□ -1.58
PEP12YOR036W VAN1P23642 535 aa5.19□□□□□ -1.58
PEP12YOR036W PUB1P32588 453 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
PEP12YOR036W YGR130CP53278 816 aa5.19□□□□□ -1.58
PEP12YOR036W SOK2P53438 785 aaPredicted RBP5.19□□□□□ -1.58
PEP12YOR036W MRPL33P20084 86 aa5.18□□□□□ -1.58
PEP12YOR036W NAM7P30771 971 aaKnown RBP5.18□□□□□ -1.58
PEP12YOR036W AKR1P39010 764 aa5.18□□□□□ -1.58
PEP12YOR036W FOX2Q02207 900 aaKnown RBP5.17□□□□□ -1.58
PEP12YOR036W BRE4Q07660 1125 aa5.17□□□□□ -1.58
PEP12YOR036W CHS2P14180 963 aa5.16□□□□□ -1.58
PEP12YOR036W SIS2P36024 562 aa5.16□□□□□ -1.58
PEP12YOR036W GIP1P38229 639 aa5.16□□□□□ -1.58
PEP12YOR036W AOS1Q06624 347 aa5.16□□□□□ -1.58
PEP12YOR036W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
PEP12YOR036W ELM1P32801 640 aa5.15□□□□□ -1.59
PEP12YOR036W DYS1P38791 387 aa5.15□□□□□ -1.59
PEP12YOR036W YJL181WP46987 611 aa5.15□□□□□ -1.59
PEP12YOR036W CWH41P53008 833 aa5.15□□□□□ -1.59
PEP12YOR036W MAG2Q06436 670 aaKnown RBP5.15□□□□□ -1.59
PEP12YOR036W REC8Q12188 680 aa5.15□□□□□ -1.59
PEP12YOR036W PPT1P53043 513 aa5.14□□□□□ -1.59
PEP12YOR036W DSE4P53753 1117 aa5.14□□□□□ -1.59
PEP12YOR036W TRS33Q99394 268 aa5.14□□□□□ -1.59
PEP12YOR036W TGL4P36165 910 aa5.13□□□□□ -1.59
PEP12YOR036W YBR197CP38306 217 aa5.13□□□□□ -1.59
PEP12YOR036W HGH1P48362 394 aaKnown RBP5.13□□□□□ -1.59
PEP12YOR036W CYC7P00045 113 aa5.12□□□□□ -1.59
PEP12YOR036W LDH1P38139 375 aa5.12□□□□□ -1.59
PEP12YOR036W YIL165CP40446 119 aa5.12□□□□□ -1.59
PEP12YOR036W ECM23Q02710 187 aa5.12□□□□□ -1.59
PEP12YOR036W RSC2Q06488 889 aa5.12□□□□□ -1.59
PEP12YOR036W PAN5P38787 379 aa5.11□□□□□ -1.59
PEP12YOR036W SPO74P45819 413 aa5.11□□□□□ -1.59
PEP12YOR036W TFA2P36145 328 aa5.1□□□□□ -1.59
PEP12YOR036W ISW1P38144 1129 aa5.1□□□□□ -1.59
PEP12YOR036W SEA4P38164 1038 aa5.1□□□□□ -1.59
PEP12YOR036W INP51P40559 946 aaKnown RBP5.1□□□□□ -1.59
PEP12YOR036W MSN1P22148 382 aa5.09□□□□□ -1.59
PEP12YOR036W UBX7P38349 436 aa5.09□□□□□ -1.59
PEP12YOR036W ISC10P32645 267 aa5.08□□□□□ -1.6
PEP12YOR036W TTI1P36097 1038 aa5.08□□□□□ -1.6
PEP12YOR036W ALD4P46367 519 aaKnown RBP5.08□□□□□ -1.6
PEP12YOR036W EMG1Q06287 252 aaKnown RBP5.08□□□□□ -1.6
PEP12YOR036W POL5P39985 1022 aaKnown RBP5.07□□□□□ -1.6
PEP12YOR036W BIO5P53744 561 aaKnown RBP5.07□□□□□ -1.6
PEP12YOR036W ALD3P54114 506 aa5.07□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms