RNA–Protein interactions for RNA: YFL005W

SEC4, Transcript of Rab family GTPase, yeastyeast

Gene SEC4, Length 648 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Nucleus, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC4YFL005W BUD9P53226 547 aa5.56□□□□□ -1.52
SEC4YFL005W HEH2Q03281 663 aa5.56□□□□□ -1.52
SEC4YFL005W GAL2P13181 574 aa5.55□□□□□ -1.52
SEC4YFL005W AIM9P40053 627 aaKnown RBP5.55□□□□□ -1.52
SEC4YFL005W YFL034WP43564 1073 aa5.55□□□□□ -1.52
SEC4YFL005W PHO87P25360 923 aa5.54□□□□□ -1.52
SEC4YFL005W PGM2P37012 569 aaKnown RBP5.54□□□□□ -1.52
SEC4YFL005W ALG14P38242 237 aa5.54□□□□□ -1.52
SEC4YFL005W YNL165WP53891 406 aa5.54□□□□□ -1.52
SEC4YFL005W RPL34AP87262 121 aaPredicted RBP5.54□□□□□ -1.52
SEC4YFL005W RPS6AP0CX37 236 aaKnown RBP5.53□□□□□ -1.52
SEC4YFL005W RPS6BP0CX38 236 aaPredicted RBP5.53□□□□□ -1.52
SEC4YFL005W ROM1P53046 1155 aa5.53□□□□□ -1.52
SEC4YFL005W NTH2P35172 780 aa5.52□□□□□ -1.53
SEC4YFL005W TSC13Q99190 310 aa5.52□□□□□ -1.53
SEC4YFL005W UBX7P38349 436 aa5.51□□□□□ -1.53
SEC4YFL005W Q0182Q9ZZW1 134 aa5.51□□□□□ -1.53
SEC4YFL005W AI3P03877 415 aa5.49□□□□□ -1.53
SEC4YFL005W HAP4P14064 554 aa5.49□□□□□ -1.53
SEC4YFL005W MLF3P32047 452 aa5.49□□□□□ -1.53
SEC4YFL005W CDC3P32457 520 aaKnown RBP5.49□□□□□ -1.53
SEC4YFL005W PRK1P40494 810 aa5.49□□□□□ -1.53
SEC4YFL005W SAC7P17121 654 aa5.47□□□□□ -1.53
SEC4YFL005W NAR1P23503 491 aaKnown RBP5.47□□□□□ -1.53
SEC4YFL005W NCL1P38205 684 aaKnown RBP5.47□□□□□ -1.53
SEC4YFL005W GIS4Q04233 774 aa5.47□□□□□ -1.53
SEC4YFL005W GAS4Q08271 471 aa5.47□□□□□ -1.53
SEC4YFL005W CYT1P07143 309 aa5.46□□□□□ -1.54
SEC4YFL005W NAB2P32505 525 aaKnown RBP RIP-Chip data5.46□□□□□ -1.54not detected
SEC4YFL005W PGM1P33401 570 aaKnown RBP5.46□□□□□ -1.54
SEC4YFL005W SKP1P52286 194 aa5.46□□□□□ -1.54
SEC4YFL005W YML020WQ03722 664 aa5.46□□□□□ -1.54
SEC4YFL005W SUV3P32580 737 aa5.45□□□□□ -1.54
SEC4YFL005W MTO1P53070 669 aa5.45□□□□□ -1.54
SEC4YFL005W ARI1P53111 347 aaKnown RBP5.45□□□□□ -1.54
SEC4YFL005W NOP8Q08287 484 aaPredicted RBP5.45□□□□□ -1.54
SEC4YFL005W SFA1P32771 386 aa5.44□□□□□ -1.54
SEC4YFL005W UBP1P25037 809 aa5.43□□□□□ -1.54
SEC4YFL005W RRM3P38766 723 aa5.43□□□□□ -1.54
SEC4YFL005W AVT1P47082 602 aa5.43□□□□□ -1.54
SEC4YFL005W PUF6Q04373 656 aaKnown RBP5.43□□□□□ -1.54
SEC4YFL005W UTP4Q06679 776 aaKnown RBP5.43□□□□□ -1.54
SEC4YFL005W CWC15Q03772 175 aaKnown RBP5.42□□□□□ -1.54
SEC4YFL005W GAS5Q08193 484 aa5.42□□□□□ -1.54
SEC4YFL005W MED7Q08278 222 aa5.42□□□□□ -1.54
SEC4YFL005W VAN1P23642 535 aa5.41□□□□□ -1.54
SEC4YFL005W KAP122P32767 1081 aa5.41□□□□□ -1.54
SEC4YFL005W COQ2P32378 372 aa5.4□□□□□ -1.54
SEC4YFL005W NGR1P32831 672 aaKnown RBP5.4□□□□□ -1.54
SEC4YFL005W KAE1P36132 386 aa5.4□□□□□ -1.54
SEC4YFL005W APM2P38700 605 aa5.4□□□□□ -1.54
SEC4YFL005W HAT1Q12341 374 aa5.4□□□□□ -1.54
SEC4YFL005W SLD2P34252 453 aa5.39□□□□□ -1.55
SEC4YFL005W HXT5P38695 592 aa5.39□□□□□ -1.55
SEC4YFL005W YNR040WP53736 256 aa5.39□□□□□ -1.55
SEC4YFL005W CUS1Q02554 436 aaPredicted RBP5.39□□□□□ -1.55
SEC4YFL005W PUN1Q06991 263 aa5.39□□□□□ -1.55
SEC4YFL005W SSF1P38789 453 aaPredicted RBP5.38□□□□□ -1.55
SEC4YFL005W ALD4P46367 519 aaKnown RBP5.38□□□□□ -1.55
SEC4YFL005W CAB1Q04430 367 aa5.38□□□□□ -1.55
SEC4YFL005W SLP1Q12232 587 aa5.38□□□□□ -1.55
SEC4YFL005W TRS33Q99394 268 aa5.38□□□□□ -1.55
SEC4YFL005W TRP3P00937 484 aa5.37□□□□□ -1.55
SEC4YFL005W SRS2P12954 1174 aa5.37□□□□□ -1.55
SEC4YFL005W SCD5P34758 872 aa5.37□□□□□ -1.55
SEC4YFL005W YKR073CP36153 106 aa5.37□□□□□ -1.55
SEC4YFL005W RSC6P25632 483 aa5.36□□□□□ -1.55
SEC4YFL005W YBR197CP38306 217 aa5.36□□□□□ -1.55
SEC4YFL005W FOX2Q02207 900 aaKnown RBP5.36□□□□□ -1.55
SEC4YFL005W PNP1Q05788 311 aa5.36□□□□□ -1.55
SEC4YFL005W BOL3P39724 118 aa5.35□□□□□ -1.55
SEC4YFL005W YLR122CQ12312 125 aa5.35□□□□□ -1.55
SEC4YFL005W RPC31P17890 251 aa5.34□□□□□ -1.55
SEC4YFL005W PUB1P32588 453 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55 RIP-Chip
SEC4YFL005W LIP5P32875 414 aa5.34□□□□□ -1.55
SEC4YFL005W BOI1P38041 980 aaKnown RBP5.34□□□□□ -1.55
SEC4YFL005W CWH41P53008 833 aa5.34□□□□□ -1.55
SEC4YFL005W KAR5Q04746 504 aa5.34□□□□□ -1.55
SEC4YFL005W AOS1Q06624 347 aa5.34□□□□□ -1.55
SEC4YFL005W ISC10P32645 267 aa5.33□□□□□ -1.56
SEC4YFL005W YBL113CQ7M4S9 792 aa5.33□□□□□ -1.56
SEC4YFL005W TY4B-PA0A0B7P3V8 1104 aa5.32□□□□□ -1.56
SEC4YFL005W MRP10O75012 95 aa5.32□□□□□ -1.56
SEC4YFL005W FUR4P05316 633 aaKnown RBP5.32□□□□□ -1.56
SEC4YFL005W SAF1P38352 637 aa5.32□□□□□ -1.56
SEC4YFL005W TY4A-HQ6Q5P6 413 aa5.32□□□□□ -1.56
SEC4YFL005W CHS2P14180 963 aa5.31□□□□□ -1.56
SEC4YFL005W ELM1P32801 640 aa5.31□□□□□ -1.56
SEC4YFL005W TOS1P38288 455 aa5.31□□□□□ -1.56
SEC4YFL005W ERP5P38819 212 aa5.31□□□□□ -1.56
SEC4YFL005W STM1P39015 273 aaKnown RBP5.31□□□□□ -1.56
SEC4YFL005W CTH1P47976 325 aa5.31□□□□□ -1.56
SEC4YFL005W TRL1P09880 827 aaKnown RBP5.3□□□□□ -1.56
SEC4YFL005W IDI1P15496 288 aa5.3□□□□□ -1.56
SEC4YFL005W MRPL33P20084 86 aa5.3□□□□□ -1.56
SEC4YFL005W RRN6P32786 894 aa5.3□□□□□ -1.56
SEC4YFL005W KTR2P33550 425 aa5.3□□□□□ -1.56
SEC4YFL005W ATG1P53104 897 aa5.3□□□□□ -1.56
SEC4YFL005W SEN54Q02825 467 aaPredicted RBP5.3□□□□□ -1.56
SEC4YFL005W BRE4Q07660 1125 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms