RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	RTP1	Q12751	981 aa		4.71	□□□□□ -1.66
SPI1	YER150W	TMA7	Q3E764	64 aa	Known RBP	4.71	□□□□□ -1.66
SPI1	YER150W	CYB2	P00175	591 aa		4.7	□□□□□ -1.66
SPI1	YER150W	SPT2	P06843	333 aa	Predicted RBP	4.7	□□□□□ -1.66
SPI1	YER150W	PHO8	P11491	566 aa		4.7	□□□□□ -1.66
SPI1	YER150W	SDH2	P21801	266 aa		4.7	□□□□□ -1.66
SPI1	YER150W	MET4	P32389	672 aa		4.7	□□□□□ -1.66
SPI1	YER150W	TPS3	P38426	1054 aa	Known RBP	4.7	□□□□□ -1.66
SPI1	YER150W	IES5	P40060	125 aa		4.7	□□□□□ -1.66
SPI1	YER150W	SEC27	P41811	889 aa	Known RBP	4.7	□□□□□ -1.66
SPI1	YER150W	CTF4	Q01454	927 aa		4.7	□□□□□ -1.66
SPI1	YER150W	PRP3	Q03338	469 aa	Predicted RBP	4.7	□□□□□ -1.66
SPI1	YER150W	GRX3	Q03835	250 aa		4.7	□□□□□ -1.66
SPI1	YER150W	NUT2	Q06213	157 aa		4.7	□□□□□ -1.66
SPI1	YER150W	CDC73	Q06697	393 aa		4.7	□□□□□ -1.66
SPI1	YER150W	NYV1	Q12255	253 aa		4.7	□□□□□ -1.66
SPI1	YER150W	SPS1	P08458	490 aa		4.69	□□□□□ -1.66
SPI1	YER150W	BRF1	P29056	596 aa		4.69	□□□□□ -1.66
SPI1	YER150W	CDC11	P32458	415 aa		4.69	□□□□□ -1.66
SPI1	YER150W	PES4	P39684	611 aa		4.69	□□□□□ -1.66
SPI1	YER150W	TAF1	P46677	1066 aa		4.69	□□□□□ -1.66
SPI1	YER150W	ACF4	P47129	309 aa		4.69	□□□□□ -1.66
SPI1	YER150W	SRB7	P47822	140 aa		4.69	□□□□□ -1.66
SPI1	YER150W	GPI8	P49018	411 aa		4.69	□□□□□ -1.66
SPI1	YER150W	RTF1	P53064	558 aa		4.69	□□□□□ -1.66
SPI1	YER150W	HUL5	P53119	910 aa		4.69	□□□□□ -1.66
SPI1	YER150W	YNR029C	P53729	429 aa	Known RBP	4.69	□□□□□ -1.66
SPI1	YER150W	SRP1	Q02821	542 aa	Known RBP	4.69	□□□□□ -1.66
SPI1	YER150W	PKH3	Q03306	898 aa	Predicted RBP	4.69	□□□□□ -1.66
SPI1	YER150W	YLR257W	Q06146	321 aa	Known RBP	4.69	□□□□□ -1.66
SPI1	YER150W	YLR125W	Q12138	136 aa		4.69	□□□□□ -1.66
SPI1	YER150W	MPH2	P0CD99	609 aa		4.68	□□□□□ -1.66
SPI1	YER150W	GAL2	P13181	574 aa		4.68	□□□□□ -1.66
SPI1	YER150W	HAP4	P14064	554 aa		4.68	□□□□□ -1.66
SPI1	YER150W	PPH3	P32345	308 aa		4.68	□□□□□ -1.66
SPI1	YER150W	KIC1	P38692	1080 aa		4.68	□□□□□ -1.66
SPI1	YER150W	CHZ1	P40019	153 aa	Predicted RBP	4.68	□□□□□ -1.66
SPI1	YER150W	VHR2	P40041	505 aa		4.68	□□□□□ -1.66
SPI1	YER150W	KTR7	P40504	517 aa		4.68	□□□□□ -1.66
SPI1	YER150W	YPP1	P46951	817 aa		4.68	□□□□□ -1.66
SPI1	YER150W	MTR4	P47047	1073 aa	Known RBP	4.68	□□□□□ -1.66
SPI1	YER150W	PRP43	P53131	767 aa	Known RBP	4.68	□□□□□ -1.66
SPI1	YER150W	PUF6	Q04373	656 aa	Known RBP	4.68	□□□□□ -1.66
SPI1	YER150W	PPM2	Q08282	695 aa		4.68	□□□□□ -1.66
SPI1	YER150W	NOP14	Q99207	810 aa	Known RBP	4.68	□□□□□ -1.66
SPI1	YER150W	RNA1	P11745	407 aa	Known RBP	4.67	□□□□□ -1.66
SPI1	YER150W	MIP1	P15801	1254 aa		4.67	□□□□□ -1.66
SPI1	YER150W	GRX1	P25373	110 aa	Known RBP	4.67	□□□□□ -1.66
SPI1	YER150W	MCM2	P29469	868 aa		4.67	□□□□□ -1.66
SPI1	YER150W	RRN3	P36070	627 aa		4.67	□□□□□ -1.66
SPI1	YER150W	MEP1	P40260	492 aa		4.67	□□□□□ -1.66
SPI1	YER150W	MTO1	P53070	669 aa		4.67	□□□□□ -1.66
SPI1	YER150W	HST2	P53686	357 aa		4.67	□□□□□ -1.66
SPI1	YER150W	CWC24	P53769	259 aa		4.67	□□□□□ -1.66
SPI1	YER150W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
SPI1	YER150W	SAS4	Q04003	481 aa		4.67	□□□□□ -1.66
SPI1	YER150W	PHM6	Q05637	104 aa		4.67	□□□□□ -1.66
SPI1	YER150W	TCB1	Q12466	1186 aa		4.67	□□□□□ -1.66
SPI1	YER150W	NOP58	Q12499	511 aa	Known RBP	4.67	□□□□□ -1.66
SPI1	YER150W	FRT1	Q99332	602 aa		4.67	□□□□□ -1.66
SPI1	YER150W	THI4	P32318	326 aa		4.66	□□□□□ -1.66
SPI1	YER150W	SSH4	P32343	579 aa		4.66	□□□□□ -1.66
SPI1	YER150W	HIR1	P32479	840 aa		4.66	□□□□□ -1.66
SPI1	YER150W	ANP1	P32629	500 aa		4.66	□□□□□ -1.66
SPI1	YER150W	TIM23	P32897	222 aa		4.66	□□□□□ -1.66
SPI1	YER150W	MNR2	P35724	969 aa		4.66	□□□□□ -1.66
SPI1	YER150W	APL2	P36000	726 aa	Predicted RBP	4.66	□□□□□ -1.66
SPI1	YER150W	DJP1	P40564	432 aa		4.66	□□□□□ -1.66
SPI1	YER150W	TIM54	P47045	478 aa		4.66	□□□□□ -1.66
SPI1	YER150W	BFA1	P47113	574 aa		4.66	□□□□□ -1.66
SPI1	YER150W	YPL062W	Q02781	134 aa		4.66	□□□□□ -1.66
SPI1	YER150W	SPC19	Q03954	165 aa		4.66	□□□□□ -1.66
SPI1	YER150W	SPR28	Q04921	423 aa		4.66	□□□□□ -1.66
SPI1	YER150W	PNP1	Q05788	311 aa		4.66	□□□□□ -1.66
SPI1	YER150W	YLR352W	Q06479	807 aa		4.66	□□□□□ -1.66
SPI1	YER150W	VIP1	Q06685	1146 aa	Known RBP	4.66	□□□□□ -1.66
SPI1	YER150W	APL5	Q08951	932 aa	Known RBP	4.66	□□□□□ -1.66
SPI1	YER150W	MMP1	Q12372	583 aa		4.66	□□□□□ -1.66
SPI1	YER150W	FUR4	P05316	633 aa	Known RBP	4.65	□□□□□ -1.67
SPI1	YER150W	PIF1	P07271	859 aa		4.65	□□□□□ -1.67
SPI1	YER150W	SRS2	P12954	1174 aa		4.65	□□□□□ -1.67
SPI1	YER150W	ARG8	P18544	423 aa		4.65	□□□□□ -1.67
SPI1	YER150W	GFD2	P25370	566 aa	Known RBP	4.65	□□□□□ -1.67
SPI1	YER150W	PEP7	P32609	515 aa		4.65	□□□□□ -1.67
SPI1	YER150W	YKL222C	P35995	705 aa		4.65	□□□□□ -1.67
SPI1	YER150W	APE4	P38821	490 aa		4.65	□□□□□ -1.67
SPI1	YER150W	TAT2	P38967	592 aa		4.65	□□□□□ -1.67
SPI1	YER150W	BOL3	P39724	118 aa		4.65	□□□□□ -1.67
SPI1	YER150W	DOT6	P40059	670 aa	Known RBP	4.65	□□□□□ -1.67
SPI1	YER150W	QDR1	P40475	563 aa		4.65	□□□□□ -1.67
SPI1	YER150W	TMA17	Q12513	150 aa		4.65	□□□□□ -1.67
SPI1	YER150W	ADR1	P07248	1323 aa		4.65	□□□□□ -1.67
SPI1	YER150W	PGI1	P12709	554 aa	Known RBP	4.64	□□□□□ -1.67
SPI1	YER150W	YEF3	P16521	1044 aa	Known RBP	4.64	□□□□□ -1.67
SPI1	YER150W	ESS1	P22696	170 aa		4.64	□□□□□ -1.67
SPI1	YER150W	CLB5	P30283	435 aa		4.64	□□□□□ -1.67
SPI1	YER150W	PEX6	P33760	1030 aa		4.64	□□□□□ -1.67
SPI1	YER150W	PEX5	P35056	612 aa		4.64	□□□□□ -1.67
SPI1	YER150W	FPK1	P53739	893 aa		4.64	□□□□□ -1.67
SPI1	YER150W	UBX4	P54730	416 aa		4.64	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms