RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W RTG2P32608 588 aaKnown RBP7.2□□□□□ -1.26
RPN9YDR427W RPL34BP40525 121 aaKnown RBP7.2□□□□□ -1.26
RPN9YDR427W IRC24P40580 263 aa7.2□□□□□ -1.26
RPN9YDR427W CUS1Q02554 436 aaPredicted RBP7.2□□□□□ -1.26
RPN9YDR427W SAC7P17121 654 aa7.19□□□□□ -1.26
RPN9YDR427W TIF1P10081 395 aaKnown RBP7.18□□□□□ -1.26
RPN9YDR427W KAP122P32767 1081 aa7.18□□□□□ -1.26
RPN9YDR427W APM2P38700 605 aa7.18□□□□□ -1.26
RPN9YDR427W HGH1P48362 394 aaKnown RBP7.18□□□□□ -1.26
RPN9YDR427W RRM3P38766 723 aa7.17□□□□□ -1.26
RPN9YDR427W BIM1P40013 344 aa7.17□□□□□ -1.26
RPN9YDR427W ARI1P53111 347 aaKnown RBP7.17□□□□□ -1.26
RPN9YDR427W HAP4P14064 554 aa7.16□□□□□ -1.26
RPN9YDR427W UBP1P25037 809 aa7.16□□□□□ -1.26
RPN9YDR427W PHO87P25360 923 aa7.16□□□□□ -1.26
RPN9YDR427W PEP12P32854 288 aa7.16□□□□□ -1.26
RPN9YDR427W PGM1P33401 570 aaKnown RBP7.16□□□□□ -1.26
RPN9YDR427W SFA1P32771 386 aa7.15□□□□□ -1.26
RPN9YDR427W ATG32P40458 529 aa7.15□□□□□ -1.26
RPN9YDR427W ACS2P52910 683 aaKnown RBP7.14□□□□□ -1.27
RPN9YDR427W GAS5Q08193 484 aa7.14□□□□□ -1.27
RPN9YDR427W GAS4Q08271 471 aa7.14□□□□□ -1.27
RPN9YDR427W COQ2P32378 372 aa7.13□□□□□ -1.27
RPN9YDR427W SLP1Q12232 587 aa7.13□□□□□ -1.27
RPN9YDR427W NGR1P32831 672 aaKnown RBP7.12□□□□□ -1.27
RPN9YDR427W YNR040WP53736 256 aa7.12□□□□□ -1.27
RPN9YDR427W RPC31P17890 251 aa7.11□□□□□ -1.27
RPN9YDR427W HXT5P38695 592 aa7.11□□□□□ -1.27
RPN9YDR427W KTR7P40504 517 aa7.1□□□□□ -1.27
RPN9YDR427W MED7Q08278 222 aa7.1□□□□□ -1.27
RPN9YDR427W KAE1P36132 386 aa7.09□□□□□ -1.27
RPN9YDR427W RSC6P25632 483 aa7.08□□□□□ -1.28
RPN9YDR427W SIS2P36024 562 aa7.08□□□□□ -1.28
RPN9YDR427W QDR2P40474 542 aa7.07□□□□□ -1.28
RPN9YDR427W AVT1P47082 602 aa7.07□□□□□ -1.28
RPN9YDR427W IDI1P15496 288 aa7.06□□□□□ -1.28
RPN9YDR427W YER156CP40093 338 aaKnown RBP7.05□□□□□ -1.28
RPN9YDR427W CWH41P53008 833 aa7.05□□□□□ -1.28
RPN9YDR427W YLR122CQ12312 125 aa7.04□□□□□ -1.28
RPN9YDR427W MRP10O75012 95 aa7.03□□□□□ -1.28
RPN9YDR427W VAN1P23642 535 aa7.03□□□□□ -1.28
RPN9YDR427W LIP5P32875 414 aa7.03□□□□□ -1.28
RPN9YDR427W YKR073CP36153 106 aa7.03□□□□□ -1.28
RPN9YDR427W TRP3P00937 484 aa7.02□□□□□ -1.29
RPN9YDR427W GAL2P13181 574 aa7.02□□□□□ -1.29
RPN9YDR427W ROM1P53046 1155 aa7.02□□□□□ -1.29
RPN9YDR427W ITC1P53125 1264 aa7.02□□□□□ -1.29
RPN9YDR427W TY4B-PA0A0B7P3V8 1104 aa7.01□□□□□ -1.29
RPN9YDR427W RSC2Q06488 889 aa7.01□□□□□ -1.29
RPN9YDR427W TY4A-HQ6Q5P6 413 aa7.01□□□□□ -1.29
RPN9YDR427W TRS33Q99394 268 aa7.01□□□□□ -1.29
RPN9YDR427W CHS2P14180 963 aa7□□□□□ -1.29
RPN9YDR427W TOS1P38288 455 aa7□□□□□ -1.29
RPN9YDR427W SAF1P38352 637 aa7□□□□□ -1.29
RPN9YDR427W DSE4P53753 1117 aa7□□□□□ -1.29
RPN9YDR427W YOR296WQ08748 1289 aa7□□□□□ -1.29
RPN9YDR427W DYS1P38791 387 aa6.99□□□□□ -1.29
RPN9YDR427W GIP2P40036 548 aa6.99□□□□□ -1.29
RPN9YDR427W TED1P40533 473 aa6.99□□□□□ -1.29
RPN9YDR427W TAF7Q05021 590 aa6.99□□□□□ -1.29
RPN9YDR427W PUB1P32588 453 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
RPN9YDR427W AOS1Q06624 347 aa6.97□□□□□ -1.29
RPN9YDR427W TY1A-NL1Q12391 440 aaKnown RBP6.97□□□□□ -1.29
RPN9YDR427W GIP1P38229 639 aa6.96□□□□□ -1.3
RPN9YDR427W YGR130CP53278 816 aa6.96□□□□□ -1.3
RPN9YDR427W CAB1Q04430 367 aa6.96□□□□□ -1.3
RPN9YDR427W MRPL33P20084 86 aa6.95□□□□□ -1.3
RPN9YDR427W VMA3P25515 160 aa6.95□□□□□ -1.3
RPN9YDR427W SOK2P53438 785 aaPredicted RBP6.95□□□□□ -1.3
RPN9YDR427W BRE4Q07660 1125 aa6.95□□□□□ -1.3
RPN9YDR427W LDH1P38139 375 aa6.93□□□□□ -1.3
RPN9YDR427W AKR1P39010 764 aa6.93□□□□□ -1.3
RPN9YDR427W ISW1P38144 1129 aa6.92□□□□□ -1.3
RPN9YDR427W BSD2P38356 321 aa6.92□□□□□ -1.3
RPN9YDR427W CTH1P47976 325 aa6.92□□□□□ -1.3
RPN9YDR427W FOX2Q02207 900 aaKnown RBP6.92□□□□□ -1.3
RPN9YDR427W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
RPN9YDR427W ELM1P32801 640 aa6.91□□□□□ -1.3
RPN9YDR427W RLF2Q12495 606 aa6.91□□□□□ -1.3
RPN9YDR427W NAM7P30771 971 aaKnown RBP6.9□□□□□ -1.3
RPN9YDR427W SUV3P32580 737 aa6.9□□□□□ -1.3
RPN9YDR427W SPO74P45819 413 aa6.9□□□□□ -1.3
RPN9YDR427W YJL181WP46987 611 aa6.9□□□□□ -1.3
RPN9YDR427W PPT1P53043 513 aa6.9□□□□□ -1.3
RPN9YDR427W REC8Q12188 680 aa6.9□□□□□ -1.3
RPN9YDR427W CYC7P00045 113 aa6.89□□□□□ -1.31
RPN9YDR427W TGL4P36165 910 aa6.89□□□□□ -1.31
RPN9YDR427W ECM23Q02710 187 aa6.89□□□□□ -1.31
RPN9YDR427W MAG2Q06436 670 aaKnown RBP6.89□□□□□ -1.31
RPN9YDR427W YBR287WP38355 427 aa6.88□□□□□ -1.31
RPN9YDR427W YIL165CP40446 119 aa6.88□□□□□ -1.31
RPN9YDR427W LEM3P42838 414 aa6.88□□□□□ -1.31
RPN9YDR427W TTI1P36097 1038 aa6.87□□□□□ -1.31
RPN9YDR427W YBR197CP38306 217 aa6.86□□□□□ -1.31
RPN9YDR427W GUP1P53154 560 aa6.86□□□□□ -1.31
RPN9YDR427W PAN5P38787 379 aa6.85□□□□□ -1.31
RPN9YDR427W INP51P40559 946 aaKnown RBP6.85□□□□□ -1.31
RPN9YDR427W MSB1P21339 1137 aaKnown RBP6.84□□□□□ -1.31
RPN9YDR427W UBX7P38349 436 aa6.83□□□□□ -1.32
RPN9YDR427W MAE1P36013 669 aaKnown RBP6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms