RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 PROCA1Q8NCQ7 364 aaPredicted RBP11.5□□□□□ -0.57
CASC19-261ENST00000641853 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
CASC19-261ENST00000641853 SALL2Q9Y467 1007 aaPredicted RBP11.49□□□□□ -0.57
CASC19-261ENST00000641853 CSPP1Q1MSJ5 1256 aa11.48□□□□□ -0.57
CASC19-261ENST00000641853 FBXO31Q5XUX0 539 aaPredicted RBP11.48□□□□□ -0.57
CASC19-261ENST00000641853 QPCTQ16769 361 aa11.47□□□□□ -0.57
CASC19-261ENST00000641853 GOPCQ9HD26 462 aa11.47□□□□□ -0.57
CASC19-261ENST00000641853 Q3C1V9 767 aa11.46□□□□□ -0.57
CASC19-261ENST00000641853 CABLES1Q8TDN4 633 aa11.46□□□□□ -0.57
CASC19-261ENST00000641853 SPSB2Q99619 263 aa11.46□□□□□ -0.57
CASC19-261ENST00000641853 FMNL1O95466 1100 aaPredicted RBP11.46□□□□□ -0.58
CASC19-261ENST00000641853 TUSC1Q2TAM9 212 aa11.46□□□□□ -0.58
CASC19-261ENST00000641853 IFFO2Q5TF58 517 aa11.46□□□□□ -0.58
CASC19-261ENST00000641853 FAM160A2Q8N612 972 aaPredicted RBP11.46□□□□□ -0.58
CASC19-261ENST00000641853 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.46□□□□□ -0.58
CASC19-261ENST00000641853 ADH1BP00325 375 aa11.45□□□□□ -0.58
CASC19-261ENST00000641853 C6orf229H3BNL8 230 aa11.44□□□□□ -0.58
CASC19-261ENST00000641853 HRCP23327 699 aa11.44□□□□□ -0.58
CASC19-261ENST00000641853 LILRB3O75022 631 aa11.43□□□□□ -0.58
CASC19-261ENST00000641853 MTMR2Q13614 643 aa11.42□□□□□ -0.58
CASC19-261ENST00000641853 USB1Q9BQ65 265 aaKnown RBP11.42□□□□□ -0.58
CASC19-261ENST00000641853 PRDM9Q9NQV7 894 aa11.42□□□□□ -0.58
CASC19-261ENST00000641853 PRPF38BQ5VTL8 546 aaKnown RBP11.42□□□□□ -0.58
CASC19-261ENST00000641853 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
CASC19-261ENST00000641853 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
CASC19-261ENST00000641853 ZBTB3Q9H5J0 574 aa11.41□□□□□ -0.58
CASC19-261ENST00000641853 S1PR4O95977 384 aa11.4□□□□□ -0.58
CASC19-261ENST00000641853 PCMTD1Q96MG8 357 aaPredicted RBP11.4□□□□□ -0.58
CASC19-261ENST00000641853 CFAP99D6REC4 459 aa11.38□□□□□ -0.59
CASC19-261ENST00000641853 MSS51Q4VC12 460 aa11.38□□□□□ -0.59
CASC19-261ENST00000641853 SLC6A16Q9GZN6 736 aa11.38□□□□□ -0.59
CASC19-261ENST00000641853 TMEM132AQ24JP5 1023 aa11.38□□□□□ -0.59
CASC19-261ENST00000641853 PPP1R18Q6NYC8 613 aa11.38□□□□□ -0.59
CASC19-261ENST00000641853 PRR7Q8TB68 274 aa11.38□□□□□ -0.59
CASC19-261ENST00000641853 ATP1B4Q9UN42 357 aaPredicted RBP11.38□□□□□ -0.59
CASC19-261ENST00000641853 NUTM2BA6NNL0 878 aaPredicted RBP11.37□□□□□ -0.59
CASC19-261ENST00000641853 NUTM2EB1AL46 878 aaPredicted RBP11.37□□□□□ -0.59
CASC19-261ENST00000641853 NUTM2DQ5VT03 806 aaPredicted RBP11.37□□□□□ -0.59
CASC19-261ENST00000641853 NUTM2AQ8IVF1 878 aaPredicted RBP11.37□□□□□ -0.59
CASC19-261ENST00000641853 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
CASC19-261ENST00000641853 PPP2R2DQ66LE6 453 aa11.36□□□□□ -0.59
CASC19-261ENST00000641853 A0A0G2JS52 829 aa11.35□□□□□ -0.59
CASC19-261ENST00000641853 PPEF1O14829 653 aaPredicted RBP11.35□□□□□ -0.59
CASC19-261ENST00000641853 RNF223E7ERA6 249 aa11.34□□□□□ -0.59
CASC19-261ENST00000641853 DXOO77932 396 aaKnown RBP11.34□□□□□ -0.59
CASC19-261ENST00000641853 MMP16P51512 607 aa11.34□□□□□ -0.59
CASC19-261ENST00000641853 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.33□□□□□ -0.6
CASC19-261ENST00000641853 JUNDP17535 347 aa11.32□□□□□ -0.6
CASC19-261ENST00000641853 RFC5P40937 340 aa11.31□□□□□ -0.6
CASC19-261ENST00000641853 DESI1Q6ICB0 168 aa11.3□□□□□ -0.6
CASC19-261ENST00000641853 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
CASC19-261ENST00000641853 GGCXP38435 758 aa11.28□□□□□ -0.6
CASC19-261ENST00000641853 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
CASC19-261ENST00000641853 TSC1Q92574 1164 aa11.28□□□□□ -0.6
CASC19-261ENST00000641853 FCF1Q9Y324 198 aaKnown RBP11.28□□□□□ -0.6
CASC19-261ENST00000641853 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.6
CASC19-261ENST00000641853 LYPD8Q6UX82 237 aa11.27□□□□□ -0.61
CASC19-261ENST00000641853 ANKLE1Q8NAG6 615 aa11.27□□□□□ -0.61
CASC19-261ENST00000641853 EMID1Q96A84 441 aaPredicted RBP11.26□□□□□ -0.61
CASC19-261ENST00000641853 AP1G2O75843 785 aa11.25□□□□□ -0.61
CASC19-261ENST00000641853 PTPRNQ16849 979 aa11.24□□□□□ -0.61
CASC19-261ENST00000641853 NUDT12Q9BQG2 462 aa11.24□□□□□ -0.61
CASC19-261ENST00000641853 HELBQ8NG08 1087 aaPredicted RBP11.24□□□□□ -0.61
CASC19-261ENST00000641853 LRRN4Q8WUT4 740 aa11.23□□□□□ -0.61
CASC19-261ENST00000641853 CCNYL3P0C7X3 344 aa11.21□□□□□ -0.61
CASC19-261ENST00000641853 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
CASC19-261ENST00000641853 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.61
CASC19-261ENST00000641853 USP17L8P0C7I0 530 aa11.2□□□□□ -0.62
CASC19-261ENST00000641853 TMEM259Q4ZIN3 620 aa11.2□□□□□ -0.62
CASC19-261ENST00000641853 EVA1BQ9NVM1 165 aa11.2□□□□□ -0.62
CASC19-261ENST00000641853 F12P00748 615 aaPredicted RBP11.2□□□□□ -0.62
CASC19-261ENST00000641853 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
CASC19-261ENST00000641853 HMX1Q9NP08 348 aaPredicted RBP11.2□□□□□ -0.62
CASC19-261ENST00000641853 MAP10Q9P2G4 905 aa11.2□□□□□ -0.62
CASC19-261ENST00000641853 KCNH2Q12809 1159 aa11.17□□□□□ -0.62
CASC19-261ENST00000641853 SNRKQ9NRH2 765 aa11.17□□□□□ -0.62
CASC19-261ENST00000641853 PRKD2Q9BZL6 878 aa11.16□□□□□ -0.62
CASC19-261ENST00000641853 CTHP32929 405 aa11.15□□□□□ -0.62
CASC19-261ENST00000641853 BANK1Q8NDB2 785 aa11.15□□□□□ -0.62
CASC19-261ENST00000641853 EPS8L1Q8TE68 723 aa11.15□□□□□ -0.62
CASC19-261ENST00000641853 SLC19A1P41440 591 aa11.14□□□□□ -0.63
CASC19-261ENST00000641853 MTMR14Q8NCE2 650 aa11.13□□□□□ -0.63
CASC19-261ENST00000641853 UNC93B1Q9H1C4 597 aa11.13□□□□□ -0.63
CASC19-261ENST00000641853 NR6A1Q15406 480 aa11.13□□□□□ -0.63
CASC19-261ENST00000641853 TRIM34Q9BYJ4 488 aa11.13□□□□□ -0.63
CASC19-261ENST00000641853 TRIM32Q13049 653 aa11.12□□□□□ -0.63
CASC19-261ENST00000641853 RPIAP49247 311 aa11.11□□□□□ -0.63
CASC19-261ENST00000641853 GJD4Q96KN9 370 aaPredicted RBP11.11□□□□□ -0.63
CASC19-261ENST00000641853 V9GY48 417 aaPredicted RBP11.11□□□□□ -0.63
CASC19-261ENST00000641853 SPRYD7Q5W111 196 aa11.1□□□□□ -0.63
CASC19-261ENST00000641853 ZBTB24O43167 697 aaPredicted RBP11.09□□□□□ -0.63
CASC19-261ENST00000641853 RGS20O76081 388 aa11.09□□□□□ -0.63
CASC19-261ENST00000641853 MCM6Q14566 821 aa11.09□□□□□ -0.63
CASC19-261ENST00000641853 SKOR1P84550 965 aa11.07□□□□□ -0.64
CASC19-261ENST00000641853 BAP1Q92560 729 aa11.07□□□□□ -0.64
CASC19-261ENST00000641853 LINC01559Q495D7 138 aa11.06□□□□□ -0.64
CASC19-261ENST00000641853 CD2BP2O95400 341 aaKnown RBP11.06□□□□□ -0.64
CASC19-261ENST00000641853 ZNF598Q86UK7 904 aaKnown RBP11.06□□□□□ -0.64
CASC19-261ENST00000641853 SOCS7O14512 581 aa11.05□□□□□ -0.64
CASC19-261ENST00000641853 GPR37L1O60883 481 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms