RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 NCOA3Q9Y6Q9 1424 aa18.29■□□□□ 0.52
PHGDH-221ENST00000641573 CCDC7Q96M83 1385 aa18.29■□□□□ 0.52
PHGDH-221ENST00000641573 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-221ENST00000641573 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-221ENST00000641573 ATF3P18847 181 aa18.28■□□□□ 0.52
PHGDH-221ENST00000641573 NUTM2DQ5VT03 806 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-221ENST00000641573 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
PHGDH-221ENST00000641573 PLEKHG1Q9ULL1 1385 aa18.28■□□□□ 0.52
PHGDH-221ENST00000641573 CHD2O14647 1828 aaKnown RBP18.28■□□□□ 0.52
PHGDH-221ENST00000641573 C14orf93Q9H972 538 aaKnown RBP18.27■□□□□ 0.52
PHGDH-221ENST00000641573 KIF7Q2M1P5 1343 aa18.25■□□□□ 0.51
PHGDH-221ENST00000641573 MIER1Q8N108 512 aa18.25■□□□□ 0.51
PHGDH-221ENST00000641573 AFF2P51816 1311 aa18.24■□□□□ 0.51
PHGDH-221ENST00000641573 C19orf44Q9H6X5 657 aa18.24■□□□□ 0.51
PHGDH-221ENST00000641573 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
PHGDH-221ENST00000641573 SETBP1Q9Y6X0 1596 aa18.23■□□□□ 0.51
PHGDH-221ENST00000641573 SRCAPQ6ZRS2 3230 aa18.23■□□□□ 0.51
PHGDH-221ENST00000641573 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
PHGDH-221ENST00000641573 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.22■□□□□ 0.51
PHGDH-221ENST00000641573 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.51
PHGDH-221ENST00000641573 EIF3AQ14152 1382 aaKnown RBP18.2■□□□□ 0.5
PHGDH-221ENST00000641573 ADGRB1O14514 1584 aa18.19■□□□□ 0.5
PHGDH-221ENST00000641573 DIP2AQ14689 1571 aa18.19■□□□□ 0.5
PHGDH-221ENST00000641573 TESK2Q96S53 571 aa18.19■□□□□ 0.5
PHGDH-221ENST00000641573 RGS12O14924 1447 aa18.18■□□□□ 0.5
PHGDH-221ENST00000641573 ADAMTS13Q76LX8 1427 aa18.18■□□□□ 0.5
PHGDH-221ENST00000641573 RBM6P78332 1123 aaKnown RBP18.18■□□□□ 0.5
PHGDH-221ENST00000641573 BRINP3Q76B58 766 aa18.18■□□□□ 0.5
PHGDH-221ENST00000641573 POLR3GLQ9BT43 218 aa18.18■□□□□ 0.5
PHGDH-221ENST00000641573 TMEM132EQ6IEE7 984 aa18.17■□□□□ 0.5
PHGDH-221ENST00000641573 C8orf37Q96NL8 207 aa18.17■□□□□ 0.5
PHGDH-221ENST00000641573 PIK3R4Q99570 1358 aa18.17■□□□□ 0.5
PHGDH-221ENST00000641573 QTRT2Q9H974 415 aaKnown RBP18.16■□□□□ 0.5
PHGDH-221ENST00000641573 NRXN3Q9Y4C0 1643 aa18.15■□□□□ 0.5
PHGDH-221ENST00000641573 TMF1P82094 1093 aa18.14■□□□□ 0.49
PHGDH-221ENST00000641573 LRRC59Q96AG4 307 aaKnown RBP18.14■□□□□ 0.49
PHGDH-221ENST00000641573 NGLY1Q96IV0 654 aa18.14■□□□□ 0.49
PHGDH-221ENST00000641573 DCCP43146 1447 aa18.14■□□□□ 0.49
PHGDH-221ENST00000641573 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
PHGDH-221ENST00000641573 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
PHGDH-221ENST00000641573 TRAK1Q9UPV9 953 aa18.13■□□□□ 0.49
PHGDH-221ENST00000641573 ATAD2Q6PL18 1390 aa18.13■□□□□ 0.49
PHGDH-221ENST00000641573 AMOTL2Q9Y2J4 779 aa18.11■□□□□ 0.49
PHGDH-221ENST00000641573 CENPJQ9HC77 1338 aaPredicted RBP18.1■□□□□ 0.49
PHGDH-221ENST00000641573 ANP32CO43423 234 aa18.1■□□□□ 0.49
PHGDH-221ENST00000641573 NHSL1Q5SYE7 1610 aa18.09■□□□□ 0.49
PHGDH-221ENST00000641573 SLC24A1O60721 1099 aa18.09■□□□□ 0.49
PHGDH-221ENST00000641573 SBNO2Q9Y2G9 1366 aa18.07■□□□□ 0.48
PHGDH-221ENST00000641573 CDCA8Q53HL2 280 aa18.07■□□□□ 0.48
PHGDH-221ENST00000641573 STK26Q9P289 416 aa18.07■□□□□ 0.48
PHGDH-221ENST00000641573 MST1RQ04912 1400 aa18.06■□□□□ 0.48
PHGDH-221ENST00000641573 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
PHGDH-221ENST00000641573 PNPLA6Q8IY17 1366 aa18.06■□□□□ 0.48
PHGDH-221ENST00000641573 XRN1Q8IZH2 1706 aaKnown RBP18.06■□□□□ 0.48
PHGDH-221ENST00000641573 ADAMTS2O95450 1211 aa18.05■□□□□ 0.48
PHGDH-221ENST00000641573 ARHGEF28Q8N1W1 1705 aaKnown RBP18.04■□□□□ 0.48
PHGDH-221ENST00000641573 PTPRUQ92729 1446 aa18.04■□□□□ 0.48
PHGDH-221ENST00000641573 QRICH2Q9H0J4 1663 aa18.03■□□□□ 0.48
PHGDH-221ENST00000641573 LRPPRCP42704 1394 aaKnown RBP18.03■□□□□ 0.48
PHGDH-221ENST00000641573 USP21Q9UK80 565 aa18.02■□□□□ 0.48
PHGDH-221ENST00000641573 TRPC5Q9UL62 973 aaPredicted RBP18.02■□□□□ 0.48
PHGDH-221ENST00000641573 DDX17Q92841 729 aaKnown RBP18.01■□□□□ 0.47
PHGDH-221ENST00000641573 METP08581 1390 aa18.01■□□□□ 0.47
PHGDH-221ENST00000641573 DLC1Q96QB1 1528 aa17.99■□□□□ 0.47
PHGDH-221ENST00000641573 CCDC125Q86Z20 511 aa17.99■□□□□ 0.47
PHGDH-221ENST00000641573 PRAM1Q96QH2 718 aa17.99■□□□□ 0.47
PHGDH-221ENST00000641573 POGKQ9P215 609 aa17.99■□□□□ 0.47
PHGDH-221ENST00000641573 ABCC11Q96J66 1382 aa17.99■□□□□ 0.47
PHGDH-221ENST00000641573 CCER2I3L3R5 266 aa17.98■□□□□ 0.47
PHGDH-221ENST00000641573 ADGRL3Q9HAR2 1447 aa17.98■□□□□ 0.47
PHGDH-221ENST00000641573 SAFB2Q14151 953 aaKnown RBP eCLIP17.97■□□□□ 0.47
PHGDH-221ENST00000641573 PRKRIP1Q9H875 184 aaPredicted RBP17.96■□□□□ 0.47
PHGDH-221ENST00000641573 PANK3Q9H999 370 aa17.96■□□□□ 0.47
PHGDH-221ENST00000641573 EVC2Q86UK5 1308 aa17.96■□□□□ 0.46
PHGDH-221ENST00000641573 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
PHGDH-221ENST00000641573 TULP4Q9NRJ4 1543 aa17.94■□□□□ 0.46
PHGDH-221ENST00000641573 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
PHGDH-221ENST00000641573 EP400Q96L91 3159 aa17.94■□□□□ 0.46
PHGDH-221ENST00000641573 KNDC1Q76NI1 1749 aa17.93■□□□□ 0.46
PHGDH-221ENST00000641573 TECPR2O15040 1411 aa17.93■□□□□ 0.46
PHGDH-221ENST00000641573 ATRNO75882 1429 aa17.93■□□□□ 0.46
PHGDH-221ENST00000641573 FNBP4Q8N3X1 1017 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-221ENST00000641573 PUS7Q96PZ0 661 aaKnown RBP17.93■□□□□ 0.46
PHGDH-221ENST00000641573 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
PHGDH-221ENST00000641573 NALCNQ8IZF0 1738 aa17.92■□□□□ 0.46
PHGDH-221ENST00000641573 PER1O15534 1290 aaPredicted RBP17.92■□□□□ 0.46
PHGDH-221ENST00000641573 WAPLQ7Z5K2 1190 aa17.92■□□□□ 0.46
PHGDH-221ENST00000641573 C1orf167Q5SNV9 1468 aa17.92■□□□□ 0.46
PHGDH-221ENST00000641573 MYOM1P52179 1685 aa17.92■□□□□ 0.46
PHGDH-221ENST00000641573 PLEKHH1Q9ULM0 1364 aa17.91■□□□□ 0.46
PHGDH-221ENST00000641573 SOS2Q07890 1332 aaPredicted RBP17.9■□□□□ 0.46
PHGDH-221ENST00000641573 CNGB1Q14028 1251 aaPredicted RBP17.89■□□□□ 0.45
PHGDH-221ENST00000641573 YTHDC1Q96MU7 727 aaKnown RBP17.88■□□□□ 0.45
PHGDH-221ENST00000641573 CABP2Q9NPB3 220 aa17.88■□□□□ 0.45
PHGDH-221ENST00000641573 SRPK2P78362 688 aaKnown RBP17.87■□□□□ 0.45
PHGDH-221ENST00000641573 TMC1Q8TDI8 760 aa17.87■□□□□ 0.45
PHGDH-221ENST00000641573 ROBO2Q9HCK4 1378 aa17.87■□□□□ 0.45
PHGDH-221ENST00000641573 RALBP1Q15311 655 aa17.86■□□□□ 0.45
PHGDH-221ENST00000641573 ORAI2Q96SN7 254 aa17.86■□□□□ 0.45
PHGDH-221ENST00000641573 CDK19Q9BWU1 502 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms