RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	PDE3A	Q14432	1141 aa		13.83	□□□□□ -0.2
SPIN3-231	ENST00000639895	CFAP44	Q96MT7	982 aa		13.83	□□□□□ -0.2
SPIN3-231	ENST00000639895	ZNF830	Q96NB3	372 aa	Predicted RBP	13.82	□□□□□ -0.2
SPIN3-231	ENST00000639895	ROCK1	Q13464	1354 aa		13.82	□□□□□ -0.2
SPIN3-231	ENST00000639895	PRIMPOL	Q96LW4	560 aa		13.82	□□□□□ -0.2
SPIN3-231	ENST00000639895	CHMP3	Q9Y3E7	222 aa		13.82	□□□□□ -0.2
SPIN3-231	ENST00000639895	SNAPC4	Q5SXM2	1469 aa		13.82	□□□□□ -0.2
SPIN3-231	ENST00000639895	CTTNBP2	Q8WZ74	1663 aa		13.82	□□□□□ -0.2
SPIN3-231	ENST00000639895	TRIM6-TRIM34	B2RNG4	842 aa		13.82	□□□□□ -0.2
SPIN3-231	ENST00000639895	RSPH4A	Q5TD94	716 aa		13.82	□□□□□ -0.2
SPIN3-231	ENST00000639895	TRIM34	Q9BYJ4	488 aa		13.82	□□□□□ -0.2
SPIN3-231	ENST00000639895	THOC2	Q8NI27	1593 aa	Known RBP	13.81	□□□□□ -0.2
SPIN3-231	ENST00000639895	NCOA1	Q15788	1441 aa		13.81	□□□□□ -0.2
SPIN3-231	ENST00000639895	CCDC112	Q8NEF3	446 aa		13.81	□□□□□ -0.2
SPIN3-231	ENST00000639895	RIPK4	P57078	832 aa		13.81	□□□□□ -0.2
SPIN3-231	ENST00000639895	KLHL40	Q2TBA0	621 aa		13.81	□□□□□ -0.2
SPIN3-231	ENST00000639895	GAS2L3	Q86XJ1	694 aa		13.81	□□□□□ -0.2
SPIN3-231	ENST00000639895	ANKRD30B	Q9BXX2	1392 aa		13.8	□□□□□ -0.2
SPIN3-231	ENST00000639895	TPD52L1	Q16890	204 aa	Predicted RBP	13.8	□□□□□ -0.2
SPIN3-231	ENST00000639895	DZIP1L	Q8IYY4	767 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-231	ENST00000639895	NOL7	Q9UMY1	257 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-231	ENST00000639895	CCDC144A	A2RUR9	1427 aa		13.8	□□□□□ -0.2
SPIN3-231	ENST00000639895	RBM27	Q9P2N5	1060 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-231	ENST00000639895	KIAA1107	Q9UPP5	1409 aa		13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	TRO	Q12816	1431 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	CERS3	Q8IU89	383 aa		13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	UGGT2	Q9NYU1	1516 aa		13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	UTP14C	Q5TAP6	766 aa	Known RBP	13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	MRC2	Q9UBG0	1479 aa		13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	NOM1	Q5C9Z4	860 aa	Known RBP	13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	TSPYL1	Q9H0U9	437 aa		13.79	□□□□□ -0.2
SPIN3-231	ENST00000639895	BAG4	O95429	457 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-231	ENST00000639895	GNL2	Q13823	731 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-231	ENST00000639895	ZSCAN23	Q3MJ62	389 aa		13.78	□□□□□ -0.2
SPIN3-231	ENST00000639895	MORC1	Q86VD1	984 aa		13.78	□□□□□ -0.2
SPIN3-231	ENST00000639895	PRG4	Q92954	1404 aa	Predicted RBP	13.78	□□□□□ -0.2
SPIN3-231	ENST00000639895	STAC3	Q96MF2	364 aa		13.78	□□□□□ -0.2
SPIN3-231	ENST00000639895	U2AF2	P26368	475 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	8e-6	■■■■□ 19.7
SPIN3-231	ENST00000639895	HS1BP3	Q53T59	392 aa		13.78	□□□□□ -0.2
SPIN3-231	ENST00000639895	USP25	Q9UHP3	1055 aa		13.78	□□□□□ -0.2
SPIN3-231	ENST00000639895	CCAR2	Q8N163	923 aa	Known RBP	13.77	□□□□□ -0.2
SPIN3-231	ENST00000639895	GPATCH11	Q8N954	259 aa		13.77	□□□□□ -0.2
SPIN3-231	ENST00000639895	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SPIN3-231	ENST00000639895	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SPIN3-231	ENST00000639895	CWC15	Q9P013	229 aa	Known RBP	13.77	□□□□□ -0.21
SPIN3-231	ENST00000639895	PRIM1	P49642	420 aa	Known RBP	13.77	□□□□□ -0.21
SPIN3-231	ENST00000639895	PRDM4	Q9UKN5	801 aa		13.76	□□□□□ -0.21
SPIN3-231	ENST00000639895	ABCC5	O15440	1437 aa		13.76	□□□□□ -0.21
SPIN3-231	ENST00000639895	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.76	□□□□□ -0.21
SPIN3-231	ENST00000639895	PATL2	C9JE40	543 aa	Known RBP	13.76	□□□□□ -0.21
SPIN3-231	ENST00000639895	IFT140	Q96RY7	1462 aa		13.76	□□□□□ -0.21
SPIN3-231	ENST00000639895	TTC12	Q9H892	705 aa	Predicted RBP	13.75	□□□□□ -0.21
SPIN3-231	ENST00000639895	KIAA0586	Q9BVV6	1533 aa		13.75	□□□□□ -0.21
SPIN3-231	ENST00000639895	RPRD2	Q5VT52	1461 aa	Known RBP	13.75	□□□□□ -0.21
SPIN3-231	ENST00000639895	DDX19B	Q9UMR2	479 aa		13.75	□□□□□ -0.21
SPIN3-231	ENST00000639895	DUSP27	Q5VZP5	1158 aa		13.74	□□□□□ -0.21
SPIN3-231	ENST00000639895	KDM2B	Q8NHM5	1336 aa		13.74	□□□□□ -0.21
SPIN3-231	ENST00000639895	PTPRG	P23470	1445 aa		13.74	□□□□□ -0.21
SPIN3-231	ENST00000639895	TPM3	P06753	285 aa		13.73	□□□□□ -0.21
SPIN3-231	ENST00000639895	GTF2E1	P29083	439 aa	Predicted RBP	13.73	□□□□□ -0.21
SPIN3-231	ENST00000639895	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.73	□□□□□ -0.21
SPIN3-231	ENST00000639895	GOLGA6L19	H0YKK7	550 aa		13.73	□□□□□ -0.21
SPIN3-231	ENST00000639895	NPM1	P06748	294 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SPIN3-231	ENST00000639895	EFCAB2	Q5VUJ9	269 aa		13.73	□□□□□ -0.21
SPIN3-231	ENST00000639895	MYRIP	Q8NFW9	859 aa		13.73	□□□□□ -0.21
SPIN3-231	ENST00000639895	HOMER1	Q86YM7	354 aa		13.73	□□□□□ -0.21
SPIN3-231	ENST00000639895	TRIM5	Q9C035	493 aa		13.72	□□□□□ -0.21
SPIN3-231	ENST00000639895	SLFN5	Q08AF3	891 aa		13.72	□□□□□ -0.21
SPIN3-231	ENST00000639895	C16orf45	Q96MC5	204 aa	Predicted RBP	13.72	□□□□□ -0.21
SPIN3-231	ENST00000639895	RBSN	Q9H1K0	784 aa		13.72	□□□□□ -0.21
SPIN3-231	ENST00000639895	DNAJC5B	Q9UF47	199 aa		13.72	□□□□□ -0.21
SPIN3-231	ENST00000639895	DEF6	Q9H4E7	631 aa		13.72	□□□□□ -0.21
SPIN3-231	ENST00000639895	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.72	□□□□□ -0.21
SPIN3-231	ENST00000639895	RTF1	Q92541	710 aa	Known RBP	13.72	□□□□□ -0.21
SPIN3-231	ENST00000639895	GTF2A1	P52655	376 aa	Predicted RBP	13.71	□□□□□ -0.21
SPIN3-231	ENST00000639895	RABEP1	Q15276	862 aa		13.71	□□□□□ -0.21
SPIN3-231	ENST00000639895	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
SPIN3-231	ENST00000639895	GORAB	Q5T7V8	394 aa		13.71	□□□□□ -0.21
SPIN3-231	ENST00000639895	PPP1R9B	Q96SB3	815 aa		13.71	□□□□□ -0.21
SPIN3-231	ENST00000639895	TCOF1	Q13428	1488 aa	Known RBP	13.71	□□□□□ -0.22
SPIN3-231	ENST00000639895	ZBTB22	O15209	634 aa		13.71	□□□□□ -0.22
SPIN3-231	ENST00000639895	SKIDA1	Q1XH10	827 aa		13.71	□□□□□ -0.22
SPIN3-231	ENST00000639895	KRT222	Q8N1A0	295 aa		13.71	□□□□□ -0.22
SPIN3-231	ENST00000639895	KANK1	Q14678	1352 aa		13.71	□□□□□ -0.22
SPIN3-231	ENST00000639895	C9orf84	Q5VXU9	1444 aa		13.71	□□□□□ -0.22
SPIN3-231	ENST00000639895	BECN2	A8MW95	431 aa		13.7	□□□□□ -0.22
SPIN3-231	ENST00000639895	SET	Q01105	290 aa	Predicted RBP	13.7	□□□□□ -0.22
SPIN3-231	ENST00000639895	MNS1	Q8NEH6	495 aa		13.7	□□□□□ -0.22
SPIN3-231	ENST00000639895	POLR3G	O15318	223 aa	Predicted RBP	13.7	□□□□□ -0.22
SPIN3-231	ENST00000639895	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.7	□□□□□ -0.22
SPIN3-231	ENST00000639895	ZFP91	Q96JP5	570 aa	Predicted RBP	13.7	□□□□□ -0.22
SPIN3-231	ENST00000639895	TOMM22	Q9NS69	142 aa		13.7	□□□□□ -0.22
SPIN3-231	ENST00000639895	TAOK2	Q9UL54	1235 aa		13.7	□□□□□ -0.22
SPIN3-231	ENST00000639895	CDC45	O75419	566 aa		13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	ZNF500	O60304	480 aa	Predicted RBP	13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	RAB3GAP1	Q15042	981 aa		13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	ANTXR1	Q9H6X2	564 aa		13.69	□□□□□ -0.22
SPIN3-231	ENST00000639895	REC8	O95072	547 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms