RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 KIF15Q9NS87 1388 aa23.09■■□□□ 1.29
CACNA1A-257ENST00000638009 JMYQ8N9B5 988 aa23.09■■□□□ 1.29
CACNA1A-257ENST00000638009 TRIM5Q9C035 493 aa23.08■■□□□ 1.29
CACNA1A-257ENST00000638009 C9orf78Q9NZ63 289 aaPredicted RBP23.08■■□□□ 1.29
CACNA1A-257ENST00000638009 MCM2P49736 904 aa23.08■■□□□ 1.29
CACNA1A-257ENST00000638009 MAP9Q49MG5 647 aa23.08■■□□□ 1.28
CACNA1A-257ENST00000638009 CDK5RAP3Q96JB5 506 aa23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 POLR3GO15318 223 aaPredicted RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 RRP9O43818 475 aaKnown RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 RBM33Q96EV2 1170 aaKnown RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 ANKRD18BA2A2Z9 1011 aa23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 FOXD4L6Q3SYB3 417 aaPredicted RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 FOXD4L3Q6VB84 417 aaPredicted RBP23.07■■□□□ 1.28
CACNA1A-257ENST00000638009 RAD21O60216 631 aa23.06■■□□□ 1.28
CACNA1A-257ENST00000638009 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
CACNA1A-257ENST00000638009 FANCIQ9NVI1 1328 aa23.06■■□□□ 1.28
CACNA1A-257ENST00000638009 SETD5Q9C0A6 1442 aa23.05■■□□□ 1.28
CACNA1A-257ENST00000638009 LUZP1Q86V48 1076 aa23.05■■□□□ 1.28
CACNA1A-257ENST00000638009 DDX19BQ9UMR2 479 aa23.05■■□□□ 1.28
CACNA1A-257ENST00000638009 IFIT2P09913 472 aaKnown RBP23.05■■□□□ 1.28
CACNA1A-257ENST00000638009 DDX58O95786 925 aaKnown RBP23.04■■□□□ 1.28
CACNA1A-257ENST00000638009 UACAQ9BZF9 1416 aa23.04■■□□□ 1.28
CACNA1A-257ENST00000638009 BAZ1AQ9NRL2 1556 aaPredicted RBP23.04■■□□□ 1.28
CACNA1A-257ENST00000638009 VPS37CA5D8V6 355 aaPredicted RBP23.04■■□□□ 1.28
CACNA1A-257ENST00000638009 GBP3Q9H0R5 595 aa23.03■■□□□ 1.28
CACNA1A-257ENST00000638009 C1orf141Q5JVX7 400 aa23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 PDIA4P13667 645 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 MICALCLQ6ZW33 695 aa23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 SHTN1A0MZ66 631 aa23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 SLC3A2P08195 630 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 DDX23Q9BUQ8 820 aaKnown RBP23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 BCCIPQ9P287 314 aaKnown RBP eCLIP23.02■■□□□ 1.28
CACNA1A-257ENST00000638009 TAX1BP1Q86VP1 789 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 AMPHP49418 695 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 SMC2O95347 1197 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 ZKSCAN2Q63HK3 967 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 V9GYY5 206 aaPredicted RBP23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 HMGB1P1B2RPK0 211 aaPredicted RBP23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 E9PSI1 815 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 CENPHQ9H3R5 247 aa23.01■■□□□ 1.27
CACNA1A-257ENST00000638009 PPFIBP1Q86W92 1011 aa23■■□□□ 1.27
CACNA1A-257ENST00000638009 CCDC175P0C221 793 aa23■■□□□ 1.27
CACNA1A-257ENST00000638009 TMEM132AQ24JP5 1023 aa23■■□□□ 1.27
CACNA1A-257ENST00000638009 CCDC97Q96F63 343 aaPredicted RBP23■■□□□ 1.27
CACNA1A-257ENST00000638009 MAP2K1Q02750 393 aaPredicted RBP23■■□□□ 1.27
CACNA1A-257ENST00000638009 ZNF396Q96N95 335 aaPredicted RBP23■■□□□ 1.27
CACNA1A-257ENST00000638009 KIF2AO00139 706 aaPredicted RBP22.99■■□□□ 1.27
CACNA1A-257ENST00000638009 CETN2P41208 172 aa22.99■■□□□ 1.27
CACNA1A-257ENST00000638009 JAKMIP3Q5VZ66 844 aa22.99■■□□□ 1.27
CACNA1A-257ENST00000638009 PDE4AP27815 886 aa22.99■■□□□ 1.27
CACNA1A-257ENST00000638009 CBFA2T2O43439 604 aa22.98■■□□□ 1.27
CACNA1A-257ENST00000638009 TTLL5Q6EMB2 1281 aa22.98■■□□□ 1.27
CACNA1A-257ENST00000638009 HIP1O00291 1037 aa22.96■■□□□ 1.27
CACNA1A-257ENST00000638009 DZIP1LQ8IYY4 767 aaKnown RBP22.96■■□□□ 1.27
CACNA1A-257ENST00000638009 SKIDA1Q1XH10 827 aa22.95■■□□□ 1.27
CACNA1A-257ENST00000638009 TSPY26PQ9H489 355 aa22.95■■□□□ 1.26
CACNA1A-257ENST00000638009 CCDC192P0DO97 292 aa22.95■■□□□ 1.26
CACNA1A-257ENST00000638009 CALCOCO1Q9P1Z2 691 aa22.94■■□□□ 1.26
CACNA1A-257ENST00000638009 CRACR2AQ9BSW2 395 aa22.94■■□□□ 1.26
CACNA1A-257ENST00000638009 BAZ1BQ9UIG0 1483 aaKnown RBP22.94■■□□□ 1.26
CACNA1A-257ENST00000638009 POTEJP0CG39 1038 aa22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 TTC5Q8N0Z6 440 aa22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 G3BP1Q13283 466 aaKnown RBP eCLIP22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 CCDC9Q9Y3X0 531 aaKnown RBP22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 GIGYF2Q6Y7W6 1299 aaKnown RBP22.93■■□□□ 1.26
CACNA1A-257ENST00000638009 IMMTQ16891 758 aaKnown RBP22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 GCOM1H8Y6P7 765 aaPredicted RBP22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 MYZAPP0CAP1 466 aa22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 TNIKQ9UKE5 1360 aa22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 TSHZ2Q9NRE2 1034 aa22.92■■□□□ 1.26
CACNA1A-257ENST00000638009 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
CACNA1A-257ENST00000638009 EIF4G1Q04637 1599 aaKnown RBP22.91■■□□□ 1.26
CACNA1A-257ENST00000638009 TMCO3Q6UWJ1 677 aa22.91■■□□□ 1.26
CACNA1A-257ENST00000638009 PDCL3Q9H2J4 239 aa22.91■■□□□ 1.26
CACNA1A-257ENST00000638009 CLUAP1Q96AJ1 413 aa22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 SAFB2Q14151 953 aaKnown RBP eCLIP22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 ANAPC15P60006 121 aa22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 ZNF397Q8NF99 534 aaPredicted RBP22.9■■□□□ 1.26
CACNA1A-257ENST00000638009 CFAP45Q9UL16 551 aa22.89■■□□□ 1.26
CACNA1A-257ENST00000638009 ZBED9Q6R2W3 1325 aa22.89■■□□□ 1.26
CACNA1A-257ENST00000638009 NEBLO76041 1014 aa22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 ZWINTO95229 277 aa22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 KRT18P05783 430 aaKnown RBP22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 CCDC148Q8NFR7 591 aa22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 LRRFIP2Q9Y608 721 aaKnown RBP22.89■■□□□ 1.25
CACNA1A-257ENST00000638009 STK26Q9P289 416 aa22.88■■□□□ 1.25
CACNA1A-257ENST00000638009 TEFQ10587 303 aa22.88■■□□□ 1.25
CACNA1A-257ENST00000638009 DAAM2Q86T65 1068 aa22.88■■□□□ 1.25
CACNA1A-257ENST00000638009 SEPT6Q14141 434 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 FBXW7Q969H0 707 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 FYB1O15117 783 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 SERPINC1P01008 464 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 C6orf163Q5TEZ5 329 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 MYBBP1AQ9BQG0 1328 aaKnown RBP22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 RSPH4AQ5TD94 716 aa22.87■■□□□ 1.25
CACNA1A-257ENST00000638009 ANKRD1Q15327 319 aa22.86■■□□□ 1.25
CACNA1A-257ENST00000638009 SMC1AQ14683 1233 aaKnown RBP22.86■■□□□ 1.25
CACNA1A-257ENST00000638009 NGDNQ8NEJ9 315 aaKnown RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms