RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TNIKQ9UKE5 1360 aa21.6■■□□□ 1.05
CACNA1A-227ENST00000636549 LRRFIP1Q32MZ4 808 aaKnown RBP21.59■■□□□ 1.05
CACNA1A-227ENST00000636549 CALRP27797 417 aaKnown RBP21.59■■□□□ 1.05
CACNA1A-227ENST00000636549 KIF6Q6ZMV9 814 aa21.59■■□□□ 1.05
CACNA1A-227ENST00000636549 FAM69CQ0P6D2 419 aa21.58■■□□□ 1.05
CACNA1A-227ENST00000636549 CCDC85AQ96PX6 553 aaPredicted RBP21.58■■□□□ 1.05
CACNA1A-227ENST00000636549 XPCQ01831 940 aaPredicted RBP21.58■■□□□ 1.04
CACNA1A-227ENST00000636549 SAFBQ15424 915 aaKnown RBP eCLIP21.58■■□□□ 1.04
CACNA1A-227ENST00000636549 SEPT11Q9NVA2 429 aaKnown RBP21.58■■□□□ 1.04
CACNA1A-227ENST00000636549 ANKRD30AQ9BXX3 1397 aa21.58■■□□□ 1.04
CACNA1A-227ENST00000636549 CNNM1Q9NRU3 951 aa21.57■■□□□ 1.04
CACNA1A-227ENST00000636549 WWC3Q9ULE0 1092 aa21.57■■□□□ 1.04
CACNA1A-227ENST00000636549 MAP7D2Q96T17 732 aa21.57■■□□□ 1.04
CACNA1A-227ENST00000636549 FMNL2Q96PY5 1086 aa21.57■■□□□ 1.04
CACNA1A-227ENST00000636549 SIL1Q9H173 461 aa21.57■■□□□ 1.04
CACNA1A-227ENST00000636549 TTLL12Q14166 644 aaPredicted RBP21.56■■□□□ 1.04
CACNA1A-227ENST00000636549 RUFY2Q8WXA3 655 aa21.56■■□□□ 1.04
CACNA1A-227ENST00000636549 SASS6Q6UVJ0 657 aa21.56■■□□□ 1.04
CACNA1A-227ENST00000636549 HOOK1Q9UJC3 728 aaKnown RBP21.56■■□□□ 1.04
CACNA1A-227ENST00000636549 MYL6BP14649 208 aa21.56■■□□□ 1.04
CACNA1A-227ENST00000636549 PDCL3Q9H2J4 239 aa21.55■■□□□ 1.04
CACNA1A-227ENST00000636549 STK3Q13188 491 aa21.54■■□□□ 1.04
CACNA1A-227ENST00000636549 SMC3Q9UQE7 1217 aa21.54■■□□□ 1.04
CACNA1A-227ENST00000636549 SYCP1Q15431 976 aa21.54■■□□□ 1.04
CACNA1A-227ENST00000636549 BRMS1Q9HCU9 246 aa21.54■■□□□ 1.04
CACNA1A-227ENST00000636549 WDR78Q5VTH9 848 aa21.54■■□□□ 1.04
CACNA1A-227ENST00000636549 GPS2Q13227 327 aa21.54■■□□□ 1.04
CACNA1A-227ENST00000636549 IFT57Q9NWB7 429 aa21.54■■□□□ 1.04
CACNA1A-227ENST00000636549 TTC39AQ5SRH9 613 aa21.53■■□□□ 1.04
CACNA1A-227ENST00000636549 TRMT1LQ7Z2T5 733 aaKnown RBP21.53■■□□□ 1.04
CACNA1A-227ENST00000636549 CABP2Q9NPB3 220 aa21.53■■□□□ 1.04
CACNA1A-227ENST00000636549 NEBLO76041 1014 aa21.53■■□□□ 1.04
CACNA1A-227ENST00000636549 TIMELESSQ9UNS1 1208 aa21.52■■□□□ 1.04
CACNA1A-227ENST00000636549 EXOC6Q8TAG9 804 aa21.52■■□□□ 1.04
CACNA1A-227ENST00000636549 ABCC8Q09428 1581 aa21.51■■□□□ 1.03
CACNA1A-227ENST00000636549 ZKSCAN2Q63HK3 967 aa21.51■■□□□ 1.03
CACNA1A-227ENST00000636549 ABTB2Q8N961 1025 aa21.51■■□□□ 1.03
CACNA1A-227ENST00000636549 APAF1O14727 1248 aa21.51■■□□□ 1.03
CACNA1A-227ENST00000636549 DIAPH1O60610 1272 aaKnown RBP21.51■■□□□ 1.03
CACNA1A-227ENST00000636549 ST20-MTHFSA0A0A6YYL1 179 aa21.5■■□□□ 1.03
CACNA1A-227ENST00000636549 EVC2Q86UK5 1308 aa21.5■■□□□ 1.03
CACNA1A-227ENST00000636549 LNPKQ9C0E8 428 aa21.5■■□□□ 1.03
CACNA1A-227ENST00000636549 C1orf115Q9H7X2 142 aa21.5■■□□□ 1.03
CACNA1A-227ENST00000636549 FAM13BQ9NYF5 915 aa21.5■■□□□ 1.03
CACNA1A-227ENST00000636549 TANGO6Q9C0B7 1094 aa21.5■■□□□ 1.03
CACNA1A-227ENST00000636549 L3MBTL2Q969R5 705 aa21.49■■□□□ 1.03
CACNA1A-227ENST00000636549 FSD1Q9BTV5 496 aa21.49■■□□□ 1.03
CACNA1A-227ENST00000636549 PODXL2Q9NZ53 605 aa21.49■■□□□ 1.03
CACNA1A-227ENST00000636549 NUP133Q8WUM0 1156 aa21.49■■□□□ 1.03
CACNA1A-227ENST00000636549 CGNL1Q0VF96 1302 aa21.49■■□□□ 1.03
CACNA1A-227ENST00000636549 USP5P45974 858 aa21.48■■□□□ 1.03
CACNA1A-227ENST00000636549 OLFM4Q6UX06 510 aa21.48■■□□□ 1.03
CACNA1A-227ENST00000636549 TMEM87AQ8NBN3 555 aa21.48■■□□□ 1.03
CACNA1A-227ENST00000636549 GGNBP2Q9H3C7 697 aa21.48■■□□□ 1.03
CACNA1A-227ENST00000636549 SMC2O95347 1197 aa21.48■■□□□ 1.03
CACNA1A-227ENST00000636549 SSR1P43307 286 aaKnown RBP21.48■■□□□ 1.03
CACNA1A-227ENST00000636549 MPNDQ8N594 471 aa21.47■■□□□ 1.03
CACNA1A-227ENST00000636549 SSBP05455 408 aaKnown RBP eCLIP21.47■■□□□ 1.03
CACNA1A-227ENST00000636549 RNF20Q5VTR2 975 aa21.47■■□□□ 1.03
CACNA1A-227ENST00000636549 SCLT1Q96NL6 688 aa21.47■■□□□ 1.03
CACNA1A-227ENST00000636549 TOM1L2Q6ZVM7 507 aa21.46■■□□□ 1.03
CACNA1A-227ENST00000636549 DDX11L8A8MPP1 907 aa21.46■■□□□ 1.03
CACNA1A-227ENST00000636549 RAB3GAP2Q9H2M9 1393 aa21.46■■□□□ 1.03
CACNA1A-227ENST00000636549 NLRP6P59044 892 aa21.46■■□□□ 1.03
CACNA1A-227ENST00000636549 ATP6V1DQ9Y5K8 247 aa21.46■■□□□ 1.03
CACNA1A-227ENST00000636549 TMEM132EQ6IEE7 984 aa21.46■■□□□ 1.03
CACNA1A-227ENST00000636549 IPO9Q96P70 1041 aaKnown RBP21.45■■□□□ 1.02
CACNA1A-227ENST00000636549 SLC4A8Q2Y0W8 1093 aa21.45■■□□□ 1.02
CACNA1A-227ENST00000636549 LIG1P18858 919 aa21.45■■□□□ 1.02
CACNA1A-227ENST00000636549 HSP90AA2PQ14568 343 aaPredicted RBP21.44■■□□□ 1.02
CACNA1A-227ENST00000636549 RNF214Q8ND24 703 aa21.44■■□□□ 1.02
CACNA1A-227ENST00000636549 MNS1Q8NEH6 495 aa21.44■■□□□ 1.02
CACNA1A-227ENST00000636549 ENOX2Q16206 610 aaKnown RBP21.44■■□□□ 1.02
CACNA1A-227ENST00000636549 TBC1D2BQ9UPU7 963 aa21.43■■□□□ 1.02
CACNA1A-227ENST00000636549 CENPHQ9H3R5 247 aa21.42■■□□□ 1.02
CACNA1A-227ENST00000636549 PROSER2Q86WR7 435 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-227ENST00000636549 CCDC73Q6ZRK6 1079 aa21.42■■□□□ 1.02
CACNA1A-227ENST00000636549 E9PSI1 815 aa21.42■■□□□ 1.02
CACNA1A-227ENST00000636549 MAGEC2Q9UBF1 373 aaPredicted RBP21.42■■□□□ 1.02
CACNA1A-227ENST00000636549 FAM177A1Q8N128 213 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-227ENST00000636549 FHOD3Q2V2M9 1422 aa21.41■■□□□ 1.02
CACNA1A-227ENST00000636549 UBTFL1P0CB47 393 aaPredicted RBP21.41■■□□□ 1.02
CACNA1A-227ENST00000636549 CCDC173Q0VFZ6 552 aa21.41■■□□□ 1.02
CACNA1A-227ENST00000636549 XBP1P17861 261 aa21.4■■□□□ 1.02
CACNA1A-227ENST00000636549 ZNF76P36508 570 aa21.4■■□□□ 1.02
CACNA1A-227ENST00000636549 SEPT7Q16181 437 aaKnown RBP21.4■■□□□ 1.02
CACNA1A-227ENST00000636549 TAX1BP1Q86VP1 789 aa21.39■■□□□ 1.02
CACNA1A-227ENST00000636549 SPC24Q8NBT2 197 aa21.39■■□□□ 1.01
CACNA1A-227ENST00000636549 CCER2I3L3R5 266 aa21.39■■□□□ 1.01
CACNA1A-227ENST00000636549 CABP4P57796 275 aa21.39■■□□□ 1.01
CACNA1A-227ENST00000636549 SDF4Q9BRK5 362 aa21.38■■□□□ 1.01
CACNA1A-227ENST00000636549 FAM193AP78312 1265 aa21.38■■□□□ 1.01
CACNA1A-227ENST00000636549 JPH4Q96JJ6 628 aa21.38■■□□□ 1.01
CACNA1A-227ENST00000636549 FKBP4Q02790 459 aaKnown RBP eCLIP21.38■■□□□ 1.01
CACNA1A-227ENST00000636549 VGFO15240 615 aaPredicted RBP21.36■■□□□ 1.01
CACNA1A-227ENST00000636549 ADAMTS2O95450 1211 aa21.36■■□□□ 1.01
CACNA1A-227ENST00000636549 PANK1Q8TE04 598 aa21.36■■□□□ 1.01
CACNA1A-227ENST00000636549 SLC3A2P08195 630 aaKnown RBP21.36■■□□□ 1.01
CACNA1A-227ENST00000636549 TEX35Q5T0J7 233 aa21.36■■□□□ 1.01
CACNA1A-227ENST00000636549 ERC2O15083 957 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms