RNA–Protein interactions for RNA: ENST00000636400.2

TCF4-278, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,343 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-278ENST00000636400 RAPGEF4Q8WZA2 1011 aa8.31□□□□□ -1.08
TCF4-278ENST00000636400 VPS37DQ86XT2 251 aa8.3□□□□□ -1.08
TCF4-278ENST00000636400 TRIM34Q9BYJ4 488 aa8.3□□□□□ -1.08
TCF4-278ENST00000636400 CDK13Q14004 1512 aaKnown RBP8.3□□□□□ -1.08
TCF4-278ENST00000636400 TRIM29Q14134 588 aa8.3□□□□□ -1.08
TCF4-278ENST00000636400 INTS3Q68E01 1043 aaKnown RBP8.3□□□□□ -1.08
TCF4-278ENST00000636400 GAS2L2Q8NHY3 880 aa8.3□□□□□ -1.08
TCF4-278ENST00000636400 THEMISQ8N1K5 641 aaPredicted RBP8.3□□□□□ -1.08
TCF4-278ENST00000636400 ANKRD20A12PQ8NF67 263 aa8.3□□□□□ -1.08
TCF4-278ENST00000636400 IFIT2P09913 472 aaKnown RBP8.3□□□□□ -1.08
TCF4-278ENST00000636400 CEP89Q96ST8 783 aa8.3□□□□□ -1.08
TCF4-278ENST00000636400 KIF7Q2M1P5 1343 aa8.3□□□□□ -1.08
TCF4-278ENST00000636400 ZNF692Q9BU19 519 aaPredicted RBP8.3□□□□□ -1.08
TCF4-278ENST00000636400 ATAD2Q6PL18 1390 aa8.3□□□□□ -1.08
TCF4-278ENST00000636400 G3BP1Q13283 466 aaKnown RBP eCLIP8.29□□□□□ -1.08
TCF4-278ENST00000636400 HIP1O00291 1037 aa8.29□□□□□ -1.08
TCF4-278ENST00000636400 DEKP35659 375 aaKnown RBP8.29□□□□□ -1.08
TCF4-278ENST00000636400 RILPL2Q969X0 211 aa8.29□□□□□ -1.08
TCF4-278ENST00000636400 CCDC70Q6NSX1 233 aa8.29□□□□□ -1.08
TCF4-278ENST00000636400 TCEAL9Q9UHQ7 104 aa8.29□□□□□ -1.08
TCF4-278ENST00000636400 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
TCF4-278ENST00000636400 ERBINQ96RT1 1412 aa8.28□□□□□ -1.08
TCF4-278ENST00000636400 CCDC47Q96A33 483 aaKnown RBP8.28□□□□□ -1.08
TCF4-278ENST00000636400 ERICH2A1L162 156 aa8.28□□□□□ -1.08
TCF4-278ENST00000636400 MARCH6O60337 910 aa8.28□□□□□ -1.08
TCF4-278ENST00000636400 RRP7AQ9Y3A4 280 aaKnown RBP8.28□□□□□ -1.08
TCF4-278ENST00000636400 GCC2Q8IWJ2 1684 aa8.28□□□□□ -1.08
TCF4-278ENST00000636400 TPD52L1Q16890 204 aaPredicted RBP8.28□□□□□ -1.08
TCF4-278ENST00000636400 FKBP5Q13451 457 aaPredicted RBP8.27□□□□□ -1.08
TCF4-278ENST00000636400 NUTM2FA1L443 756 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 NUCB2P80303 420 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 ARHGEF11O15085 1522 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 MCM2P49736 904 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 CCDC30Q5VVM6 783 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 TOMM22Q9NS69 142 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 TSPYL4Q9UJ04 414 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 APAF1O14727 1248 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 ERC1Q8IUD2 1116 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 DUOX2Q9NRD8 1548 aa8.27□□□□□ -1.09
TCF4-278ENST00000636400 CPLX1O14810 134 aa8.26□□□□□ -1.09
TCF4-278ENST00000636400 AKNAQ7Z591 1439 aa8.26□□□□□ -1.09
TCF4-278ENST00000636400 ADGRL1O94910 1474 aa8.26□□□□□ -1.09
TCF4-278ENST00000636400 ZNF644Q9H582 1327 aaPredicted RBP8.26□□□□□ -1.09
TCF4-278ENST00000636400 IPO7O95373 1038 aaKnown RBP8.26□□□□□ -1.09
TCF4-278ENST00000636400 GNAI3P08754 354 aa8.26□□□□□ -1.09
TCF4-278ENST00000636400 PDIA4P13667 645 aaKnown RBP8.26□□□□□ -1.09
TCF4-278ENST00000636400 PSMA5P28066 241 aa8.26□□□□□ -1.09
TCF4-278ENST00000636400 MEX3CQ5U5Q3 659 aaKnown RBP8.26□□□□□ -1.09
TCF4-278ENST00000636400 PDCP20941 246 aa8.25□□□□□ -1.09
TCF4-278ENST00000636400 BECN2A8MW95 431 aa8.25□□□□□ -1.09
TCF4-278ENST00000636400 PDE4AP27815 886 aa8.25□□□□□ -1.09
TCF4-278ENST00000636400 SAFBQ15424 915 aaKnown RBP eCLIP8.25□□□□□ -1.09
TCF4-278ENST00000636400 GZF1Q9H116 711 aaPredicted RBP8.25□□□□□ -1.09
TCF4-278ENST00000636400 XBP1P17861 261 aa8.25□□□□□ -1.09
TCF4-278ENST00000636400 PNISRQ8TF01 805 aaKnown RBP8.25□□□□□ -1.09
TCF4-278ENST00000636400 FANCIQ9NVI1 1328 aa8.25□□□□□ -1.09
TCF4-278ENST00000636400 BRMS1Q9HCU9 246 aa8.25□□□□□ -1.09
TCF4-278ENST00000636400 NAT10Q9H0A0 1025 aaKnown RBP8.25□□□□□ -1.09
TCF4-278ENST00000636400 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.24□□□□□ -1.09
TCF4-278ENST00000636400 TSPOAP1O95153 1857 aa8.24□□□□□ -1.09
TCF4-278ENST00000636400 PLEKHO1Q53GL0 409 aaPredicted RBP8.24□□□□□ -1.09
TCF4-278ENST00000636400 CNTROBQ8N137 903 aa8.24□□□□□ -1.09
TCF4-278ENST00000636400 ABTB2Q8N961 1025 aa8.24□□□□□ -1.09
TCF4-278ENST00000636400 UBTFL1P0CB47 393 aaPredicted RBP8.24□□□□□ -1.09
TCF4-278ENST00000636400 PDE3AQ14432 1141 aa8.24□□□□□ -1.09
TCF4-278ENST00000636400 VPS53Q5VIR6 699 aa8.24□□□□□ -1.09
TCF4-278ENST00000636400 CRBNQ96SW2 442 aa8.24□□□□□ -1.09
TCF4-278ENST00000636400 GPS2Q13227 327 aa8.24□□□□□ -1.09
TCF4-278ENST00000636400 KIF6Q6ZMV9 814 aa8.24□□□□□ -1.09
TCF4-278ENST00000636400 RALYLQ86SE5 291 aaKnown RBP8.24□□□□□ -1.09
TCF4-278ENST00000636400 KDM5AP29375 1690 aaKnown RBP8.24□□□□□ -1.09
TCF4-278ENST00000636400 ADAMTS12P58397 1594 aa8.24□□□□□ -1.09
TCF4-278ENST00000636400 DHX16O60231 1041 aaKnown RBP8.24□□□□□ -1.09
TCF4-278ENST00000636400 TEX14Q8IWB6 1497 aa8.23□□□□□ -1.09
TCF4-278ENST00000636400 NAIPQ13075 1403 aa8.23□□□□□ -1.09
TCF4-278ENST00000636400 DHX8Q14562 1220 aaKnown RBP8.23□□□□□ -1.09
TCF4-278ENST00000636400 SART3Q15020 963 aaKnown RBP8.23□□□□□ -1.09
TCF4-278ENST00000636400 SLC3A2P08195 630 aaKnown RBP8.23□□□□□ -1.09
TCF4-278ENST00000636400 DDX49Q9Y6V7 483 aaKnown RBP8.23□□□□□ -1.09
TCF4-278ENST00000636400 KIAA0556O60303 1618 aa8.23□□□□□ -1.09
TCF4-278ENST00000636400 APPP05067 770 aa8.23□□□□□ -1.09
TCF4-278ENST00000636400 COG6Q9Y2V7 657 aa8.23□□□□□ -1.09
TCF4-278ENST00000636400 CTDP1Q9Y5B0 961 aaPredicted RBP8.23□□□□□ -1.09
TCF4-278ENST00000636400 ABCA5Q8WWZ7 1642 aa8.23□□□□□ -1.09
TCF4-278ENST00000636400 RTEL1-TNFRSF6BF6WH68 1400 aa8.23□□□□□ -1.09
TCF4-278ENST00000636400 EIF2S2P20042 333 aaKnown RBP8.23□□□□□ -1.09
TCF4-278ENST00000636400 A0A0U1RQG5 324 aaPredicted RBP8.23□□□□□ -1.09
TCF4-278ENST00000636400 RIC3Q7Z5B4 369 aa8.23□□□□□ -1.09
TCF4-278ENST00000636400 RBM33Q96EV2 1170 aaKnown RBP8.23□□□□□ -1.09
TCF4-278ENST00000636400 CCT4P50991 539 aaKnown RBP8.22□□□□□ -1.09
TCF4-278ENST00000636400 WDR63Q8IWG1 891 aa8.22□□□□□ -1.09
TCF4-278ENST00000636400 BCL2L13Q9BXK5 485 aa8.22□□□□□ -1.09
TCF4-278ENST00000636400 NLRP6P59044 892 aa8.22□□□□□ -1.09
TCF4-278ENST00000636400 PPP6R1Q9UPN7 881 aa8.22□□□□□ -1.09
TCF4-278ENST00000636400 CLASRPQ8N2M8 674 aaKnown RBP8.22□□□□□ -1.09
TCF4-278ENST00000636400 AFAP1Q8N556 730 aa8.22□□□□□ -1.09
TCF4-278ENST00000636400 CD109Q6YHK3 1445 aa8.22□□□□□ -1.09
TCF4-278ENST00000636400 SRCIN1Q9C0H9 1055 aa8.22□□□□□ -1.09
TCF4-278ENST00000636400 DNMT1P26358 1616 aaKnown RBP8.22□□□□□ -1.09
TCF4-278ENST00000636400 MCTP1Q6DN14 999 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms