RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 TONSLQ96HA7 1378 aa24.47■■□□□ 1.51
LIN28B-202ENST00000635857 TRAK1Q9UPV9 953 aa24.46■■□□□ 1.51
LIN28B-202ENST00000635857 PLEKHH1Q9ULM0 1364 aa24.44■■□□□ 1.5
LIN28B-202ENST00000635857 PRAM1Q96QH2 718 aa24.44■■□□□ 1.5
LIN28B-202ENST00000635857 SAFB2Q14151 953 aaKnown RBP eCLIP24.42■■□□□ 1.5
LIN28B-202ENST00000635857 BRINP3Q76B58 766 aa24.42■■□□□ 1.5
LIN28B-202ENST00000635857 C1orf167Q5SNV9 1468 aa24.42■■□□□ 1.5
LIN28B-202ENST00000635857 AHDC1Q5TGY3 1603 aaPredicted RBP24.4■■□□□ 1.5
LIN28B-202ENST00000635857 ARHGEF28Q8N1W1 1705 aaKnown RBP24.39■■□□□ 1.5
LIN28B-202ENST00000635857 FMN2Q9NZ56 1722 aa24.38■■□□□ 1.49
LIN28B-202ENST00000635857 TRPM1Q7Z4N2 1603 aa24.36■■□□□ 1.49
LIN28B-202ENST00000635857 COL16A1Q07092 1604 aaPredicted RBP24.35■■□□□ 1.49
LIN28B-202ENST00000635857 NHSL1Q5SYE7 1610 aa24.35■■□□□ 1.49
LIN28B-202ENST00000635857 ADGRB2O60241 1585 aa24.34■■□□□ 1.49
LIN28B-202ENST00000635857 ESCO1Q5FWF5 840 aa24.34■■□□□ 1.49
LIN28B-202ENST00000635857 ROCK2O75116 1388 aaKnown RBP24.33■■□□□ 1.49
LIN28B-202ENST00000635857 EIF3AQ14152 1382 aaKnown RBP24.33■■□□□ 1.49
LIN28B-202ENST00000635857 NUTM2FA1L443 756 aa24.33■■□□□ 1.49
LIN28B-202ENST00000635857 NBPF1Q3BBV0 1214 aa24.33■■□□□ 1.49
LIN28B-202ENST00000635857 CLSPNQ9HAW4 1339 aa24.33■■□□□ 1.48
LIN28B-202ENST00000635857 JCADQ9P266 1359 aa24.32■■□□□ 1.48
LIN28B-202ENST00000635857 DISP3Q9P2K9 1392 aa24.32■■□□□ 1.48
LIN28B-202ENST00000635857 MED1Q15648 1581 aaPredicted RBP24.32■■□□□ 1.48
LIN28B-202ENST00000635857 MINK1Q8N4C8 1332 aaPredicted RBP24.32■■□□□ 1.48
LIN28B-202ENST00000635857 ORAI2Q96SN7 254 aa24.31■■□□□ 1.48
LIN28B-202ENST00000635857 HIRIP3Q9BW71 556 aaPredicted RBP24.3■■□□□ 1.48
LIN28B-202ENST00000635857 KIF1AQ12756 1690 aa24.3■■□□□ 1.48
LIN28B-202ENST00000635857 CCER1Q8TC90 406 aaPredicted RBP24.27■■□□□ 1.48
LIN28B-202ENST00000635857 NPHP3Q7Z494 1330 aa24.27■■□□□ 1.48
LIN28B-202ENST00000635857 LRRC59Q96AG4 307 aaKnown RBP24.26■■□□□ 1.47
LIN28B-202ENST00000635857 PHF23Q9BUL5 403 aaPredicted RBP24.26■■□□□ 1.47
LIN28B-202ENST00000635857 SHPRHQ149N8 1683 aa24.26■■□□□ 1.47
LIN28B-202ENST00000635857 ANKARQ7Z5J8 1434 aa24.26■■□□□ 1.47
LIN28B-202ENST00000635857 CENPJQ9HC77 1338 aaPredicted RBP24.25■■□□□ 1.47
LIN28B-202ENST00000635857 TULP4Q9NRJ4 1543 aa24.24■■□□□ 1.47
LIN28B-202ENST00000635857 RGPD8O14715 1765 aaPredicted RBP24.24■■□□□ 1.47
LIN28B-202ENST00000635857 WASLO00401 505 aaPredicted RBP24.23■■□□□ 1.47
LIN28B-202ENST00000635857 DDX17Q92841 729 aaKnown RBP24.23■■□□□ 1.47
LIN28B-202ENST00000635857 QRICH2Q9H0J4 1663 aa24.23■■□□□ 1.47
LIN28B-202ENST00000635857 SPATA31A6Q5VVP1 1343 aa24.22■■□□□ 1.47
LIN28B-202ENST00000635857 NBPF8Q3BBV2 869 aa24.22■■□□□ 1.47
LIN28B-202ENST00000635857 RALGAPBQ86X10 1494 aa24.21■■□□□ 1.47
LIN28B-202ENST00000635857 PHF8Q9UPP1 1060 aa24.21■■□□□ 1.47
LIN28B-202ENST00000635857 ITSN1Q15811 1721 aa24.21■■□□□ 1.47
LIN28B-202ENST00000635857 FOXO3O43524 673 aa24.2■■□□□ 1.46
LIN28B-202ENST00000635857 CARD11Q9BXL7 1154 aa24.2■■□□□ 1.46
LIN28B-202ENST00000635857 TIMELESSQ9UNS1 1208 aa24.19■■□□□ 1.46
LIN28B-202ENST00000635857 GPRASP1Q5JY77 1395 aa24.18■■□□□ 1.46
LIN28B-202ENST00000635857 USP32Q8NFA0 1604 aa24.18■■□□□ 1.46
LIN28B-202ENST00000635857 SOS2Q07890 1332 aaPredicted RBP24.18■■□□□ 1.46
LIN28B-202ENST00000635857 MEX3CQ5U5Q3 659 aaKnown RBP24.17■■□□□ 1.46
LIN28B-202ENST00000635857 PXDNQ92626 1479 aa24.15■■□□□ 1.46
LIN28B-202ENST00000635857 CDK19Q9BWU1 502 aa24.15■■□□□ 1.46
LIN28B-202ENST00000635857 SRPK2P78362 688 aaKnown RBP24.14■■□□□ 1.45
LIN28B-202ENST00000635857 XPCQ01831 940 aaPredicted RBP24.14■■□□□ 1.45
LIN28B-202ENST00000635857 PSME1Q06323 249 aa24.14■■□□□ 1.45
LIN28B-202ENST00000635857 PNPLA6Q8IY17 1366 aa24.14■■□□□ 1.45
LIN28B-202ENST00000635857 PMFBP1Q8TBY8 1022 aa24.13■■□□□ 1.45
LIN28B-202ENST00000635857 ATP7BP35670 1465 aa24.13■■□□□ 1.45
LIN28B-202ENST00000635857 NUTM2BA6NNL0 878 aaPredicted RBP24.12■■□□□ 1.45
LIN28B-202ENST00000635857 NUTM2EB1AL46 878 aaPredicted RBP24.12■■□□□ 1.45
LIN28B-202ENST00000635857 NUTM2AQ8IVF1 878 aaPredicted RBP24.12■■□□□ 1.45
LIN28B-202ENST00000635857 KRT28Q7Z3Y7 464 aa24.11■■□□□ 1.45
LIN28B-202ENST00000635857 NUDT16Q96DE0 195 aaKnown RBP24.11■■□□□ 1.45
LIN28B-202ENST00000635857 EVC2Q86UK5 1308 aa24.1■■□□□ 1.45
LIN28B-202ENST00000635857 PRR36Q9H6K5 1346 aa24.1■■□□□ 1.45
LIN28B-202ENST00000635857 NGDNQ8NEJ9 315 aaKnown RBP24.1■■□□□ 1.45
LIN28B-202ENST00000635857 TOPAZ1Q8N9V7 1692 aa24.08■■□□□ 1.44
LIN28B-202ENST00000635857 LRP6O75581 1613 aa24.07■■□□□ 1.44
LIN28B-202ENST00000635857 COL22A1Q8NFW1 1626 aaPredicted RBP24.07■■□□□ 1.44
LIN28B-202ENST00000635857 CCDC61Q9Y6R9 512 aa24.07■■□□□ 1.44
LIN28B-202ENST00000635857 TNS3Q68CZ2 1445 aa24.06■■□□□ 1.44
LIN28B-202ENST00000635857 LMOD2Q6P5Q4 547 aa24.05■■□□□ 1.44
LIN28B-202ENST00000635857 SBNO1A3KN83 1393 aa24.04■■□□□ 1.44
LIN28B-202ENST00000635857 CABP2Q9NPB3 220 aa24.04■■□□□ 1.44
LIN28B-202ENST00000635857 SPATA31A3Q5VYP0 1347 aa24.04■■□□□ 1.44
LIN28B-202ENST00000635857 SBNO2Q9Y2G9 1366 aa24.03■■□□□ 1.44
LIN28B-202ENST00000635857 ARHGEF10O15013 1369 aa24.03■■□□□ 1.44
LIN28B-202ENST00000635857 PPIP5K1Q6PFW1 1433 aa24.02■■□□□ 1.44
LIN28B-202ENST00000635857 HAP1P54257 671 aaPredicted RBP24.02■■□□□ 1.44
LIN28B-202ENST00000635857 PAK3O75914 559 aaPredicted RBP24■■□□□ 1.43
LIN28B-202ENST00000635857 TRPM3Q9HCF6 1732 aaPredicted RBP23.99■■□□□ 1.43
LIN28B-202ENST00000635857 SLC24A1O60721 1099 aa23.99■■□□□ 1.43
LIN28B-202ENST00000635857 ADAMTS2O95450 1211 aa23.99■■□□□ 1.43
LIN28B-202ENST00000635857 C8orf37Q96NL8 207 aa23.98■■□□□ 1.43
LIN28B-202ENST00000635857 ACEP12821 1306 aa23.98■■□□□ 1.43
LIN28B-202ENST00000635857 ATAD2Q6PL18 1390 aa23.98■■□□□ 1.43
LIN28B-202ENST00000635857 PLEKHG3A1L390 1219 aa23.97■■□□□ 1.43
LIN28B-202ENST00000635857 POLR3AO14802 1390 aaPredicted RBP23.97■■□□□ 1.43
LIN28B-202ENST00000635857 ZNF772Q68DY9 489 aaPredicted RBP23.97■■□□□ 1.43
LIN28B-202ENST00000635857 USP47Q96K76 1375 aa23.96■■□□□ 1.43
LIN28B-202ENST00000635857 MARF1Q9Y4F3 1742 aaKnown RBP23.94■■□□□ 1.42
LIN28B-202ENST00000635857 ST20-MTHFSA0A0A6YYL1 179 aa23.94■■□□□ 1.42
LIN28B-202ENST00000635857 PLEKHG5O94827 1062 aa23.94■■□□□ 1.42
LIN28B-202ENST00000635857 NGLY1Q96IV0 654 aa23.94■■□□□ 1.42
LIN28B-202ENST00000635857 ALS2Q96Q42 1657 aa23.94■■□□□ 1.42
LIN28B-202ENST00000635857 CABP1Q9NZU7 370 aa23.93■■□□□ 1.42
LIN28B-202ENST00000635857 AFF2P51816 1311 aa23.92■■□□□ 1.42
LIN28B-202ENST00000635857 ILDR2Q71H61 639 aa23.91■■□□□ 1.42
LIN28B-202ENST00000635857 RGS17Q9UGC6 210 aaPredicted RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms