RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 KDM2AQ9Y2K7 1162 aa26.88■■□□□ 1.89
PNKP-224ENST00000631020 C1orf167Q5SNV9 1468 aa26.87■■□□□ 1.89
PNKP-224ENST00000631020 CDC42BPGQ6DT37 1551 aa26.87■■□□□ 1.89
PNKP-224ENST00000631020 RGS17Q9UGC6 210 aaPredicted RBP26.85■■□□□ 1.89
PNKP-224ENST00000631020 TONSLQ96HA7 1378 aa26.85■■□□□ 1.89
PNKP-224ENST00000631020 C14orf93Q9H972 538 aaKnown RBP26.85■■□□□ 1.89
PNKP-224ENST00000631020 YTHDC2Q9H6S0 1430 aaKnown RBP26.83■■□□□ 1.89
PNKP-224ENST00000631020 SIRT1Q96EB6 747 aa26.81■■□□□ 1.88
PNKP-224ENST00000631020 STAC3Q96MF2 364 aa26.81■■□□□ 1.88
PNKP-224ENST00000631020 TMEM132EQ6IEE7 984 aa26.8■■□□□ 1.88
PNKP-224ENST00000631020 LRRC59Q96AG4 307 aaKnown RBP26.79■■□□□ 1.88
PNKP-224ENST00000631020 STK26Q9P289 416 aa26.79■■□□□ 1.88
PNKP-224ENST00000631020 TIMELESSQ9UNS1 1208 aa26.78■■□□□ 1.88
PNKP-224ENST00000631020 LRP6O75581 1613 aa26.78■■□□□ 1.88
PNKP-224ENST00000631020 CFAP70Q5T0N1 1121 aa26.75■■□□□ 1.87
PNKP-224ENST00000631020 WAPLQ7Z5K2 1190 aa26.75■■□□□ 1.87
PNKP-224ENST00000631020 ORAI2Q96SN7 254 aa26.73■■□□□ 1.87
PNKP-224ENST00000631020 DLC1Q96QB1 1528 aa26.72■■□□□ 1.87
PNKP-224ENST00000631020 SOS2Q07890 1332 aaPredicted RBP26.72■■□□□ 1.87
PNKP-224ENST00000631020 PLEKHH1Q9ULM0 1364 aa26.72■■□□□ 1.87
PNKP-224ENST00000631020 FMN2Q9NZ56 1722 aa26.71■■□□□ 1.87
PNKP-224ENST00000631020 NBPF8Q3BBV2 869 aa26.71■■□□□ 1.87
PNKP-224ENST00000631020 ADGRB1O14514 1584 aa26.71■■□□□ 1.87
PNKP-224ENST00000631020 PNPLA6Q8IY17 1366 aa26.7■■□□□ 1.86
PNKP-224ENST00000631020 POTEAQ6S8J7 498 aa26.7■■□□□ 1.86
PNKP-224ENST00000631020 DDX17Q92841 729 aaKnown RBP26.7■■□□□ 1.86
PNKP-224ENST00000631020 MEX3CQ5U5Q3 659 aaKnown RBP26.68■■□□□ 1.86
PNKP-224ENST00000631020 NPHP3Q7Z494 1330 aa26.66■■□□□ 1.86
PNKP-224ENST00000631020 ESCO1Q5FWF5 840 aa26.65■■□□□ 1.86
PNKP-224ENST00000631020 ZNF772Q68DY9 489 aaPredicted RBP26.65■■□□□ 1.86
PNKP-224ENST00000631020 KIF1AQ12756 1690 aa26.64■■□□□ 1.86
PNKP-224ENST00000631020 COL22A1Q8NFW1 1626 aaPredicted RBP26.63■■□□□ 1.85
PNKP-224ENST00000631020 NBPF1Q3BBV0 1214 aa26.62■■□□□ 1.85
PNKP-224ENST00000631020 ADGRB2O60241 1585 aa26.62■■□□□ 1.85
PNKP-224ENST00000631020 PXDNQ92626 1479 aa26.62■■□□□ 1.85
PNKP-224ENST00000631020 NUTM2BA6NNL0 878 aaPredicted RBP26.61■■□□□ 1.85
PNKP-224ENST00000631020 NUTM2EB1AL46 878 aaPredicted RBP26.61■■□□□ 1.85
PNKP-224ENST00000631020 NUTM2AQ8IVF1 878 aaPredicted RBP26.61■■□□□ 1.85
PNKP-224ENST00000631020 PRAM1Q96QH2 718 aa26.61■■□□□ 1.85
PNKP-224ENST00000631020 KIAA1210Q9ULL0 1709 aa26.58■■□□□ 1.85
PNKP-224ENST00000631020 POGKQ9P215 609 aa26.57■■□□□ 1.84
PNKP-224ENST00000631020 RGPD8O14715 1765 aaPredicted RBP26.56■■□□□ 1.84
PNKP-224ENST00000631020 FOXO3O43524 673 aa26.56■■□□□ 1.84
PNKP-224ENST00000631020 TRPM1Q7Z4N2 1603 aa26.55■■□□□ 1.84
PNKP-224ENST00000631020 NUTM2FA1L443 756 aa26.55■■□□□ 1.84
PNKP-224ENST00000631020 ANKARQ7Z5J8 1434 aa26.55■■□□□ 1.84
PNKP-224ENST00000631020 TRAK1Q9UPV9 953 aa26.54■■□□□ 1.84
PNKP-224ENST00000631020 ARHGEF28Q8N1W1 1705 aaKnown RBP26.52■■□□□ 1.84
PNKP-224ENST00000631020 AFF2P51816 1311 aa26.52■■□□□ 1.84
PNKP-224ENST00000631020 SAFB2Q14151 953 aaKnown RBP eCLIP26.51■■□□□ 1.83
PNKP-224ENST00000631020 EIF3AQ14152 1382 aaKnown RBP26.51■■□□□ 1.83
PNKP-224ENST00000631020 RALGAPBQ86X10 1494 aa26.5■■□□□ 1.83
PNKP-224ENST00000631020 ROCK2O75116 1388 aaKnown RBP26.5■■□□□ 1.83
PNKP-224ENST00000631020 USP32Q8NFA0 1604 aa26.5■■□□□ 1.83
PNKP-224ENST00000631020 C8orf37Q96NL8 207 aa26.49■■□□□ 1.83
PNKP-224ENST00000631020 PHF8Q9UPP1 1060 aa26.49■■□□□ 1.83
PNKP-224ENST00000631020 CDK12Q9NYV4 1490 aaPredicted RBP26.48■■□□□ 1.83
PNKP-224ENST00000631020 GPRASP1Q5JY77 1395 aa26.48■■□□□ 1.83
PNKP-224ENST00000631020 MARF1Q9Y4F3 1742 aaKnown RBP26.47■■□□□ 1.83
PNKP-224ENST00000631020 XPCQ01831 940 aaPredicted RBP26.46■■□□□ 1.83
PNKP-224ENST00000631020 SPATA31A3Q5VYP0 1347 aa26.46■■□□□ 1.83
PNKP-224ENST00000631020 RXRBP28702 533 aa26.45■■□□□ 1.83
PNKP-224ENST00000631020 TULP4Q9NRJ4 1543 aa26.45■■□□□ 1.82
PNKP-224ENST00000631020 ADAMTS2O95450 1211 aa26.44■■□□□ 1.82
PNKP-224ENST00000631020 KRT28Q7Z3Y7 464 aa26.44■■□□□ 1.82
PNKP-224ENST00000631020 PSME1Q06323 249 aa26.44■■□□□ 1.82
PNKP-224ENST00000631020 NGLY1Q96IV0 654 aa26.44■■□□□ 1.82
PNKP-224ENST00000631020 CARD11Q9BXL7 1154 aa26.44■■□□□ 1.82
PNKP-224ENST00000631020 SBNO1A3KN83 1393 aa26.42■■□□□ 1.82
PNKP-224ENST00000631020 MINK1Q8N4C8 1332 aaPredicted RBP26.42■■□□□ 1.82
PNKP-224ENST00000631020 WASLO00401 505 aaPredicted RBP26.42■■□□□ 1.82
PNKP-224ENST00000631020 TNS3Q68CZ2 1445 aa26.41■■□□□ 1.82
PNKP-224ENST00000631020 FNBP4Q8N3X1 1017 aaPredicted RBP26.41■■□□□ 1.82
PNKP-224ENST00000631020 HIRIP3Q9BW71 556 aaPredicted RBP26.4■■□□□ 1.82
PNKP-224ENST00000631020 ZEB1P37275 1124 aaPredicted RBP26.39■■□□□ 1.82
PNKP-224ENST00000631020 ITSN1Q15811 1721 aa26.39■■□□□ 1.81
PNKP-224ENST00000631020 QTRT2Q9H974 415 aaKnown RBP26.39■■□□□ 1.81
PNKP-224ENST00000631020 RBM6P78332 1123 aaKnown RBP26.38■■□□□ 1.81
PNKP-224ENST00000631020 PRR36Q9H6K5 1346 aa26.36■■□□□ 1.81
PNKP-224ENST00000631020 ARHGEF10O15013 1369 aa26.36■■□□□ 1.81
PNKP-224ENST00000631020 USP21Q9UK80 565 aa26.35■■□□□ 1.81
PNKP-224ENST00000631020 TRPM3Q9HCF6 1732 aaPredicted RBP26.35■■□□□ 1.81
PNKP-224ENST00000631020 PMFBP1Q8TBY8 1022 aa26.34■■□□□ 1.81
PNKP-224ENST00000631020 ATP7BP35670 1465 aa26.34■■□□□ 1.81
PNKP-224ENST00000631020 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.33■■□□□ 1.81
PNKP-224ENST00000631020 TRPC5Q9UL62 973 aaPredicted RBP26.33■■□□□ 1.81
PNKP-224ENST00000631020 ABCA3Q99758 1704 aa26.32■■□□□ 1.8
PNKP-224ENST00000631020 ATRNO75882 1429 aa26.32■■□□□ 1.8
PNKP-224ENST00000631020 BCL9LQ86UU0 1499 aa26.31■■□□□ 1.8
PNKP-224ENST00000631020 ALS2Q96Q42 1657 aa26.3■■□□□ 1.8
PNKP-224ENST00000631020 RGS12O14924 1447 aa26.29■■□□□ 1.8
PNKP-224ENST00000631020 TOPAZ1Q8N9V7 1692 aa26.29■■□□□ 1.8
PNKP-224ENST00000631020 SLIT2O94813 1529 aa26.28■■□□□ 1.8
PNKP-224ENST00000631020 USP47Q96K76 1375 aa26.28■■□□□ 1.8
PNKP-224ENST00000631020 NUDT16Q96DE0 195 aaKnown RBP26.28■■□□□ 1.8
PNKP-224ENST00000631020 CENPJQ9HC77 1338 aaPredicted RBP26.28■■□□□ 1.8
PNKP-224ENST00000631020 CDK19Q9BWU1 502 aa26.27■■□□□ 1.8
PNKP-224ENST00000631020 ST20-MTHFSA0A0A6YYL1 179 aa26.25■■□□□ 1.79
PNKP-224ENST00000631020 NGDNQ8NEJ9 315 aaKnown RBP26.25■■□□□ 1.79
PNKP-224ENST00000631020 QRICH2Q9H0J4 1663 aa26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms