RNA–Protein interactions for RNA: ENST00000630622.1

CDC42EP4-209, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 240 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-209ENST00000630622 USP47Q96K76 1375 aa23.56■■□□□ 1.36
CDC42EP4-209ENST00000630622 SAFB2Q14151 953 aaKnown RBP eCLIP23.56■■□□□ 1.36
CDC42EP4-209ENST00000630622 ADGRB2O60241 1585 aa23.56■■□□□ 1.36
CDC42EP4-209ENST00000630622 CENPJQ9HC77 1338 aaPredicted RBP23.56■■□□□ 1.36
CDC42EP4-209ENST00000630622 C19orf44Q9H6X5 657 aa23.54■■□□□ 1.36
CDC42EP4-209ENST00000630622 MSH6P52701 1360 aa23.53■■□□□ 1.36
CDC42EP4-209ENST00000630622 CDC42BPGQ6DT37 1551 aa23.53■■□□□ 1.36
CDC42EP4-209ENST00000630622 DCCP43146 1447 aa23.53■■□□□ 1.36
CDC42EP4-209ENST00000630622 C14orf37Q86TY3 774 aa23.53■■□□□ 1.36
CDC42EP4-209ENST00000630622 MINK1Q8N4C8 1332 aaPredicted RBP23.51■■□□□ 1.35
CDC42EP4-209ENST00000630622 SBNO2Q9Y2G9 1366 aa23.5■■□□□ 1.35
CDC42EP4-209ENST00000630622 ST20-MTHFSA0A0A6YYL1 179 aa23.49■■□□□ 1.35
CDC42EP4-209ENST00000630622 FMN2Q9NZ56 1722 aa23.49■■□□□ 1.35
CDC42EP4-209ENST00000630622 HIRIP3Q9BW71 556 aaPredicted RBP23.48■■□□□ 1.35
CDC42EP4-209ENST00000630622 EIF4G2P78344 907 aaKnown RBP eCLIP23.46■■□□□ 1.35
CDC42EP4-209ENST00000630622 TESK2Q96S53 571 aa23.46■■□□□ 1.35
CDC42EP4-209ENST00000630622 TULP4Q9NRJ4 1543 aa23.46■■□□□ 1.35
CDC42EP4-209ENST00000630622 ATF3P18847 181 aa23.45■■□□□ 1.34
CDC42EP4-209ENST00000630622 CADPS2Q86UW7 1296 aa23.45■■□□□ 1.34
CDC42EP4-209ENST00000630622 HSPA5P11021 654 aaKnown RBP23.44■■□□□ 1.34
CDC42EP4-209ENST00000630622 MST1RQ04912 1400 aa23.43■■□□□ 1.34
CDC42EP4-209ENST00000630622 WASLO00401 505 aaPredicted RBP23.43■■□□□ 1.34
CDC42EP4-209ENST00000630622 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
CDC42EP4-209ENST00000630622 RGPD8O14715 1765 aaPredicted RBP23.4■■□□□ 1.34
CDC42EP4-209ENST00000630622 UBAP1LF5GYI3 381 aa23.39■■□□□ 1.33
CDC42EP4-209ENST00000630622 CDK19Q9BWU1 502 aa23.39■■□□□ 1.33
CDC42EP4-209ENST00000630622 EVC2Q86UK5 1308 aa23.38■■□□□ 1.33
CDC42EP4-209ENST00000630622 C1orf167Q5SNV9 1468 aa23.38■■□□□ 1.33
CDC42EP4-209ENST00000630622 TOM1O60784 492 aa23.38■■□□□ 1.33
CDC42EP4-209ENST00000630622 SLAIN2Q9P270 581 aa23.38■■□□□ 1.33
CDC42EP4-209ENST00000630622 ANKARQ7Z5J8 1434 aa23.37■■□□□ 1.33
CDC42EP4-209ENST00000630622 ATP7BP35670 1465 aa23.36■■□□□ 1.33
CDC42EP4-209ENST00000630622 PRR36Q9H6K5 1346 aa23.36■■□□□ 1.33
CDC42EP4-209ENST00000630622 NUTM2FA1L443 756 aa23.35■■□□□ 1.33
CDC42EP4-209ENST00000630622 DISP3Q9P2K9 1392 aa23.35■■□□□ 1.33
CDC42EP4-209ENST00000630622 TOPAZ1Q8N9V7 1692 aa23.35■■□□□ 1.33
CDC42EP4-209ENST00000630622 SLC24A1O60721 1099 aa23.34■■□□□ 1.33
CDC42EP4-209ENST00000630622 ITSN1Q15811 1721 aa23.33■■□□□ 1.33
CDC42EP4-209ENST00000630622 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.33
CDC42EP4-209ENST00000630622 CABP2Q9NPB3 220 aa23.33■■□□□ 1.33
CDC42EP4-209ENST00000630622 SRPK2P78362 688 aaKnown RBP23.32■■□□□ 1.32
CDC42EP4-209ENST00000630622 TMF1P82094 1093 aa23.31■■□□□ 1.32
CDC42EP4-209ENST00000630622 NUDT16Q96DE0 195 aaKnown RBP23.31■■□□□ 1.32
CDC42EP4-209ENST00000630622 BRINP3Q76B58 766 aa23.29■■□□□ 1.32
CDC42EP4-209ENST00000630622 PUS7Q96PZ0 661 aaKnown RBP23.29■■□□□ 1.32
CDC42EP4-209ENST00000630622 ORAI2Q96SN7 254 aa23.29■■□□□ 1.32
CDC42EP4-209ENST00000630622 KIF1AQ12756 1690 aa23.28■■□□□ 1.32
CDC42EP4-209ENST00000630622 PIP4K2BP78356 416 aa23.28■■□□□ 1.32
CDC42EP4-209ENST00000630622 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.32
CDC42EP4-209ENST00000630622 ESCO1Q5FWF5 840 aa23.27■■□□□ 1.32
CDC42EP4-209ENST00000630622 CCDC61Q9Y6R9 512 aa23.26■■□□□ 1.31
CDC42EP4-209ENST00000630622 NHSL1Q5SYE7 1610 aa23.26■■□□□ 1.31
CDC42EP4-209ENST00000630622 C11orf95C9JLR9 678 aaPredicted RBP23.25■■□□□ 1.31
CDC42EP4-209ENST00000630622 PHF8Q9UPP1 1060 aa23.24■■□□□ 1.31
CDC42EP4-209ENST00000630622 PPIP5K1Q6PFW1 1433 aa23.24■■□□□ 1.31
CDC42EP4-209ENST00000630622 CDCA8Q53HL2 280 aa23.23■■□□□ 1.31
CDC42EP4-209ENST00000630622 FBXO41Q8TF61 875 aa23.23■■□□□ 1.31
CDC42EP4-209ENST00000630622 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
CDC42EP4-209ENST00000630622 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
CDC42EP4-209ENST00000630622 MYOM1P52179 1685 aa23.22■■□□□ 1.31
CDC42EP4-209ENST00000630622 PLEKHG3A1L390 1219 aa23.21■■□□□ 1.31
CDC42EP4-209ENST00000630622 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
CDC42EP4-209ENST00000630622 CABP1Q9NZU7 370 aa23.2■■□□□ 1.3
CDC42EP4-209ENST00000630622 POLR3AO14802 1390 aaPredicted RBP23.19■■□□□ 1.3
CDC42EP4-209ENST00000630622 AKAP12Q02952 1782 aa23.18■■□□□ 1.3
CDC42EP4-209ENST00000630622 NINLQ9Y2I6 1382 aa23.17■■□□□ 1.3
CDC42EP4-209ENST00000630622 PHLPP1O60346 1717 aa23.17■■□□□ 1.3
CDC42EP4-209ENST00000630622 KIF7Q2M1P5 1343 aa23.17■■□□□ 1.3
CDC42EP4-209ENST00000630622 FOXO3O43524 673 aa23.17■■□□□ 1.3
CDC42EP4-209ENST00000630622 DDX17Q92841 729 aaKnown RBP23.17■■□□□ 1.3
CDC42EP4-209ENST00000630622 PXDNQ92626 1479 aa23.17■■□□□ 1.3
CDC42EP4-209ENST00000630622 CD163L1Q9NR16 1453 aa23.17■■□□□ 1.3
CDC42EP4-209ENST00000630622 ACEP12821 1306 aa23.16■■□□□ 1.3
CDC42EP4-209ENST00000630622 SLC12A5Q9H2X9 1139 aa23.16■■□□□ 1.3
CDC42EP4-209ENST00000630622 COL16A1Q07092 1604 aaPredicted RBP23.15■■□□□ 1.3
CDC42EP4-209ENST00000630622 NPHP3Q7Z494 1330 aa23.15■■□□□ 1.3
CDC42EP4-209ENST00000630622 CCDC7Q96M83 1385 aa23.14■■□□□ 1.3
CDC42EP4-209ENST00000630622 TRPM3Q9HCF6 1732 aaPredicted RBP23.14■■□□□ 1.3
CDC42EP4-209ENST00000630622 NGDNQ8NEJ9 315 aaKnown RBP23.14■■□□□ 1.29
CDC42EP4-209ENST00000630622 TMC1Q8TDI8 760 aa23.14■■□□□ 1.29
CDC42EP4-209ENST00000630622 CPSF1Q10570 1443 aaKnown RBP23.14■■□□□ 1.29
CDC42EP4-209ENST00000630622 SOS2Q07890 1332 aaPredicted RBP23.13■■□□□ 1.29
CDC42EP4-209ENST00000630622 WASHC2AQ641Q2 1341 aa23.13■■□□□ 1.29
CDC42EP4-209ENST00000630622 MON2Q7Z3U7 1717 aa23.13■■□□□ 1.29
CDC42EP4-209ENST00000630622 POLR3GLQ9BT43 218 aa23.12■■□□□ 1.29
CDC42EP4-209ENST00000630622 HSPA1LP34931 641 aa23.1■■□□□ 1.29
CDC42EP4-209ENST00000630622 XPCQ01831 940 aaPredicted RBP23.1■■□□□ 1.29
CDC42EP4-209ENST00000630622 NRKQ7Z2Y5 1582 aa23.1■■□□□ 1.29
CDC42EP4-209ENST00000630622 USP6P35125 1406 aa23.09■■□□□ 1.29
CDC42EP4-209ENST00000630622 PSME1Q06323 249 aa23.09■■□□□ 1.29
CDC42EP4-209ENST00000630622 KRT28Q7Z3Y7 464 aa23.09■■□□□ 1.29
CDC42EP4-209ENST00000630622 A0A1W2PP64 1363 aa23.09■■□□□ 1.29
CDC42EP4-209ENST00000630622 ANKRD36BQ8N2N9 1353 aa23.09■■□□□ 1.29
CDC42EP4-209ENST00000630622 SSH2Q76I76 1423 aa23.08■■□□□ 1.28
CDC42EP4-209ENST00000630622 ZNF692Q9BU19 519 aaPredicted RBP23.07■■□□□ 1.28
CDC42EP4-209ENST00000630622 TERF2IPQ9NYB0 399 aa23.07■■□□□ 1.28
CDC42EP4-209ENST00000630622 ALS2Q96Q42 1657 aa23.06■■□□□ 1.28
CDC42EP4-209ENST00000630622 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
CDC42EP4-209ENST00000630622 KTN1Q86UP2 1357 aaKnown RBP23.05■■□□□ 1.28
CDC42EP4-209ENST00000630622 HDGFL2Q7Z4V5 671 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms