RNA–Protein interactions for RNA: ENST00000629104.1

CHD2-216, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-216ENST00000629104 SIRT1Q96EB6 747 aa12.76□□□□□ -0.37
CHD2-216ENST00000629104 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
CHD2-216ENST00000629104 CDC42BPGQ6DT37 1551 aa12.75□□□□□ -0.37
CHD2-216ENST00000629104 WAPLQ7Z5K2 1190 aa12.75□□□□□ -0.37
CHD2-216ENST00000629104 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
CHD2-216ENST00000629104 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
CHD2-216ENST00000629104 TRAK1Q9UPV9 953 aa12.74□□□□□ -0.37
CHD2-216ENST00000629104 MST1RQ04912 1400 aa12.73□□□□□ -0.37
CHD2-216ENST00000629104 CCER1Q8TC90 406 aaPredicted RBP12.73□□□□□ -0.37
CHD2-216ENST00000629104 PRAM1Q96QH2 718 aa12.73□□□□□ -0.37
CHD2-216ENST00000629104 NBPF8Q3BBV2 869 aa12.72□□□□□ -0.37
CHD2-216ENST00000629104 POTEDQ86YR6 584 aa12.72□□□□□ -0.37
CHD2-216ENST00000629104 FMN2Q9NZ56 1722 aa12.71□□□□□ -0.37
CHD2-216ENST00000629104 POGKQ9P215 609 aa12.71□□□□□ -0.37
CHD2-216ENST00000629104 ADGRB2O60241 1585 aa12.71□□□□□ -0.37
CHD2-216ENST00000629104 RALGAPBQ86X10 1494 aa12.7□□□□□ -0.38
CHD2-216ENST00000629104 ROCK2O75116 1388 aaKnown RBP12.69□□□□□ -0.38
CHD2-216ENST00000629104 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
CHD2-216ENST00000629104 HSPA1LP34931 641 aa12.69□□□□□ -0.38
CHD2-216ENST00000629104 SAFB2Q14151 953 aaKnown RBP eCLIP12.69□□□□□ -0.38
CHD2-216ENST00000629104 C1orf167Q5SNV9 1468 aa12.69□□□□□ -0.38
CHD2-216ENST00000629104 TIMELESSQ9UNS1 1208 aa12.68□□□□□ -0.38
CHD2-216ENST00000629104 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
CHD2-216ENST00000629104 RGPD8O14715 1765 aaPredicted RBP12.68□□□□□ -0.38
CHD2-216ENST00000629104 GPRASP1Q5JY77 1395 aa12.68□□□□□ -0.38
CHD2-216ENST00000629104 QRICH2Q9H0J4 1663 aa12.67□□□□□ -0.38
CHD2-216ENST00000629104 AHDC1Q5TGY3 1603 aaPredicted RBP12.67□□□□□ -0.38
CHD2-216ENST00000629104 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
CHD2-216ENST00000629104 COL16A1Q07092 1604 aaPredicted RBP12.66□□□□□ -0.38
CHD2-216ENST00000629104 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
CHD2-216ENST00000629104 USP32Q8NFA0 1604 aa12.65□□□□□ -0.38
CHD2-216ENST00000629104 HIRIP3Q9BW71 556 aaPredicted RBP12.64□□□□□ -0.39
CHD2-216ENST00000629104 KIF1AQ12756 1690 aa12.64□□□□□ -0.39
CHD2-216ENST00000629104 CENPJQ9HC77 1338 aaPredicted RBP12.63□□□□□ -0.39
CHD2-216ENST00000629104 TULP4Q9NRJ4 1543 aa12.63□□□□□ -0.39
CHD2-216ENST00000629104 NUTM2FA1L443 756 aa12.63□□□□□ -0.39
CHD2-216ENST00000629104 ORAI2Q96SN7 254 aa12.63□□□□□ -0.39
CHD2-216ENST00000629104 CARD11Q9BXL7 1154 aa12.63□□□□□ -0.39
CHD2-216ENST00000629104 EIF3AQ14152 1382 aaKnown RBP12.63□□□□□ -0.39
CHD2-216ENST00000629104 ANKARQ7Z5J8 1434 aa12.62□□□□□ -0.39
CHD2-216ENST00000629104 WASLO00401 505 aaPredicted RBP12.62□□□□□ -0.39
CHD2-216ENST00000629104 ITSN1Q15811 1721 aa12.62□□□□□ -0.39
CHD2-216ENST00000629104 MAPK8IP2Q13387 824 aaPredicted RBP12.61□□□□□ -0.39
CHD2-216ENST00000629104 ESCO1Q5FWF5 840 aa12.61□□□□□ -0.39
CHD2-216ENST00000629104 SHPRHQ149N8 1683 aa12.59□□□□□ -0.39
CHD2-216ENST00000629104 TOPAZ1Q8N9V7 1692 aa12.59□□□□□ -0.39
CHD2-216ENST00000629104 DDX17Q92841 729 aaKnown RBP12.59□□□□□ -0.39
CHD2-216ENST00000629104 PRR36Q9H6K5 1346 aa12.59□□□□□ -0.39
CHD2-216ENST00000629104 ATP7BP35670 1465 aa12.59□□□□□ -0.39
CHD2-216ENST00000629104 CDK19Q9BWU1 502 aa12.58□□□□□ -0.4
CHD2-216ENST00000629104 PXDNQ92626 1479 aa12.58□□□□□ -0.4
CHD2-216ENST00000629104 PHF8Q9UPP1 1060 aa12.57□□□□□ -0.4
CHD2-216ENST00000629104 SOS2Q07890 1332 aaPredicted RBP12.57□□□□□ -0.4
CHD2-216ENST00000629104 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
CHD2-216ENST00000629104 JCADQ9P266 1359 aa12.56□□□□□ -0.4
CHD2-216ENST00000629104 SBNO2Q9Y2G9 1366 aa12.56□□□□□ -0.4
CHD2-216ENST00000629104 FOXO3O43524 673 aa12.56□□□□□ -0.4
CHD2-216ENST00000629104 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
CHD2-216ENST00000629104 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
CHD2-216ENST00000629104 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
CHD2-216ENST00000629104 EVC2Q86UK5 1308 aa12.55□□□□□ -0.4
CHD2-216ENST00000629104 MED1Q15648 1581 aaPredicted RBP12.55□□□□□ -0.4
CHD2-216ENST00000629104 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
CHD2-216ENST00000629104 PMFBP1Q8TBY8 1022 aa12.54□□□□□ -0.4
CHD2-216ENST00000629104 USP47Q96K76 1375 aa12.54□□□□□ -0.4
CHD2-216ENST00000629104 XPCQ01831 940 aaPredicted RBP12.53□□□□□ -0.4
CHD2-216ENST00000629104 CABP2Q9NPB3 220 aa12.53□□□□□ -0.4
CHD2-216ENST00000629104 TRPM3Q9HCF6 1732 aaPredicted RBP12.53□□□□□ -0.4
CHD2-216ENST00000629104 COL22A1Q8NFW1 1626 aaPredicted RBP12.52□□□□□ -0.4
CHD2-216ENST00000629104 ST20-MTHFSA0A0A6YYL1 179 aa12.52□□□□□ -0.41
CHD2-216ENST00000629104 CCDC61Q9Y6R9 512 aa12.52□□□□□ -0.41
CHD2-216ENST00000629104 PNPLA6Q8IY17 1366 aa12.52□□□□□ -0.41
CHD2-216ENST00000629104 KRT28Q7Z3Y7 464 aa12.51□□□□□ -0.41
CHD2-216ENST00000629104 TESK2Q96S53 571 aa12.51□□□□□ -0.41
CHD2-216ENST00000629104 SPATA31A6Q5VVP1 1343 aa12.51□□□□□ -0.41
CHD2-216ENST00000629104 PPIP5K1Q6PFW1 1433 aa12.51□□□□□ -0.41
CHD2-216ENST00000629104 PLEKHG3A1L390 1219 aa12.5□□□□□ -0.41
CHD2-216ENST00000629104 PSME1Q06323 249 aa12.5□□□□□ -0.41
CHD2-216ENST00000629104 NGDNQ8NEJ9 315 aaKnown RBP12.5□□□□□ -0.41
CHD2-216ENST00000629104 POLR3AO14802 1390 aaPredicted RBP12.5□□□□□ -0.41
CHD2-216ENST00000629104 ALS2Q96Q42 1657 aa12.5□□□□□ -0.41
CHD2-216ENST00000629104 LRP6O75581 1613 aa12.49□□□□□ -0.41
CHD2-216ENST00000629104 TNS3Q68CZ2 1445 aa12.49□□□□□ -0.41
CHD2-216ENST00000629104 SBNO1A3KN83 1393 aa12.49□□□□□ -0.41
CHD2-216ENST00000629104 ATAD2Q6PL18 1390 aa12.49□□□□□ -0.41
CHD2-216ENST00000629104 ACEP12821 1306 aa12.49□□□□□ -0.41
CHD2-216ENST00000629104 SPATA31A3Q5VYP0 1347 aa12.49□□□□□ -0.41
CHD2-216ENST00000629104 AKAP12Q02952 1782 aa12.48□□□□□ -0.41
CHD2-216ENST00000629104 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
CHD2-216ENST00000629104 CABP1Q9NZU7 370 aa12.47□□□□□ -0.41
CHD2-216ENST00000629104 ABCA3Q99758 1704 aa12.47□□□□□ -0.41
CHD2-216ENST00000629104 MARF1Q9Y4F3 1742 aaKnown RBP12.46□□□□□ -0.41
CHD2-216ENST00000629104 PUS7Q96PZ0 661 aaKnown RBP12.46□□□□□ -0.41
CHD2-216ENST00000629104 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
CHD2-216ENST00000629104 ARHGEF10O15013 1369 aa12.45□□□□□ -0.42
CHD2-216ENST00000629104 DISP3Q9P2K9 1392 aa12.45□□□□□ -0.42
CHD2-216ENST00000629104 NUTM2BA6NNL0 878 aaPredicted RBP12.45□□□□□ -0.42
CHD2-216ENST00000629104 NUTM2EB1AL46 878 aaPredicted RBP12.45□□□□□ -0.42
CHD2-216ENST00000629104 NUTM2AQ8IVF1 878 aaPredicted RBP12.45□□□□□ -0.42
CHD2-216ENST00000629104 CRYBG1Q9Y4K1 1723 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms