RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 POGKQ9P215 609 aa29.84■■■□□ 2.37
CIRBP-246ENST00000628979 C1orf167Q5SNV9 1468 aa29.84■■■□□ 2.37
CIRBP-246ENST00000628979 ADGRB1O14514 1584 aa29.84■■■□□ 2.37
CIRBP-246ENST00000628979 NUTM2FA1L443 756 aa29.82■■■□□ 2.36
CIRBP-246ENST00000628979 MED1Q15648 1581 aaPredicted RBP29.81■■■□□ 2.36
CIRBP-246ENST00000628979 DDX17Q92841 729 aaKnown RBP29.8■■■□□ 2.36
CIRBP-246ENST00000628979 ORAI2Q96SN7 254 aa29.8■■■□□ 2.36
CIRBP-246ENST00000628979 AHDC1Q5TGY3 1603 aaPredicted RBP29.79■■■□□ 2.36
CIRBP-246ENST00000628979 CDC42BPGQ6DT37 1551 aa29.79■■■□□ 2.36
CIRBP-246ENST00000628979 COL16A1Q07092 1604 aaPredicted RBP29.78■■■□□ 2.36
CIRBP-246ENST00000628979 PCGF6Q9BYE7 350 aa29.77■■■□□ 2.36
CIRBP-246ENST00000628979 DLC1Q96QB1 1528 aa29.76■■■□□ 2.36
CIRBP-246ENST00000628979 ESCO1Q5FWF5 840 aa29.76■■■□□ 2.35
CIRBP-246ENST00000628979 JCADQ9P266 1359 aa29.75■■■□□ 2.35
CIRBP-246ENST00000628979 NBPF1Q3BBV0 1214 aa29.74■■■□□ 2.35
CIRBP-246ENST00000628979 PHF23Q9BUL5 403 aaPredicted RBP29.73■■■□□ 2.35
CIRBP-246ENST00000628979 NHSL1Q5SYE7 1610 aa29.73■■■□□ 2.35
CIRBP-246ENST00000628979 KIAA1210Q9ULL0 1709 aa29.72■■■□□ 2.35
CIRBP-246ENST00000628979 HIRIP3Q9BW71 556 aaPredicted RBP29.71■■■□□ 2.35
CIRBP-246ENST00000628979 MINK1Q8N4C8 1332 aaPredicted RBP29.71■■■□□ 2.35
CIRBP-246ENST00000628979 FMN2Q9NZ56 1722 aa29.7■■■□□ 2.34
CIRBP-246ENST00000628979 LRRC59Q96AG4 307 aaKnown RBP29.66■■■□□ 2.34
CIRBP-246ENST00000628979 ARHGEF28Q8N1W1 1705 aaKnown RBP29.65■■■□□ 2.34
CIRBP-246ENST00000628979 TONSLQ96HA7 1378 aa29.64■■■□□ 2.33
CIRBP-246ENST00000628979 ILDR2Q71H61 639 aa29.63■■■□□ 2.33
CIRBP-246ENST00000628979 RGPD8O14715 1765 aaPredicted RBP29.62■■■□□ 2.33
CIRBP-246ENST00000628979 FOXO3O43524 673 aa29.62■■■□□ 2.33
CIRBP-246ENST00000628979 SHPRHQ149N8 1683 aa29.61■■■□□ 2.33
CIRBP-246ENST00000628979 NUTM2BA6NNL0 878 aaPredicted RBP29.61■■■□□ 2.33
CIRBP-246ENST00000628979 NUTM2EB1AL46 878 aaPredicted RBP29.61■■■□□ 2.33
CIRBP-246ENST00000628979 XPCQ01831 940 aaPredicted RBP29.61■■■□□ 2.33
CIRBP-246ENST00000628979 NUTM2AQ8IVF1 878 aaPredicted RBP29.61■■■□□ 2.33
CIRBP-246ENST00000628979 SOS2Q07890 1332 aaPredicted RBP29.59■■■□□ 2.33
CIRBP-246ENST00000628979 SPATA31A6Q5VVP1 1343 aa29.59■■■□□ 2.33
CIRBP-246ENST00000628979 NPHP3Q7Z494 1330 aa29.59■■■□□ 2.33
CIRBP-246ENST00000628979 ADGRB2O60241 1585 aa29.58■■■□□ 2.33
CIRBP-246ENST00000628979 NBPF8Q3BBV2 869 aa29.58■■■□□ 2.33
CIRBP-246ENST00000628979 TRPM1Q7Z4N2 1603 aa29.57■■■□□ 2.32
CIRBP-246ENST00000628979 WASLO00401 505 aaPredicted RBP29.57■■■□□ 2.32
CIRBP-246ENST00000628979 MEX3CQ5U5Q3 659 aaKnown RBP29.57■■■□□ 2.32
CIRBP-246ENST00000628979 PHF8Q9UPP1 1060 aa29.57■■■□□ 2.32
CIRBP-246ENST00000628979 ROCK2O75116 1388 aaKnown RBP29.55■■■□□ 2.32
CIRBP-246ENST00000628979 PNPLA6Q8IY17 1366 aa29.53■■■□□ 2.32
CIRBP-246ENST00000628979 LRP6O75581 1613 aa29.53■■■□□ 2.32
CIRBP-246ENST00000628979 PMFBP1Q8TBY8 1022 aa29.53■■■□□ 2.32
CIRBP-246ENST00000628979 KIF1AQ12756 1690 aa29.53■■■□□ 2.32
CIRBP-246ENST00000628979 USP32Q8NFA0 1604 aa29.52■■■□□ 2.32
CIRBP-246ENST00000628979 CENPJQ9HC77 1338 aaPredicted RBP29.51■■■□□ 2.32
CIRBP-246ENST00000628979 ANKARQ7Z5J8 1434 aa29.51■■■□□ 2.31
CIRBP-246ENST00000628979 EIF3AQ14152 1382 aaKnown RBP29.51■■■□□ 2.31
CIRBP-246ENST00000628979 PXDNQ92626 1479 aa29.5■■■□□ 2.31
CIRBP-246ENST00000628979 KRT28Q7Z3Y7 464 aa29.5■■■□□ 2.31
CIRBP-246ENST00000628979 CDK19Q9BWU1 502 aa29.5■■■□□ 2.31
CIRBP-246ENST00000628979 RGS17Q9UGC6 210 aaPredicted RBP29.5■■■□□ 2.31
CIRBP-246ENST00000628979 PRR36Q9H6K5 1346 aa29.49■■■□□ 2.31
CIRBP-246ENST00000628979 TULP4Q9NRJ4 1543 aa29.48■■■□□ 2.31
CIRBP-246ENST00000628979 PSME1Q06323 249 aa29.47■■■□□ 2.31
CIRBP-246ENST00000628979 NUDT16Q96DE0 195 aaKnown RBP29.45■■■□□ 2.31
CIRBP-246ENST00000628979 QRICH2Q9H0J4 1663 aa29.44■■■□□ 2.3
CIRBP-246ENST00000628979 ADAMTS2O95450 1211 aa29.42■■■□□ 2.3
CIRBP-246ENST00000628979 CARD11Q9BXL7 1154 aa29.42■■■□□ 2.3
CIRBP-246ENST00000628979 SRPK2P78362 688 aaKnown RBP29.41■■■□□ 2.3
CIRBP-246ENST00000628979 NGDNQ8NEJ9 315 aaKnown RBP29.41■■■□□ 2.3
CIRBP-246ENST00000628979 LMOD2Q6P5Q4 547 aa29.4■■■□□ 2.3
CIRBP-246ENST00000628979 SPATA31A3Q5VYP0 1347 aa29.4■■■□□ 2.3
CIRBP-246ENST00000628979 PLEKHG5O94827 1062 aa29.39■■■□□ 2.3
CIRBP-246ENST00000628979 POTEAQ6S8J7 498 aa29.39■■■□□ 2.3
CIRBP-246ENST00000628979 C8orf37Q96NL8 207 aa29.39■■■□□ 2.3
CIRBP-246ENST00000628979 ATP7BP35670 1465 aa29.38■■■□□ 2.29
CIRBP-246ENST00000628979 CCER1Q8TC90 406 aaPredicted RBP29.38■■■□□ 2.29
CIRBP-246ENST00000628979 CABP2Q9NPB3 220 aa29.37■■■□□ 2.29
CIRBP-246ENST00000628979 GPRASP1Q5JY77 1395 aa29.37■■■□□ 2.29
CIRBP-246ENST00000628979 ITSN1Q15811 1721 aa29.37■■■□□ 2.29
CIRBP-246ENST00000628979 COL22A1Q8NFW1 1626 aaPredicted RBP29.36■■■□□ 2.29
CIRBP-246ENST00000628979 RALGAPBQ86X10 1494 aa29.36■■■□□ 2.29
CIRBP-246ENST00000628979 CLSPNQ9HAW4 1339 aa29.34■■■□□ 2.29
CIRBP-246ENST00000628979 TNS3Q68CZ2 1445 aa29.34■■■□□ 2.29
CIRBP-246ENST00000628979 ZNF772Q68DY9 489 aaPredicted RBP29.33■■■□□ 2.29
CIRBP-246ENST00000628979 CCDC61Q9Y6R9 512 aa29.33■■■□□ 2.29
CIRBP-246ENST00000628979 AFF2P51816 1311 aa29.33■■■□□ 2.29
CIRBP-246ENST00000628979 SBNO1A3KN83 1393 aa29.32■■■□□ 2.28
CIRBP-246ENST00000628979 NGLY1Q96IV0 654 aa29.32■■■□□ 2.28
CIRBP-246ENST00000628979 EVC2Q86UK5 1308 aa29.31■■■□□ 2.28
CIRBP-246ENST00000628979 PAK3O75914 559 aaPredicted RBP29.31■■■□□ 2.28
CIRBP-246ENST00000628979 HAP1P54257 671 aaPredicted RBP29.29■■■□□ 2.28
CIRBP-246ENST00000628979 ACEP12821 1306 aa29.28■■■□□ 2.28
CIRBP-246ENST00000628979 CABLES1Q8TDN4 633 aa29.28■■■□□ 2.28
CIRBP-246ENST00000628979 TOPAZ1Q8N9V7 1692 aa29.28■■■□□ 2.28
CIRBP-246ENST00000628979 TRPM3Q9HCF6 1732 aaPredicted RBP29.26■■■□□ 2.27
CIRBP-246ENST00000628979 PLEKHG3A1L390 1219 aa29.26■■■□□ 2.27
CIRBP-246ENST00000628979 SOCS7O14512 581 aa29.26■■■□□ 2.27
CIRBP-246ENST00000628979 PPIP5K1Q6PFW1 1433 aa29.26■■■□□ 2.27
CIRBP-246ENST00000628979 ARHGEF10O15013 1369 aa29.26■■■□□ 2.27
CIRBP-246ENST00000628979 TIMELESSQ9UNS1 1208 aa29.24■■■□□ 2.27
CIRBP-246ENST00000628979 CABP1Q9NZU7 370 aa29.23■■■□□ 2.27
CIRBP-246ENST00000628979 POLR3AO14802 1390 aaPredicted RBP29.21■■■□□ 2.27
CIRBP-246ENST00000628979 MARF1Q9Y4F3 1742 aaKnown RBP29.2■■■□□ 2.27
CIRBP-246ENST00000628979 QTRT2Q9H974 415 aaKnown RBP29.2■■■□□ 2.26
CIRBP-246ENST00000628979 USP21Q9UK80 565 aa29.2■■■□□ 2.26
CIRBP-246ENST00000628979 ALS2Q96Q42 1657 aa29.19■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms