RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 KIAA1210Q9ULL0 1709 aa32.51■■■□□ 2.79
SF1-220ENST00000626028 TRIM26Q12899 539 aaPredicted RBP32.49■■■□□ 2.79
SF1-220ENST00000626028 KDM2AQ9Y2K7 1162 aa32.49■■■□□ 2.79
SF1-220ENST00000626028 WAPLQ7Z5K2 1190 aa32.46■■■□□ 2.79
SF1-220ENST00000626028 FMN2Q9NZ56 1722 aa32.45■■■□□ 2.78
SF1-220ENST00000626028 SPATA31A6Q5VVP1 1343 aa32.42■■■□□ 2.78
SF1-220ENST00000626028 PHF23Q9BUL5 403 aaPredicted RBP32.41■■■□□ 2.78
SF1-220ENST00000626028 PLEKHH1Q9ULM0 1364 aa32.41■■■□□ 2.78
SF1-220ENST00000626028 ADGRB2O60241 1585 aa32.37■■■□□ 2.77
SF1-220ENST00000626028 LRRC59Q96AG4 307 aaKnown RBP32.37■■■□□ 2.77
SF1-220ENST00000626028 ILDR2Q71H61 639 aa32.35■■■□□ 2.77
SF1-220ENST00000626028 PRAM1Q96QH2 718 aa32.35■■■□□ 2.77
SF1-220ENST00000626028 ARHGEF28Q8N1W1 1705 aaKnown RBP32.34■■■□□ 2.77
SF1-220ENST00000626028 KIF1AQ12756 1690 aa32.34■■■□□ 2.77
SF1-220ENST00000626028 ORAI2Q96SN7 254 aa32.34■■■□□ 2.77
SF1-220ENST00000626028 POGKQ9P215 609 aa32.33■■■□□ 2.77
SF1-220ENST00000626028 RGPD8O14715 1765 aaPredicted RBP32.32■■■□□ 2.77
SF1-220ENST00000626028 SOS2Q07890 1332 aaPredicted RBP32.31■■■□□ 2.76
SF1-220ENST00000626028 NPHP3Q7Z494 1330 aa32.29■■■□□ 2.76
SF1-220ENST00000626028 ESCO1Q5FWF5 840 aa32.29■■■□□ 2.76
SF1-220ENST00000626028 TRAK1Q9UPV9 953 aa32.29■■■□□ 2.76
SF1-220ENST00000626028 ANKARQ7Z5J8 1434 aa32.25■■■□□ 2.75
SF1-220ENST00000626028 EIF3AQ14152 1382 aaKnown RBP32.24■■■□□ 2.75
SF1-220ENST00000626028 DDX17Q92841 729 aaKnown RBP32.24■■■□□ 2.75
SF1-220ENST00000626028 L3MBTL2Q969R5 705 aa32.24■■■□□ 2.75
SF1-220ENST00000626028 PNPLA6Q8IY17 1366 aa32.23■■■□□ 2.75
SF1-220ENST00000626028 LRP6O75581 1613 aa32.22■■■□□ 2.75
SF1-220ENST00000626028 SIN3AQ96ST3 1273 aa32.22■■■□□ 2.75
SF1-220ENST00000626028 PXDNQ92626 1479 aa32.22■■■□□ 2.75
SF1-220ENST00000626028 COL22A1Q8NFW1 1626 aaPredicted RBP32.22■■■□□ 2.75
SF1-220ENST00000626028 SAFB2Q14151 953 aaKnown RBP eCLIP32.21■■■□□ 2.75
SF1-220ENST00000626028 RGS17Q9UGC6 210 aaPredicted RBP32.2■■■□□ 2.75
SF1-220ENST00000626028 USP32Q8NFA0 1604 aa32.19■■■□□ 2.74
SF1-220ENST00000626028 TRPM1Q7Z4N2 1603 aa32.18■■■□□ 2.74
SF1-220ENST00000626028 NUTM2FA1L443 756 aa32.17■■■□□ 2.74
SF1-220ENST00000626028 SOCS7O14512 581 aa32.17■■■□□ 2.74
SF1-220ENST00000626028 FOXO3O43524 673 aa32.17■■■□□ 2.74
SF1-220ENST00000626028 NEUROD1Q13562 356 aa32.16■■■□□ 2.74
SF1-220ENST00000626028 ITSN1Q15811 1721 aa32.16■■■□□ 2.74
SF1-220ENST00000626028 TULP4Q9NRJ4 1543 aa32.16■■■□□ 2.74
SF1-220ENST00000626028 MEX3CQ5U5Q3 659 aaKnown RBP32.15■■■□□ 2.74
SF1-220ENST00000626028 MINK1Q8N4C8 1332 aaPredicted RBP32.13■■■□□ 2.73
SF1-220ENST00000626028 WASLO00401 505 aaPredicted RBP32.12■■■□□ 2.73
SF1-220ENST00000626028 NBPF1Q3BBV0 1214 aa32.12■■■□□ 2.73
SF1-220ENST00000626028 PHF8Q9UPP1 1060 aa32.12■■■□□ 2.73
SF1-220ENST00000626028 NUTM2BA6NNL0 878 aaPredicted RBP32.08■■■□□ 2.73
SF1-220ENST00000626028 NUTM2EB1AL46 878 aaPredicted RBP32.08■■■□□ 2.73
SF1-220ENST00000626028 ZNF772Q68DY9 489 aaPredicted RBP32.08■■■□□ 2.73
SF1-220ENST00000626028 NUTM2AQ8IVF1 878 aaPredicted RBP32.08■■■□□ 2.73
SF1-220ENST00000626028 HIRIP3Q9BW71 556 aaPredicted RBP32.08■■■□□ 2.73
SF1-220ENST00000626028 MARF1Q9Y4F3 1742 aaKnown RBP32.08■■■□□ 2.73
SF1-220ENST00000626028 PSME1Q06323 249 aa32.07■■■□□ 2.72
SF1-220ENST00000626028 QRICH2Q9H0J4 1663 aa32.05■■■□□ 2.72
SF1-220ENST00000626028 KRT28Q7Z3Y7 464 aa32.04■■■□□ 2.72
SF1-220ENST00000626028 SPATA31A3Q5VYP0 1347 aa32.03■■■□□ 2.72
SF1-220ENST00000626028 POTEAQ6S8J7 498 aa32.03■■■□□ 2.72
SF1-220ENST00000626028 SBNO1A3KN83 1393 aa32.03■■■□□ 2.72
SF1-220ENST00000626028 TONSLQ96HA7 1378 aa32.02■■■□□ 2.72
SF1-220ENST00000626028 XPCQ01831 940 aaPredicted RBP32.01■■■□□ 2.71
SF1-220ENST00000626028 ATP7BP35670 1465 aa32.01■■■□□ 2.71
SF1-220ENST00000626028 CENPJQ9HC77 1338 aaPredicted RBP32■■■□□ 2.71
SF1-220ENST00000626028 TOPAZ1Q8N9V7 1692 aa32■■■□□ 2.71
SF1-220ENST00000626028 ROCK2O75116 1388 aaKnown RBP32■■■□□ 2.71
SF1-220ENST00000626028 PRR36Q9H6K5 1346 aa32■■■□□ 2.71
SF1-220ENST00000626028 TRPM3Q9HCF6 1732 aaPredicted RBP31.99■■■□□ 2.71
SF1-220ENST00000626028 TNS3Q68CZ2 1445 aa31.99■■■□□ 2.71
SF1-220ENST00000626028 GPRASP1Q5JY77 1395 aa31.97■■■□□ 2.71
SF1-220ENST00000626028 ARHGEF10O15013 1369 aa31.96■■■□□ 2.71
SF1-220ENST00000626028 CDK19Q9BWU1 502 aa31.96■■■□□ 2.71
SF1-220ENST00000626028 PMFBP1Q8TBY8 1022 aa31.95■■■□□ 2.71
SF1-220ENST00000626028 NUDT16Q96DE0 195 aaKnown RBP31.95■■■□□ 2.71
SF1-220ENST00000626028 AFF2P51816 1311 aa31.94■■■□□ 2.7
SF1-220ENST00000626028 ALS2Q96Q42 1657 aa31.93■■■□□ 2.7
SF1-220ENST00000626028 C8orf37Q96NL8 207 aa31.93■■■□□ 2.7
SF1-220ENST00000626028 ADAMTS2O95450 1211 aa31.91■■■□□ 2.7
SF1-220ENST00000626028 CCDC61Q9Y6R9 512 aa31.91■■■□□ 2.7
SF1-220ENST00000626028 RALGAPBQ86X10 1494 aa31.91■■■□□ 2.7
SF1-220ENST00000626028 ABCA3Q99758 1704 aa31.9■■■□□ 2.7
SF1-220ENST00000626028 NBPF8Q3BBV2 869 aa31.9■■■□□ 2.7
SF1-220ENST00000626028 NGLY1Q96IV0 654 aa31.9■■■□□ 2.7
SF1-220ENST00000626028 CLSPNQ9HAW4 1339 aa31.9■■■□□ 2.7
SF1-220ENST00000626028 NGDNQ8NEJ9 315 aaKnown RBP31.89■■■□□ 2.7
SF1-220ENST00000626028 POLR3AO14802 1390 aaPredicted RBP31.87■■■□□ 2.69
SF1-220ENST00000626028 FNBP4Q8N3X1 1017 aaPredicted RBP31.87■■■□□ 2.69
SF1-220ENST00000626028 CDK12Q9NYV4 1490 aaPredicted RBP31.86■■■□□ 2.69
SF1-220ENST00000626028 PLEKHG3A1L390 1219 aa31.85■■■□□ 2.69
SF1-220ENST00000626028 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.85■■■□□ 2.69
SF1-220ENST00000626028 SBNO2Q9Y2G9 1366 aa31.83■■■□□ 2.69
SF1-220ENST00000626028 EVC2Q86UK5 1308 aa31.83■■■□□ 2.69
SF1-220ENST00000626028 RXRBP28702 533 aa31.83■■■□□ 2.69
SF1-220ENST00000626028 SRPK2P78362 688 aaKnown RBP31.82■■■□□ 2.68
SF1-220ENST00000626028 TIMELESSQ9UNS1 1208 aa31.8■■■□□ 2.68
SF1-220ENST00000626028 CARD11Q9BXL7 1154 aa31.79■■■□□ 2.68
SF1-220ENST00000626028 QTRT2Q9H974 415 aaKnown RBP31.79■■■□□ 2.68
SF1-220ENST00000626028 USP21Q9UK80 565 aa31.79■■■□□ 2.68
SF1-220ENST00000626028 NWD2Q9ULI1 1742 aa31.79■■■□□ 2.68
SF1-220ENST00000626028 CRYBG1Q9Y4K1 1723 aa31.79■■■□□ 2.68
SF1-220ENST00000626028 LMOD2Q6P5Q4 547 aa31.78■■■□□ 2.68
SF1-220ENST00000626028 PCGF6Q9BYE7 350 aa31.78■■■□□ 2.68
SF1-220ENST00000626028 BRD4O60885 1362 aaPredicted RBP31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms