RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	CRIPAK	Q8N1N5	446 aa		12.51	□□□□□ -0.41
NRXN1-223	ENST00000625891	SLC24A3	Q9HC58	644 aa		12.49	□□□□□ -0.41
NRXN1-223	ENST00000625891	AVP	P01185	164 aa		12.48	□□□□□ -0.41
NRXN1-223	ENST00000625891	MSS51	Q4VC12	460 aa		12.48	□□□□□ -0.41
NRXN1-223	ENST00000625891	RNF19B	Q6ZMZ0	732 aa		12.48	□□□□□ -0.41
NRXN1-223	ENST00000625891	CYP4X1	Q8N118	509 aa		12.47	□□□□□ -0.41
NRXN1-223	ENST00000625891	GRIPAP1	Q4V328	841 aa		12.46	□□□□□ -0.41
NRXN1-223	ENST00000625891	DACH1	Q9UI36	760 aa		12.46	□□□□□ -0.41
NRXN1-223	ENST00000625891	ZBTB24	O43167	697 aa	Predicted RBP	12.43	□□□□□ -0.42
NRXN1-223	ENST00000625891	TREML4	Q6UXN2	200 aa		12.42	□□□□□ -0.42
NRXN1-223	ENST00000625891	AXIN1	O15169	862 aa		12.41	□□□□□ -0.42
NRXN1-223	ENST00000625891	CD46	P15529	392 aa		12.41	□□□□□ -0.42
NRXN1-223	ENST00000625891	MAP2K5	Q13163	448 aa		12.41	□□□□□ -0.42
NRXN1-223	ENST00000625891	CTC1	Q2NKJ3	1217 aa		12.41	□□□□□ -0.42
NRXN1-223	ENST00000625891		Q3C1V9	767 aa		12.41	□□□□□ -0.42
NRXN1-223	ENST00000625891	LCE2A	Q5TA79	106 aa	Predicted RBP	12.41	□□□□□ -0.42
NRXN1-223	ENST00000625891	SMCP	P49901	116 aa	Predicted RBP	12.4	□□□□□ -0.42
NRXN1-223	ENST00000625891	MMP16	P51512	607 aa		12.4	□□□□□ -0.42
NRXN1-223	ENST00000625891	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.39	□□□□□ -0.43
NRXN1-223	ENST00000625891	AK7	Q96M32	723 aa		12.39	□□□□□ -0.43
NRXN1-223	ENST00000625891	TTC24	A2A3L6	582 aa	Predicted RBP	12.38	□□□□□ -0.43
NRXN1-223	ENST00000625891	WNT7A	O00755	349 aa		12.38	□□□□□ -0.43
NRXN1-223	ENST00000625891	IRF6	O14896	467 aa		12.38	□□□□□ -0.43
NRXN1-223	ENST00000625891	KRI1	Q8N9T8	703 aa	Known RBP	12.38	□□□□□ -0.43
NRXN1-223	ENST00000625891	GMPR2	Q9P2T1	348 aa	Known RBP	12.38	□□□□□ -0.43
NRXN1-223	ENST00000625891	KDM4A	O75164	1064 aa		12.36	□□□□□ -0.43
NRXN1-223	ENST00000625891	TRIM32	Q13049	653 aa		12.36	□□□□□ -0.43
NRXN1-223	ENST00000625891	SNIP1	Q8TAD8	396 aa	Known RBP	12.35	□□□□□ -0.43
NRXN1-223	ENST00000625891	CCDC102A	Q96A19	550 aa		12.35	□□□□□ -0.43
NRXN1-223	ENST00000625891	USB1	Q9BQ65	265 aa	Known RBP	12.35	□□□□□ -0.43
NRXN1-223	ENST00000625891	C11orf95	C9JLR9	678 aa	Predicted RBP	12.34	□□□□□ -0.43
NRXN1-223	ENST00000625891	TRIM66	O15016	1216 aa		12.34	□□□□□ -0.43
NRXN1-223	ENST00000625891	DXO	O77932	396 aa	Known RBP	12.34	□□□□□ -0.43
NRXN1-223	ENST00000625891	SMPD1	P17405	629 aa		12.34	□□□□□ -0.43
NRXN1-223	ENST00000625891	BRPF1	P55201	1214 aa	Predicted RBP	12.34	□□□□□ -0.43
NRXN1-223	ENST00000625891	USP46	P62068	366 aa		12.32	□□□□□ -0.44
NRXN1-223	ENST00000625891	MRGPRX2	Q96LB1	330 aa		12.32	□□□□□ -0.44
NRXN1-223	ENST00000625891	MDM2	Q00987	491 aa	Predicted RBP	12.31	□□□□□ -0.44
NRXN1-223	ENST00000625891	HLA-C	Q95604	372 aa		12.31	□□□□□ -0.44
NRXN1-223	ENST00000625891		J3QL48	77 aa		12.28	□□□□□ -0.44
NRXN1-223	ENST00000625891	HOXA2	O43364	376 aa		12.27	□□□□□ -0.45
NRXN1-223	ENST00000625891	WFS1	O76024	890 aa		12.27	□□□□□ -0.45
NRXN1-223	ENST00000625891	PDE4D	Q08499	809 aa		12.26	□□□□□ -0.45
NRXN1-223	ENST00000625891	AMHR2	Q16671	573 aa		12.26	□□□□□ -0.45
NRXN1-223	ENST00000625891	CCDC24	Q8N4L8	307 aa		12.26	□□□□□ -0.45
NRXN1-223	ENST00000625891	REPIN1	Q9BWE0	567 aa	Known RBP	12.26	□□□□□ -0.45
NRXN1-223	ENST00000625891	ATP13A2	Q9NQ11	1180 aa		12.26	□□□□□ -0.45
NRXN1-223	ENST00000625891	SKOR1	P84550	965 aa		12.24	□□□□□ -0.45
NRXN1-223	ENST00000625891	NFX1	Q12986	1120 aa	Known RBP	12.24	□□□□□ -0.45
NRXN1-223	ENST00000625891	RC3H1	Q5TC82	1133 aa	Known RBP	12.24	□□□□□ -0.45
NRXN1-223	ENST00000625891	WNT7B	P56706	349 aa		12.23	□□□□□ -0.45
NRXN1-223	ENST00000625891	GUCA2A	Q02747	115 aa		12.23	□□□□□ -0.45
NRXN1-223	ENST00000625891	NEUROD2	Q15784	382 aa		12.23	□□□□□ -0.45
NRXN1-223	ENST00000625891	HPS1	Q92902	700 aa		12.22	□□□□□ -0.45
NRXN1-223	ENST00000625891	SNRPB	P14678	240 aa	Known RBP	12.21	□□□□□ -0.45
NRXN1-223	ENST00000625891	GPBP1L1	Q9HC44	474 aa	Predicted RBP	12.21	□□□□□ -0.45
NRXN1-223	ENST00000625891	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.21	□□□□□ -0.45
NRXN1-223	ENST00000625891	JUND	P17535	347 aa		12.2	□□□□□ -0.46
NRXN1-223	ENST00000625891	SYMPK	Q92797	1274 aa	Known RBP	12.2	□□□□□ -0.46
NRXN1-223	ENST00000625891	GPCPD1	Q9NPB8	672 aa		12.2	□□□□□ -0.46
NRXN1-223	ENST00000625891	CLCN1	P35523	988 aa		12.19	□□□□□ -0.46
NRXN1-223	ENST00000625891	PARP9	Q8IXQ6	854 aa		12.19	□□□□□ -0.46
NRXN1-223	ENST00000625891	TRIM47	Q96LD4	638 aa		12.19	□□□□□ -0.46
NRXN1-223	ENST00000625891	SENP2	Q9HC62	589 aa		12.19	□□□□□ -0.46
NRXN1-223	ENST00000625891	WIPF1	O43516	503 aa		12.16	□□□□□ -0.46
NRXN1-223	ENST00000625891	RETREG3	Q86VR2	466 aa		12.16	□□□□□ -0.46
NRXN1-223	ENST00000625891	KDM4C	Q9H3R0	1056 aa		12.16	□□□□□ -0.46
NRXN1-223	ENST00000625891	NUTM1	Q86Y26	1132 aa		12.15	□□□□□ -0.46
NRXN1-223	ENST00000625891	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.14	□□□□□ -0.47
NRXN1-223	ENST00000625891	TERT	O14746	1132 aa	Known RBP	12.13	□□□□□ -0.47
NRXN1-223	ENST00000625891	ALDH1A1	P00352	501 aa		12.13	□□□□□ -0.47
NRXN1-223	ENST00000625891	LCE2C	Q5TA81	110 aa		12.13	□□□□□ -0.47
NRXN1-223	ENST00000625891	KIFC2	Q96AC6	838 aa		12.13	□□□□□ -0.47
NRXN1-223	ENST00000625891	NUDT12	Q9BQG2	462 aa		12.13	□□□□□ -0.47
NRXN1-223	ENST00000625891	SIAH2	O43255	324 aa		12.12	□□□□□ -0.47
NRXN1-223	ENST00000625891	PCDHGC3	Q9UN70	934 aa		12.12	□□□□□ -0.47
NRXN1-223	ENST00000625891	FDX1	P10109	184 aa		12.1	□□□□□ -0.47
NRXN1-223	ENST00000625891	TTLL12	Q14166	644 aa	Predicted RBP	12.1	□□□□□ -0.47
NRXN1-223	ENST00000625891	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.1	□□□□□ -0.47
NRXN1-223	ENST00000625891	TMEM132A	Q24JP5	1023 aa		12.09	□□□□□ -0.47
NRXN1-223	ENST00000625891	EHBP1	Q8NDI1	1231 aa		12.09	□□□□□ -0.47
NRXN1-223	ENST00000625891	STK17A	Q9UEE5	414 aa		12.09	□□□□□ -0.47
NRXN1-223	ENST00000625891	INSM1	Q01101	510 aa	Predicted RBP	12.08	□□□□□ -0.48
NRXN1-223	ENST00000625891	C6orf229	H3BNL8	230 aa		12.07	□□□□□ -0.48
NRXN1-223	ENST00000625891	MS4A1	P11836	297 aa		12.07	□□□□□ -0.48
NRXN1-223	ENST00000625891	CCNYL3	P0C7X3	344 aa		12.06	□□□□□ -0.48
NRXN1-223	ENST00000625891	FAM117A	Q9C073	453 aa		12.06	□□□□□ -0.48
NRXN1-223	ENST00000625891	SSTR3	P32745	418 aa	Predicted RBP	12.05	□□□□□ -0.48
NRXN1-223	ENST00000625891	SH3BP2	P78314	561 aa		12.05	□□□□□ -0.48
NRXN1-223	ENST00000625891	SPIRE2	Q8WWL2	714 aa		12.04	□□□□□ -0.48
NRXN1-223	ENST00000625891	PLEKHG3	A1L390	1219 aa		12.03	□□□□□ -0.48
NRXN1-223	ENST00000625891	PTPRN	Q16849	979 aa		12.03	□□□□□ -0.48
NRXN1-223	ENST00000625891	WASF2	Q9Y6W5	498 aa		12.03	□□□□□ -0.48
NRXN1-223	ENST00000625891	NDUFV2	P19404	249 aa		12.02	□□□□□ -0.49
NRXN1-223	ENST00000625891	TRIM46	Q7Z4K8	759 aa		12.02	□□□□□ -0.49
NRXN1-223	ENST00000625891	EVA1B	Q9NVM1	165 aa		12.02	□□□□□ -0.49
NRXN1-223	ENST00000625891	CAPN5	O15484	640 aa	Predicted RBP	12.01	□□□□□ -0.49
NRXN1-223	ENST00000625891	IL27	Q8NEV9	243 aa		12.01	□□□□□ -0.49
NRXN1-223	ENST00000625891	MOXD2P	A6NHM9	499 aa		12	□□□□□ -0.49
NRXN1-223	ENST00000625891	BMP1	P13497	986 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms