RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
LINC00963-217ENST00000624009 SPATA31A6Q5VVP1 1343 aa18.08■□□□□ 0.49
LINC00963-217ENST00000624009 STK26Q9P289 416 aa18.08■□□□□ 0.48
LINC00963-217ENST00000624009 FMN2Q9NZ56 1722 aa18.07■□□□□ 0.48
LINC00963-217ENST00000624009 ADGRB2O60241 1585 aa18.06■□□□□ 0.48
LINC00963-217ENST00000624009 WAPLQ7Z5K2 1190 aa18.06■□□□□ 0.48
LINC00963-217ENST00000624009 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
LINC00963-217ENST00000624009 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
LINC00963-217ENST00000624009 LRRC59Q96AG4 307 aaKnown RBP18.04■□□□□ 0.48
LINC00963-217ENST00000624009 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
LINC00963-217ENST00000624009 PHF23Q9BUL5 403 aaPredicted RBP18.03■□□□□ 0.48
LINC00963-217ENST00000624009 SOS2Q07890 1332 aaPredicted RBP18.02■□□□□ 0.48
LINC00963-217ENST00000624009 ARHGEF28Q8N1W1 1705 aaKnown RBP18.02■□□□□ 0.48
LINC00963-217ENST00000624009 PRAM1Q96QH2 718 aa18.01■□□□□ 0.47
LINC00963-217ENST00000624009 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
LINC00963-217ENST00000624009 ILDR2Q71H61 639 aa18■□□□□ 0.47
LINC00963-217ENST00000624009 ANKARQ7Z5J8 1434 aa17.99■□□□□ 0.47
LINC00963-217ENST00000624009 ORAI2Q96SN7 254 aa17.99■□□□□ 0.47
LINC00963-217ENST00000624009 POGKQ9P215 609 aa17.99■□□□□ 0.47
LINC00963-217ENST00000624009 EIF3AQ14152 1382 aaKnown RBP17.99■□□□□ 0.47
LINC00963-217ENST00000624009 RGPD8O14715 1765 aaPredicted RBP17.99■□□□□ 0.47
LINC00963-217ENST00000624009 ESCO1Q5FWF5 840 aa17.97■□□□□ 0.47
LINC00963-217ENST00000624009 PNPLA6Q8IY17 1366 aa17.96■□□□□ 0.47
LINC00963-217ENST00000624009 TRAK1Q9UPV9 953 aa17.96■□□□□ 0.47
LINC00963-217ENST00000624009 COL22A1Q8NFW1 1626 aaPredicted RBP17.96■□□□□ 0.47
LINC00963-217ENST00000624009 PXDNQ92626 1479 aa17.95■□□□□ 0.46
LINC00963-217ENST00000624009 LRP6O75581 1613 aa17.95■□□□□ 0.46
LINC00963-217ENST00000624009 L3MBTL2Q969R5 705 aa17.95■□□□□ 0.46
LINC00963-217ENST00000624009 RGS17Q9UGC6 210 aaPredicted RBP17.94■□□□□ 0.46
LINC00963-217ENST00000624009 SOCS7O14512 581 aa17.93■□□□□ 0.46
LINC00963-217ENST00000624009 USP32Q8NFA0 1604 aa17.93■□□□□ 0.46
LINC00963-217ENST00000624009 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
LINC00963-217ENST00000624009 TRPM1Q7Z4N2 1603 aa17.92■□□□□ 0.46
LINC00963-217ENST00000624009 DDX17Q92841 729 aaKnown RBP17.92■□□□□ 0.46
LINC00963-217ENST00000624009 SIN3AQ96ST3 1273 aa17.92■□□□□ 0.46
LINC00963-217ENST00000624009 ITSN1Q15811 1721 aa17.92■□□□□ 0.46
LINC00963-217ENST00000624009 WASLO00401 505 aaPredicted RBP17.9■□□□□ 0.46
LINC00963-217ENST00000624009 FOXO3O43524 673 aa17.9■□□□□ 0.46
LINC00963-217ENST00000624009 SAFB2Q14151 953 aaKnown RBP eCLIP17.9■□□□□ 0.46
LINC00963-217ENST00000624009 PHF8Q9UPP1 1060 aa17.89■□□□□ 0.45
LINC00963-217ENST00000624009 NBPF1Q3BBV0 1214 aa17.88■□□□□ 0.45
LINC00963-217ENST00000624009 ZNF772Q68DY9 489 aaPredicted RBP17.88■□□□□ 0.45
LINC00963-217ENST00000624009 MARF1Q9Y4F3 1742 aaKnown RBP17.87■□□□□ 0.45
LINC00963-217ENST00000624009 NUTM2FA1L443 756 aa17.87■□□□□ 0.45
LINC00963-217ENST00000624009 MEX3CQ5U5Q3 659 aaKnown RBP17.87■□□□□ 0.45
LINC00963-217ENST00000624009 MINK1Q8N4C8 1332 aaPredicted RBP17.87■□□□□ 0.45
LINC00963-217ENST00000624009 PSME1Q06323 249 aa17.86■□□□□ 0.45
LINC00963-217ENST00000624009 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
LINC00963-217ENST00000624009 SBNO1A3KN83 1393 aa17.86■□□□□ 0.45
LINC00963-217ENST00000624009 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
LINC00963-217ENST00000624009 SPATA31A3Q5VYP0 1347 aa17.85■□□□□ 0.45
LINC00963-217ENST00000624009 ATP7BP35670 1465 aa17.84■□□□□ 0.45
LINC00963-217ENST00000624009 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
LINC00963-217ENST00000624009 TOPAZ1Q8N9V7 1692 aa17.83■□□□□ 0.45
LINC00963-217ENST00000624009 QRICH2Q9H0J4 1663 aa17.83■□□□□ 0.45
LINC00963-217ENST00000624009 TNS3Q68CZ2 1445 aa17.83■□□□□ 0.45
LINC00963-217ENST00000624009 TONSLQ96HA7 1378 aa17.83■□□□□ 0.45
LINC00963-217ENST00000624009 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
LINC00963-217ENST00000624009 POTEAQ6S8J7 498 aa17.83■□□□□ 0.44
LINC00963-217ENST00000624009 KRT28Q7Z3Y7 464 aa17.83■□□□□ 0.44
LINC00963-217ENST00000624009 TRPM3Q9HCF6 1732 aaPredicted RBP17.83■□□□□ 0.44
LINC00963-217ENST00000624009 ARHGEF10O15013 1369 aa17.82■□□□□ 0.44
LINC00963-217ENST00000624009 ROCK2O75116 1388 aaKnown RBP17.82■□□□□ 0.44
LINC00963-217ENST00000624009 PRR36Q9H6K5 1346 aa17.82■□□□□ 0.44
LINC00963-217ENST00000624009 NUTM2BA6NNL0 878 aaPredicted RBP17.82■□□□□ 0.44
LINC00963-217ENST00000624009 NUTM2EB1AL46 878 aaPredicted RBP17.82■□□□□ 0.44
LINC00963-217ENST00000624009 NUTM2AQ8IVF1 878 aaPredicted RBP17.82■□□□□ 0.44
LINC00963-217ENST00000624009 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
LINC00963-217ENST00000624009 ALS2Q96Q42 1657 aa17.8■□□□□ 0.44
LINC00963-217ENST00000624009 AFF2P51816 1311 aa17.79■□□□□ 0.44
LINC00963-217ENST00000624009 XPCQ01831 940 aaPredicted RBP17.79■□□□□ 0.44
LINC00963-217ENST00000624009 NUDT16Q96DE0 195 aaKnown RBP17.79■□□□□ 0.44
LINC00963-217ENST00000624009 CDK19Q9BWU1 502 aa17.79■□□□□ 0.44
LINC00963-217ENST00000624009 CCDC61Q9Y6R9 512 aa17.79■□□□□ 0.44
LINC00963-217ENST00000624009 RALGAPBQ86X10 1494 aa17.79■□□□□ 0.44
LINC00963-217ENST00000624009 CDK12Q9NYV4 1490 aaPredicted RBP17.79■□□□□ 0.44
LINC00963-217ENST00000624009 POLR3AO14802 1390 aaPredicted RBP17.78■□□□□ 0.44
LINC00963-217ENST00000624009 SBNO2Q9Y2G9 1366 aa17.78■□□□□ 0.44
LINC00963-217ENST00000624009 FNBP4Q8N3X1 1017 aaPredicted RBP17.77■□□□□ 0.44
LINC00963-217ENST00000624009 ABCA3Q99758 1704 aa17.77■□□□□ 0.44
LINC00963-217ENST00000624009 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.76■□□□□ 0.43
LINC00963-217ENST00000624009 PLEKHG3A1L390 1219 aa17.76■□□□□ 0.43
LINC00963-217ENST00000624009 NBPF8Q3BBV2 869 aa17.76■□□□□ 0.43
LINC00963-217ENST00000624009 PMFBP1Q8TBY8 1022 aa17.76■□□□□ 0.43
LINC00963-217ENST00000624009 C8orf37Q96NL8 207 aa17.76■□□□□ 0.43
LINC00963-217ENST00000624009 TIMELESSQ9UNS1 1208 aa17.76■□□□□ 0.43
LINC00963-217ENST00000624009 NGLY1Q96IV0 654 aa17.75■□□□□ 0.43
LINC00963-217ENST00000624009 BRD4O60885 1362 aaPredicted RBP17.75■□□□□ 0.43
LINC00963-217ENST00000624009 ADAMTS2O95450 1211 aa17.74■□□□□ 0.43
LINC00963-217ENST00000624009 NGDNQ8NEJ9 315 aaKnown RBP17.74■□□□□ 0.43
LINC00963-217ENST00000624009 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
LINC00963-217ENST00000624009 NWD2Q9ULI1 1742 aa17.72■□□□□ 0.43
LINC00963-217ENST00000624009 RXRBP28702 533 aa17.72■□□□□ 0.43
LINC00963-217ENST00000624009 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
LINC00963-217ENST00000624009 RBM6P78332 1123 aaKnown RBP17.71■□□□□ 0.43
LINC00963-217ENST00000624009 SLIT2O94813 1529 aa17.71■□□□□ 0.43
LINC00963-217ENST00000624009 SRPK2P78362 688 aaKnown RBP17.7■□□□□ 0.42
LINC00963-217ENST00000624009 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
LINC00963-217ENST00000624009 TRPC5Q9UL62 973 aaPredicted RBP17.7■□□□□ 0.42
LINC00963-217ENST00000624009 BCL9LQ86UU0 1499 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms