RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 DLC1Q96QB1 1528 aa28.03■■■□□ 2.08
PDLIM2-221ENST00000622702 CADPS2Q86UW7 1296 aa28.02■■■□□ 2.08
PDLIM2-221ENST00000622702 TRAK1Q9UPV9 953 aa28.02■■■□□ 2.08
PDLIM2-221ENST00000622702 USP47Q96K76 1375 aa28.02■■■□□ 2.08
PDLIM2-221ENST00000622702 SIRT1Q96EB6 747 aa28.02■■■□□ 2.08
PDLIM2-221ENST00000622702 SLAIN2Q9P270 581 aa28.01■■■□□ 2.07
PDLIM2-221ENST00000622702 EIF3AQ14152 1382 aaKnown RBP28■■■□□ 2.07
PDLIM2-221ENST00000622702 PLEKHH1Q9ULM0 1364 aa28■■■□□ 2.07
PDLIM2-221ENST00000622702 DCCP43146 1447 aa28■■■□□ 2.07
PDLIM2-221ENST00000622702 FAM135BQ49AJ0 1406 aa27.99■■■□□ 2.07
PDLIM2-221ENST00000622702 ARHGEF28Q8N1W1 1705 aaKnown RBP27.98■■■□□ 2.07
PDLIM2-221ENST00000622702 EIF4G2P78344 907 aaKnown RBP eCLIP27.98■■■□□ 2.07
PDLIM2-221ENST00000622702 PRAM1Q96QH2 718 aa27.96■■■□□ 2.07
PDLIM2-221ENST00000622702 POGKQ9P215 609 aa27.94■■■□□ 2.06
PDLIM2-221ENST00000622702 ROBO1Q9Y6N7 1651 aa27.93■■■□□ 2.06
PDLIM2-221ENST00000622702 CENPJQ9HC77 1338 aaPredicted RBP27.92■■■□□ 2.06
PDLIM2-221ENST00000622702 HSPA5P11021 654 aaKnown RBP27.92■■■□□ 2.06
PDLIM2-221ENST00000622702 SAFB2Q14151 953 aaKnown RBP eCLIP27.92■■■□□ 2.06
PDLIM2-221ENST00000622702 MST1RQ04912 1400 aa27.9■■■□□ 2.06
PDLIM2-221ENST00000622702 ST20-MTHFSA0A0A6YYL1 179 aa27.9■■■□□ 2.06
PDLIM2-221ENST00000622702 HSPA1LP34931 641 aa27.9■■■□□ 2.06
PDLIM2-221ENST00000622702 CDC42BPGQ6DT37 1551 aa27.89■■■□□ 2.05
PDLIM2-221ENST00000622702 SBNO2Q9Y2G9 1366 aa27.88■■■□□ 2.05
PDLIM2-221ENST00000622702 TESK2Q96S53 571 aa27.85■■■□□ 2.05
PDLIM2-221ENST00000622702 QRICH2Q9H0J4 1663 aa27.85■■■□□ 2.05
PDLIM2-221ENST00000622702 C1orf167Q5SNV9 1468 aa27.83■■■□□ 2.04
PDLIM2-221ENST00000622702 BRINP3Q76B58 766 aa27.83■■■□□ 2.04
PDLIM2-221ENST00000622702 SLC24A1O60721 1099 aa27.82■■■□□ 2.04
PDLIM2-221ENST00000622702 MINK1Q8N4C8 1332 aaPredicted RBP27.82■■■□□ 2.04
PDLIM2-221ENST00000622702 NUTM2FA1L443 756 aa27.8■■■□□ 2.04
PDLIM2-221ENST00000622702 HIRIP3Q9BW71 556 aaPredicted RBP27.8■■■□□ 2.04
PDLIM2-221ENST00000622702 FMN2Q9NZ56 1722 aa27.8■■■□□ 2.04
PDLIM2-221ENST00000622702 ADGRB2O60241 1585 aa27.78■■■□□ 2.04
PDLIM2-221ENST00000622702 ORAI2Q96SN7 254 aa27.76■■■□□ 2.04
PDLIM2-221ENST00000622702 PHLPP1O60346 1717 aa27.76■■■□□ 2.03
PDLIM2-221ENST00000622702 ESCO1Q5FWF5 840 aa27.74■■■□□ 2.03
PDLIM2-221ENST00000622702 TMF1P82094 1093 aa27.73■■■□□ 2.03
PDLIM2-221ENST00000622702 AHDC1Q5TGY3 1603 aaPredicted RBP27.73■■■□□ 2.03
PDLIM2-221ENST00000622702 TULP4Q9NRJ4 1543 aa27.72■■■□□ 2.03
PDLIM2-221ENST00000622702 EVC2Q86UK5 1308 aa27.72■■■□□ 2.03
PDLIM2-221ENST00000622702 WASLO00401 505 aaPredicted RBP27.71■■■□□ 2.03
PDLIM2-221ENST00000622702 RGPD8O14715 1765 aaPredicted RBP27.71■■■□□ 2.03
PDLIM2-221ENST00000622702 NHSL1Q5SYE7 1610 aa27.71■■■□□ 2.03
PDLIM2-221ENST00000622702 DISP3Q9P2K9 1392 aa27.7■■■□□ 2.03
PDLIM2-221ENST00000622702 DDX17Q92841 729 aaKnown RBP27.69■■■□□ 2.02
PDLIM2-221ENST00000622702 COL16A1Q07092 1604 aaPredicted RBP27.69■■■□□ 2.02
PDLIM2-221ENST00000622702 USP32Q8NFA0 1604 aa27.66■■■□□ 2.02
PDLIM2-221ENST00000622702 CDCA8Q53HL2 280 aa27.66■■■□□ 2.02
PDLIM2-221ENST00000622702 PUS7Q96PZ0 661 aaKnown RBP27.66■■■□□ 2.02
PDLIM2-221ENST00000622702 CDK19Q9BWU1 502 aa27.66■■■□□ 2.02
PDLIM2-221ENST00000622702 ANKARQ7Z5J8 1434 aa27.66■■■□□ 2.02
PDLIM2-221ENST00000622702 C11orf95C9JLR9 678 aaPredicted RBP27.65■■■□□ 2.02
PDLIM2-221ENST00000622702 PRR36Q9H6K5 1346 aa27.62■■■□□ 2.01
PDLIM2-221ENST00000622702 ZNF316A6NFI3 1004 aaPredicted RBP27.62■■■□□ 2.01
PDLIM2-221ENST00000622702 FOXO3O43524 673 aa27.62■■■□□ 2.01
PDLIM2-221ENST00000622702 SRPK2P78362 688 aaKnown RBP27.62■■■□□ 2.01
PDLIM2-221ENST00000622702 PHF8Q9UPP1 1060 aa27.62■■■□□ 2.01
PDLIM2-221ENST00000622702 KIF1AQ12756 1690 aa27.62■■■□□ 2.01
PDLIM2-221ENST00000622702 CABP2Q9NPB3 220 aa27.6■■■□□ 2.01
PDLIM2-221ENST00000622702 KIF7Q2M1P5 1343 aa27.6■■■□□ 2.01
PDLIM2-221ENST00000622702 NPHP3Q7Z494 1330 aa27.6■■■□□ 2.01
PDLIM2-221ENST00000622702 NUDT16Q96DE0 195 aaKnown RBP27.59■■■□□ 2.01
PDLIM2-221ENST00000622702 CCDC7Q96M83 1385 aa27.59■■■□□ 2.01
PDLIM2-221ENST00000622702 WASHC2AQ641Q2 1341 aa27.58■■■□□ 2.01
PDLIM2-221ENST00000622702 ATAD2Q6PL18 1390 aa27.58■■■□□ 2.01
PDLIM2-221ENST00000622702 JCADQ9P266 1359 aa27.58■■■□□ 2.01
PDLIM2-221ENST00000622702 PMFBP1Q8TBY8 1022 aa27.57■■■□□ 2
PDLIM2-221ENST00000622702 SOS2Q07890 1332 aaPredicted RBP27.57■■■□□ 2
PDLIM2-221ENST00000622702 ATP7BP35670 1465 aa27.57■■■□□ 2
PDLIM2-221ENST00000622702 LRRC59Q96AG4 307 aaKnown RBP27.57■■■□□ 2
PDLIM2-221ENST00000622702 XPCQ01831 940 aaPredicted RBP27.56■■■□□ 2
PDLIM2-221ENST00000622702 ITSN1Q15811 1721 aa27.56■■■□□ 2
PDLIM2-221ENST00000622702 PXDNQ92626 1479 aa27.54■■■□□ 2
PDLIM2-221ENST00000622702 CCDC61Q9Y6R9 512 aa27.53■■■□□ 2
PDLIM2-221ENST00000622702 SHPRHQ149N8 1683 aa27.52■■■□□ 2
PDLIM2-221ENST00000622702 KRT28Q7Z3Y7 464 aa27.51■■□□□ 1.99
PDLIM2-221ENST00000622702 TOPAZ1Q8N9V7 1692 aa27.5■■□□□ 1.99
PDLIM2-221ENST00000622702 NINLQ9Y2I6 1382 aa27.5■■□□□ 1.99
PDLIM2-221ENST00000622702 PSME1Q06323 249 aa27.5■■□□□ 1.99
PDLIM2-221ENST00000622702 POLR3GLQ9BT43 218 aa27.5■■□□□ 1.99
PDLIM2-221ENST00000622702 NGDNQ8NEJ9 315 aaKnown RBP27.49■■□□□ 1.99
PDLIM2-221ENST00000622702 MED1Q15648 1581 aaPredicted RBP27.48■■□□□ 1.99
PDLIM2-221ENST00000622702 PPIP5K1Q6PFW1 1433 aa27.47■■□□□ 1.99
PDLIM2-221ENST00000622702 MYOM1P52179 1685 aa27.46■■□□□ 1.99
PDLIM2-221ENST00000622702 PNPLA6Q8IY17 1366 aa27.46■■□□□ 1.99
PDLIM2-221ENST00000622702 PLEKHG3A1L390 1219 aa27.45■■□□□ 1.99
PDLIM2-221ENST00000622702 SPATA31A6Q5VVP1 1343 aa27.45■■□□□ 1.98
PDLIM2-221ENST00000622702 CABP1Q9NZU7 370 aa27.44■■□□□ 1.98
PDLIM2-221ENST00000622702 TMC1Q8TDI8 760 aa27.44■■□□□ 1.98
PDLIM2-221ENST00000622702 SLC12A5Q9H2X9 1139 aa27.44■■□□□ 1.98
PDLIM2-221ENST00000622702 ACEP12821 1306 aa27.42■■□□□ 1.98
PDLIM2-221ENST00000622702 SPATA31A3Q5VYP0 1347 aa27.42■■□□□ 1.98
PDLIM2-221ENST00000622702 POLR3AO14802 1390 aaPredicted RBP27.4■■□□□ 1.98
PDLIM2-221ENST00000622702 NUTM2BA6NNL0 878 aaPredicted RBP27.4■■□□□ 1.98
PDLIM2-221ENST00000622702 NUTM2EB1AL46 878 aaPredicted RBP27.4■■□□□ 1.98
PDLIM2-221ENST00000622702 NUTM2AQ8IVF1 878 aaPredicted RBP27.4■■□□□ 1.98
PDLIM2-221ENST00000622702 SBNO1A3KN83 1393 aa27.4■■□□□ 1.98
PDLIM2-221ENST00000622702 TNS3Q68CZ2 1445 aa27.39■■□□□ 1.97
PDLIM2-221ENST00000622702 CD163L1Q9NR16 1453 aa27.38■■□□□ 1.97
PDLIM2-221ENST00000622702 TRPM3Q9HCF6 1732 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms