RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 TRAK1Q9UPV9 953 aa19.22■□□□□ 0.67
MUC1-229ENST00000620770 ROBO2Q9HCK4 1378 aa19.21■□□□□ 0.67
MUC1-229ENST00000620770 ATF3P18847 181 aa19.21■□□□□ 0.67
MUC1-229ENST00000620770 NALCNQ8IZF0 1738 aa19.21■□□□□ 0.67
MUC1-229ENST00000620770 C19orf44Q9H6X5 657 aa19.21■□□□□ 0.67
MUC1-229ENST00000620770 AHDC1Q5TGY3 1603 aaPredicted RBP19.21■□□□□ 0.67
MUC1-229ENST00000620770 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
MUC1-229ENST00000620770 PTCH1Q13635 1447 aa19.2■□□□□ 0.66
MUC1-229ENST00000620770 ABCC11Q96J66 1382 aa19.19■□□□□ 0.66
MUC1-229ENST00000620770 CARD11Q9BXL7 1154 aa19.19■□□□□ 0.66
MUC1-229ENST00000620770 TECPR2O15040 1411 aa19.18■□□□□ 0.66
MUC1-229ENST00000620770 PLEKHH1Q9ULM0 1364 aa19.18■□□□□ 0.66
MUC1-229ENST00000620770 SAFB2Q14151 953 aaKnown RBP eCLIP19.17■□□□□ 0.66
MUC1-229ENST00000620770 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
MUC1-229ENST00000620770 PRAM1Q96QH2 718 aa19.17■□□□□ 0.66
MUC1-229ENST00000620770 GPRASP1Q5JY77 1395 aa19.17■□□□□ 0.66
MUC1-229ENST00000620770 JCADQ9P266 1359 aa19.17■□□□□ 0.66
MUC1-229ENST00000620770 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
MUC1-229ENST00000620770 POGKQ9P215 609 aa19.16■□□□□ 0.66
MUC1-229ENST00000620770 SHPRHQ149N8 1683 aa19.16■□□□□ 0.66
MUC1-229ENST00000620770 DLC1Q96QB1 1528 aa19.15■□□□□ 0.66
MUC1-229ENST00000620770 ARHGEF28Q8N1W1 1705 aaKnown RBP19.14■□□□□ 0.66
MUC1-229ENST00000620770 NHSL1Q5SYE7 1610 aa19.14■□□□□ 0.65
MUC1-229ENST00000620770 MST1RQ04912 1400 aa19.12■□□□□ 0.65
MUC1-229ENST00000620770 EIF3AQ14152 1382 aaKnown RBP19.11■□□□□ 0.65
MUC1-229ENST00000620770 MINK1Q8N4C8 1332 aaPredicted RBP19.09■□□□□ 0.65
MUC1-229ENST00000620770 BRINP3Q76B58 766 aa19.09■□□□□ 0.65
MUC1-229ENST00000620770 SIRT1Q96EB6 747 aa19.09■□□□□ 0.65
MUC1-229ENST00000620770 USP47Q96K76 1375 aa19.08■□□□□ 0.65
MUC1-229ENST00000620770 CENPJQ9HC77 1338 aaPredicted RBP19.08■□□□□ 0.65
MUC1-229ENST00000620770 HIRIP3Q9BW71 556 aaPredicted RBP19.08■□□□□ 0.64
MUC1-229ENST00000620770 SPATA31A6Q5VVP1 1343 aa19.07■□□□□ 0.64
MUC1-229ENST00000620770 RGS17Q9UGC6 210 aaPredicted RBP19.07■□□□□ 0.64
MUC1-229ENST00000620770 QRICH2Q9H0J4 1663 aa19.06■□□□□ 0.64
MUC1-229ENST00000620770 ZEB1P37275 1124 aaPredicted RBP19.05■□□□□ 0.64
MUC1-229ENST00000620770 LRP6O75581 1613 aa19.04■□□□□ 0.64
MUC1-229ENST00000620770 CDC42BPGQ6DT37 1551 aa19.03■□□□□ 0.64
MUC1-229ENST00000620770 C1orf167Q5SNV9 1468 aa19.02■□□□□ 0.63
MUC1-229ENST00000620770 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
MUC1-229ENST00000620770 NUTM2FA1L443 756 aa19.01■□□□□ 0.63
MUC1-229ENST00000620770 MEX3CQ5U5Q3 659 aaKnown RBP19.01■□□□□ 0.63
MUC1-229ENST00000620770 ADGRB2O60241 1585 aa19.01■□□□□ 0.63
MUC1-229ENST00000620770 EIF4G2P78344 907 aaKnown RBP eCLIP18.99■□□□□ 0.63
MUC1-229ENST00000620770 HSPA5P11021 654 aaKnown RBP18.98■□□□□ 0.63
MUC1-229ENST00000620770 POTEAQ6S8J7 498 aa18.98■□□□□ 0.63
MUC1-229ENST00000620770 WASLO00401 505 aaPredicted RBP18.97■□□□□ 0.63
MUC1-229ENST00000620770 FMN2Q9NZ56 1722 aa18.97■□□□□ 0.63
MUC1-229ENST00000620770 TULP4Q9NRJ4 1543 aa18.96■□□□□ 0.63
MUC1-229ENST00000620770 LRRC59Q96AG4 307 aaKnown RBP18.96■□□□□ 0.63
MUC1-229ENST00000620770 SRPK2P78362 688 aaKnown RBP18.95■□□□□ 0.62
MUC1-229ENST00000620770 CDK19Q9BWU1 502 aa18.95■□□□□ 0.62
MUC1-229ENST00000620770 SBNO2Q9Y2G9 1366 aa18.94■□□□□ 0.62
MUC1-229ENST00000620770 EVC2Q86UK5 1308 aa18.94■□□□□ 0.62
MUC1-229ENST00000620770 PNPLA6Q8IY17 1366 aa18.93■□□□□ 0.62
MUC1-229ENST00000620770 TESK2Q96S53 571 aa18.93■□□□□ 0.62
MUC1-229ENST00000620770 CABP2Q9NPB3 220 aa18.93■□□□□ 0.62
MUC1-229ENST00000620770 NUTM2BA6NNL0 878 aaPredicted RBP18.92■□□□□ 0.62
MUC1-229ENST00000620770 NUTM2EB1AL46 878 aaPredicted RBP18.92■□□□□ 0.62
MUC1-229ENST00000620770 ZNF772Q68DY9 489 aaPredicted RBP18.92■□□□□ 0.62
MUC1-229ENST00000620770 NUTM2AQ8IVF1 878 aaPredicted RBP18.92■□□□□ 0.62
MUC1-229ENST00000620770 DDX17Q92841 729 aaKnown RBP18.92■□□□□ 0.62
MUC1-229ENST00000620770 PRR36Q9H6K5 1346 aa18.91■□□□□ 0.62
MUC1-229ENST00000620770 KIF1AQ12756 1690 aa18.91■□□□□ 0.62
MUC1-229ENST00000620770 USP32Q8NFA0 1604 aa18.9■□□□□ 0.62
MUC1-229ENST00000620770 ESCO1Q5FWF5 840 aa18.9■□□□□ 0.62
MUC1-229ENST00000620770 ORAI2Q96SN7 254 aa18.9■□□□□ 0.62
MUC1-229ENST00000620770 COL22A1Q8NFW1 1626 aaPredicted RBP18.89■□□□□ 0.62
MUC1-229ENST00000620770 TMF1P82094 1093 aa18.89■□□□□ 0.61
MUC1-229ENST00000620770 NUDT16Q96DE0 195 aaKnown RBP18.89■□□□□ 0.61
MUC1-229ENST00000620770 ANKARQ7Z5J8 1434 aa18.89■□□□□ 0.61
MUC1-229ENST00000620770 ATP7BP35670 1465 aa18.89■□□□□ 0.61
MUC1-229ENST00000620770 SOS2Q07890 1332 aaPredicted RBP18.88■□□□□ 0.61
MUC1-229ENST00000620770 RGPD8O14715 1765 aaPredicted RBP18.87■□□□□ 0.61
MUC1-229ENST00000620770 NPHP3Q7Z494 1330 aa18.87■□□□□ 0.61
MUC1-229ENST00000620770 POLR3GLQ9BT43 218 aa18.87■□□□□ 0.61
MUC1-229ENST00000620770 PXDNQ92626 1479 aa18.85■□□□□ 0.61
MUC1-229ENST00000620770 AFF2P51816 1311 aa18.85■□□□□ 0.61
MUC1-229ENST00000620770 PMFBP1Q8TBY8 1022 aa18.85■□□□□ 0.61
MUC1-229ENST00000620770 MARF1Q9Y4F3 1742 aaKnown RBP18.85■□□□□ 0.61
MUC1-229ENST00000620770 SLC24A1O60721 1099 aa18.84■□□□□ 0.61
MUC1-229ENST00000620770 PHF8Q9UPP1 1060 aa18.84■□□□□ 0.61
MUC1-229ENST00000620770 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.61
MUC1-229ENST00000620770 ITSN1Q15811 1721 aa18.83■□□□□ 0.61
MUC1-229ENST00000620770 ATAD2Q6PL18 1390 aa18.83■□□□□ 0.61
MUC1-229ENST00000620770 TOPAZ1Q8N9V7 1692 aa18.83■□□□□ 0.61
MUC1-229ENST00000620770 CCDC61Q9Y6R9 512 aa18.83■□□□□ 0.6
MUC1-229ENST00000620770 C8orf37Q96NL8 207 aa18.82■□□□□ 0.6
MUC1-229ENST00000620770 CDK12Q9NYV4 1490 aaPredicted RBP18.82■□□□□ 0.6
MUC1-229ENST00000620770 CDCA8Q53HL2 280 aa18.81■□□□□ 0.6
MUC1-229ENST00000620770 TMC1Q8TDI8 760 aa18.81■□□□□ 0.6
MUC1-229ENST00000620770 FOXO3O43524 673 aa18.8■□□□□ 0.6
MUC1-229ENST00000620770 XPCQ01831 940 aaPredicted RBP18.8■□□□□ 0.6
MUC1-229ENST00000620770 NGDNQ8NEJ9 315 aaKnown RBP18.8■□□□□ 0.6
MUC1-229ENST00000620770 CABP1Q9NZU7 370 aa18.8■□□□□ 0.6
MUC1-229ENST00000620770 RXRBP28702 533 aa18.79■□□□□ 0.6
MUC1-229ENST00000620770 C11orf95C9JLR9 678 aaPredicted RBP18.78■□□□□ 0.6
MUC1-229ENST00000620770 ADAMTS2O95450 1211 aa18.78■□□□□ 0.6
MUC1-229ENST00000620770 ACEP12821 1306 aa18.76■□□□□ 0.59
MUC1-229ENST00000620770 NGLY1Q96IV0 654 aa18.76■□□□□ 0.59
MUC1-229ENST00000620770 SLC12A5Q9H2X9 1139 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms