RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
TARDBP-223ENST00000620632 CCER1Q8TC90 406 aaPredicted RBP15.54■□□□□ 0.08
TARDBP-223ENST00000620632 SIRT1Q96EB6 747 aa15.53■□□□□ 0.08
TARDBP-223ENST00000620632 PRAM1Q96QH2 718 aa15.53■□□□□ 0.08
TARDBP-223ENST00000620632 RGPD8O14715 1765 aaPredicted RBP15.53■□□□□ 0.08
TARDBP-223ENST00000620632 FMN2Q9NZ56 1722 aa15.53■□□□□ 0.08
TARDBP-223ENST00000620632 ADGRB2O60241 1585 aa15.51■□□□□ 0.07
TARDBP-223ENST00000620632 ATF3P18847 181 aa15.51■□□□□ 0.07
TARDBP-223ENST00000620632 SAFB2Q14151 953 aaKnown RBP eCLIP15.51■□□□□ 0.07
TARDBP-223ENST00000620632 CADPS2Q86UW7 1296 aa15.51■□□□□ 0.07
TARDBP-223ENST00000620632 SLAIN2Q9P270 581 aa15.51■□□□□ 0.07
TARDBP-223ENST00000620632 RALGAPBQ86X10 1494 aa15.51■□□□□ 0.07
TARDBP-223ENST00000620632 QRICH2Q9H0J4 1663 aa15.49■□□□□ 0.07
TARDBP-223ENST00000620632 ROCK2O75116 1388 aaKnown RBP15.49■□□□□ 0.07
TARDBP-223ENST00000620632 GPRASP1Q5JY77 1395 aa15.49■□□□□ 0.07
TARDBP-223ENST00000620632 C1orf167Q5SNV9 1468 aa15.48■□□□□ 0.07
TARDBP-223ENST00000620632 USP32Q8NFA0 1604 aa15.48■□□□□ 0.07
TARDBP-223ENST00000620632 HSPA1LP34931 641 aa15.48■□□□□ 0.07
TARDBP-223ENST00000620632 PHLPP1O60346 1717 aa15.48■□□□□ 0.07
TARDBP-223ENST00000620632 NHSL1Q5SYE7 1610 aa15.47■□□□□ 0.07
TARDBP-223ENST00000620632 POGKQ9P215 609 aa15.47■□□□□ 0.07
TARDBP-223ENST00000620632 BRINP3Q76B58 766 aa15.46■□□□□ 0.07
TARDBP-223ENST00000620632 MINK1Q8N4C8 1332 aaPredicted RBP15.45■□□□□ 0.06
TARDBP-223ENST00000620632 HIRIP3Q9BW71 556 aaPredicted RBP15.45■□□□□ 0.06
TARDBP-223ENST00000620632 COL16A1Q07092 1604 aaPredicted RBP15.45■□□□□ 0.06
TARDBP-223ENST00000620632 AHDC1Q5TGY3 1603 aaPredicted RBP15.45■□□□□ 0.06
TARDBP-223ENST00000620632 NUTM2FA1L443 756 aa15.44■□□□□ 0.06
TARDBP-223ENST00000620632 ORAI2Q96SN7 254 aa15.43■□□□□ 0.06
TARDBP-223ENST00000620632 TIMELESSQ9UNS1 1208 aa15.42■□□□□ 0.06
TARDBP-223ENST00000620632 DDX17Q92841 729 aaKnown RBP15.41■□□□□ 0.06
TARDBP-223ENST00000620632 TULP4Q9NRJ4 1543 aa15.41■□□□□ 0.06
TARDBP-223ENST00000620632 CENPJQ9HC77 1338 aaPredicted RBP15.41■□□□□ 0.06
TARDBP-223ENST00000620632 CARD11Q9BXL7 1154 aa15.4■□□□□ 0.06
TARDBP-223ENST00000620632 PRR36Q9H6K5 1346 aa15.4■□□□□ 0.06
TARDBP-223ENST00000620632 KIF1AQ12756 1690 aa15.39■□□□□ 0.05
TARDBP-223ENST00000620632 TOPAZ1Q8N9V7 1692 aa15.39■□□□□ 0.05
TARDBP-223ENST00000620632 ITSN1Q15811 1721 aa15.38■□□□□ 0.05
TARDBP-223ENST00000620632 WASLO00401 505 aaPredicted RBP15.38■□□□□ 0.05
TARDBP-223ENST00000620632 ATP7BP35670 1465 aa15.38■□□□□ 0.05
TARDBP-223ENST00000620632 ANKARQ7Z5J8 1434 aa15.37■□□□□ 0.05
TARDBP-223ENST00000620632 ESCO1Q5FWF5 840 aa15.37■□□□□ 0.05
TARDBP-223ENST00000620632 EIF3AQ14152 1382 aaKnown RBP15.36■□□□□ 0.05
TARDBP-223ENST00000620632 SHPRHQ149N8 1683 aa15.35■□□□□ 0.05
TARDBP-223ENST00000620632 PXDNQ92626 1479 aa15.35■□□□□ 0.05
TARDBP-223ENST00000620632 CDK19Q9BWU1 502 aa15.35■□□□□ 0.05
TARDBP-223ENST00000620632 TRPM3Q9HCF6 1732 aaPredicted RBP15.32■□□□□ 0.04
TARDBP-223ENST00000620632 FOXO3O43524 673 aa15.32■□□□□ 0.04
TARDBP-223ENST00000620632 PHF8Q9UPP1 1060 aa15.32■□□□□ 0.04
TARDBP-223ENST00000620632 SOS2Q07890 1332 aaPredicted RBP15.32■□□□□ 0.04
TARDBP-223ENST00000620632 USP47Q96K76 1375 aa15.32■□□□□ 0.04
TARDBP-223ENST00000620632 SBNO2Q9Y2G9 1366 aa15.32■□□□□ 0.04
TARDBP-223ENST00000620632 XPCQ01831 940 aaPredicted RBP15.31■□□□□ 0.04
TARDBP-223ENST00000620632 PMFBP1Q8TBY8 1022 aa15.31■□□□□ 0.04
TARDBP-223ENST00000620632 NUDT16Q96DE0 195 aaKnown RBP15.31■□□□□ 0.04
TARDBP-223ENST00000620632 CABP2Q9NPB3 220 aa15.31■□□□□ 0.04
TARDBP-223ENST00000620632 MED1Q15648 1581 aaPredicted RBP15.31■□□□□ 0.04
TARDBP-223ENST00000620632 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
TARDBP-223ENST00000620632 TESK2Q96S53 571 aa15.3■□□□□ 0.04
TARDBP-223ENST00000620632 JCADQ9P266 1359 aa15.29■□□□□ 0.04
TARDBP-223ENST00000620632 NPHP3Q7Z494 1330 aa15.29■□□□□ 0.04
TARDBP-223ENST00000620632 SRPK2P78362 688 aaKnown RBP15.28■□□□□ 0.04
TARDBP-223ENST00000620632 COL22A1Q8NFW1 1626 aaPredicted RBP15.28■□□□□ 0.04
TARDBP-223ENST00000620632 PNPLA6Q8IY17 1366 aa15.27■□□□□ 0.04
TARDBP-223ENST00000620632 EVC2Q86UK5 1308 aa15.27■□□□□ 0.04
TARDBP-223ENST00000620632 ALS2Q96Q42 1657 aa15.27■□□□□ 0.03
TARDBP-223ENST00000620632 LRP6O75581 1613 aa15.27■□□□□ 0.03
TARDBP-223ENST00000620632 PPIP5K1Q6PFW1 1433 aa15.26■□□□□ 0.03
TARDBP-223ENST00000620632 AKAP12Q02952 1782 aa15.26■□□□□ 0.03
TARDBP-223ENST00000620632 POLR3AO14802 1390 aaPredicted RBP15.25■□□□□ 0.03
TARDBP-223ENST00000620632 KRT28Q7Z3Y7 464 aa15.25■□□□□ 0.03
TARDBP-223ENST00000620632 LRRC59Q96AG4 307 aaKnown RBP15.25■□□□□ 0.03
TARDBP-223ENST00000620632 CCDC61Q9Y6R9 512 aa15.25■□□□□ 0.03
TARDBP-223ENST00000620632 DISP3Q9P2K9 1392 aa15.24■□□□□ 0.03
TARDBP-223ENST00000620632 ABCA3Q99758 1704 aa15.24■□□□□ 0.03
TARDBP-223ENST00000620632 ACEP12821 1306 aa15.23■□□□□ 0.03
TARDBP-223ENST00000620632 PLEKHG3A1L390 1219 aa15.23■□□□□ 0.03
TARDBP-223ENST00000620632 TNS3Q68CZ2 1445 aa15.23■□□□□ 0.03
TARDBP-223ENST00000620632 CRYBG1Q9Y4K1 1723 aa15.23■□□□□ 0.03
TARDBP-223ENST00000620632 SPATA31A3Q5VYP0 1347 aa15.22■□□□□ 0.03
TARDBP-223ENST00000620632 CABP1Q9NZU7 370 aa15.22■□□□□ 0.03
TARDBP-223ENST00000620632 MON2Q7Z3U7 1717 aa15.22■□□□□ 0.03
TARDBP-223ENST00000620632 SBNO1A3KN83 1393 aa15.22■□□□□ 0.03
TARDBP-223ENST00000620632 MARF1Q9Y4F3 1742 aaKnown RBP15.21■□□□□ 0.03
TARDBP-223ENST00000620632 NRKQ7Z2Y5 1582 aa15.21■□□□□ 0.03
TARDBP-223ENST00000620632 PSME1Q06323 249 aa15.21■□□□□ 0.03
TARDBP-223ENST00000620632 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.03
TARDBP-223ENST00000620632 ATAD2Q6PL18 1390 aa15.21■□□□□ 0.02
TARDBP-223ENST00000620632 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
TARDBP-223ENST00000620632 SPATA31A6Q5VVP1 1343 aa15.2■□□□□ 0.02
TARDBP-223ENST00000620632 MYOM1P52179 1685 aa15.2■□□□□ 0.02
TARDBP-223ENST00000620632 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
TARDBP-223ENST00000620632 NUTM2BA6NNL0 878 aaPredicted RBP15.18■□□□□ 0.02
TARDBP-223ENST00000620632 NUTM2EB1AL46 878 aaPredicted RBP15.18■□□□□ 0.02
TARDBP-223ENST00000620632 NUTM2AQ8IVF1 878 aaPredicted RBP15.18■□□□□ 0.02
TARDBP-223ENST00000620632 USP6P35125 1406 aa15.17■□□□□ 0.02
TARDBP-223ENST00000620632 CPSF1Q10570 1443 aaKnown RBP15.17■□□□□ 0.02
TARDBP-223ENST00000620632 SSH2Q76I76 1423 aa15.17■□□□□ 0.02
TARDBP-223ENST00000620632 PIK3C2AO00443 1686 aa15.17■□□□□ 0.02
TARDBP-223ENST00000620632 EIF4G2P78344 907 aaKnown RBP eCLIP15.17■□□□□ 0.028e-11■■□□□ 12.1
TARDBP-223ENST00000620632 PHRF1Q9P1Y6 1649 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms